Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HCFC1R1 Gene 0 54.51 51.75 157.85 51.37 49.12 137.76 42.54 101.28 97.34 99.02 102.81 23.95 32.91 88.98 112.26 93.38 67.67 144.79 184.71 88.33 278.98 82.88 344.19 2 248089 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 354679 Transcript 0 6.89 11.71 96.98 9.66 8.23 18.11 0.00 17.42 15.42 31.91 11.90 7.65 6.82 9.24 24.35 15.04 4.77 26.03 19.86 16.62 2.84 0.00 7.94 4 396916 Transcript 0 0.00 8.62 7.13 2.06 3.99 0.00 0.00 7.68 0.00 0.00 6.79 0.00 6.82 4.83 0.00 0.00 4.77 9.24 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 1 45.47 13.56 10.07 4.17 15.45 22.58 20.43 6.46 0.72 5.98 18.98 0.00 1.33 24.78 30.52 28.96 4.36 19.07 28.28 13.83 4.45 9.45 14.54 6 E1_Da KnownBoundary 0 32.89 7.76 34.48 22.51 0.00 12.44 7.42 17.00 12.36 22.11 18.53 0.00 0.00 22.25 26.95 18.11 16.08 44.11 8.56 16.36 7.29 12.80 8.71 7 E1a_E1b KnownJunction 0 0.00 8.62 7.13 2.06 3.99 0.00 0.00 7.68 0.00 0.00 6.79 0.00 6.82 4.83 0.00 0.00 4.77 9.24 0.00 0.00 0.00 0.00 0.00 8 ER1b ExonRegion 0 15.06 8.44 28.89 4.50 6.92 18.77 7.88 16.69 6.87 13.64 25.24 8.03 5.13 30.90 35.97 21.22 15.47 29.85 25.30 15.32 20.30 9.39 19.62 9 E1_Ab KnownBoundary 0 31.56 52.75 125.42 19.88 55.09 156.78 26.94 42.88 29.28 38.82 69.81 26.71 13.31 50.09 66.14 90.40 31.98 109.48 80.94 55.16 39.78 15.00 44.13 10 ER1c ExonRegion 0 97.55 152.70 220.76 67.32 89.38 488.55 112.33 148.23 138.95 145.04 142.84 26.98 30.47 122.47 125.90 178.30 86.40 371.46 420.65 138.95 312.40 160.95 1114.69 11 E1b_E2a KnownJunction 1 17.34 5.92 63.81 5.26 7.98 10.33 2.25 45.39 40.25 49.94 164.88 19.21 25.97 87.53 83.57 23.84 130.90 44.19 13.65 31.26 254.46 31.05 95.35 12 E1b_E3a KnownJunction 0 6.89 11.71 96.98 9.66 8.23 18.11 0.00 17.42 15.42 31.91 11.90 7.65 6.82 9.24 24.35 15.04 4.77 26.03 19.86 16.62 2.84 0.00 7.94 13 I1 Intron 0 15.71 3.94 21.51 4.26 5.18 18.65 5.77 13.30 14.56 10.48 12.16 0.00 0.00 11.41 7.57 12.00 7.99 11.86 6.68 6.18 11.03 11.77 15.17 14 I1_AR1 ActiveIntronRegion 0 15.81 3.96 21.65 4.29 5.22 18.76 5.81 13.39 14.64 10.55 12.24 0.00 0.00 11.47 7.62 12.08 8.03 11.94 6.73 6.22 11.10 11.84 15.26 15 E2_Aa NovelBoundary 0 21.63 9.08 44.79 3.66 12.31 10.05 3.97 32.78 32.61 21.09 12.00 6.30 0.00 16.54 13.97 37.34 17.77 18.45 31.91 18.09 15.57 26.39 20.40 16 ER2a ExonRegion 0 31.38 5.17 76.21 16.00 1.92 17.79 3.41 57.89 52.33 52.70 119.77 15.19 17.94 98.67 95.69 46.82 71.87 42.60 53.26 53.79 398.83 49.02 87.58 17 E2_Da NovelBoundary 1 34.38 16.05 49.08 16.91 6.88 8.12 1.90 39.51 39.55 29.33 13.06 10.80 18.18 26.19 18.91 59.56 0.00 46.10 29.37 8.25 21.00 19.35 61.12 18 E2a_E3a KnownJunction 0 59.86 2.83 134.06 27.74 3.31 5.56 8.66 95.87 90.16 61.46 112.13 12.60 25.97 81.17 71.57 51.44 69.94 71.92 171.39 67.69 445.29 61.85 118.91 19 I2 Intron 1 15.42 4.63 11.66 4.62 4.87 5.85 3.01 11.73 8.38 8.56 22.04 0.00 1.76 7.87 18.81 6.77 12.02 6.70 11.60 8.72 32.11 9.49 14.71 20 I2_AR1 ActiveIntronRegion 1 15.68 4.71 11.87 4.71 4.96 5.95 3.06 11.93 8.53 8.72 22.42 0.00 1.79 8.00 19.15 6.89 12.24 6.82 11.81 8.88 32.67 9.64 14.98 21 E3_Aa NovelBoundary 0 16.82 6.45 77.17 11.82 26.74 25.27 8.35 40.33 32.00 46.36 16.32 5.70 6.66 14.83 38.07 15.72 9.07 37.93 16.57 33.43 30.58 15.31 23.30 22 ER3a ExonRegion 0 116.84 50.15 342.86 111.20 90.83 137.34 45.79 240.93 224.58 222.37 204.62 45.85 76.89 171.17 215.43 243.85 143.42 354.70 471.04 198.86 506.60 203.75 1034.90 23 E3a_E4a KnownJunction 0 14.15 45.98 324.59 109.78 157.98 255.31 103.30 197.81 196.32 198.89 164.52 43.81 77.27 93.88 50.31 88.87 155.40 161.42 138.26 138.00 549.76 69.62 172.35 24 ER4a ExonRegion 0 47.65 62.23 201.47 71.05 62.48 143.11 50.80 119.59 125.77 123.64 120.10 32.62 45.58 99.60 141.39 80.44 82.51 115.72 164.77 101.78 396.53 83.76 174.06