Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SNX29 Gene 0 47.83 29.44 27.78 15.81 41.56 53.58 25.38 37.96 45.14 41.25 196.12 42.57 144.95 179.29 112.03 73.90 244.24 37.54 14.75 28.37 75.26 92.28 61.59 2 306030 Transcript 0 23.02 16.45 13.54 7.24 25.24 30.28 19.51 19.87 25.44 24.18 131.06 79.01 309.63 146.68 105.59 55.87 229.16 34.77 15.11 27.08 77.22 76.42 45.77 3 323433 Transcript 0 8.03 0.53 1.70 0.86 3.28 0.65 4.01 1.23 1.72 1.74 2.35 3.69 12.67 3.46 9.48 6.07 9.69 0.82 1.32 3.13 1.77 2.41 4.81 4 219090 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.01 0.00 0.11 0.96 4.47 0.02 0.06 0.00 0.05 0.00 1.72 0.00 0.03 0.07 0.00 5 ER1a ExonRegion 1 1.69 2.68 1.23 0.49 3.42 2.27 6.04 1.11 1.14 0.73 19.79 34.12 43.34 32.87 25.07 5.71 66.28 3.03 2.55 5.36 22.48 11.67 9.51 6 E2_Ab NovelBoundary 0 30.67 18.68 30.84 5.79 7.05 12.04 39.17 51.79 41.15 43.30 145.56 104.58 119.15 198.07 145.87 72.63 289.76 50.16 4.33 40.84 112.87 74.77 58.30 7 ER2a ExonRegion 0 10.12 12.33 11.41 2.21 7.86 9.11 21.89 11.88 16.52 14.52 97.01 85.24 112.71 133.23 110.34 45.23 225.29 21.25 6.67 20.48 78.09 43.88 38.27 8 ER2b ExonRegion 0 47.97 18.40 29.31 7.55 23.19 26.98 34.50 28.77 32.06 47.71 161.03 90.22 138.76 220.39 164.54 131.87 347.28 49.12 20.54 43.65 107.02 105.73 108.72 9 E2a_E3a KnownJunction 0 40.67 20.72 24.07 11.22 36.67 22.83 39.75 10.76 36.86 41.15 127.40 66.77 173.69 221.32 209.90 128.86 351.66 60.31 32.75 39.05 111.38 65.27 129.92 10 E3_Aa NovelBoundary 0 92.24 2.50 4.94 1.27 6.54 0.00 18.46 3.78 2.17 2.12 2.21 0.00 6.82 0.00 22.25 3.42 8.32 3.61 3.58 0.00 5.44 0.00 11.01 11 ER3a ExonRegion 0 21.53 16.64 23.23 5.59 20.35 14.48 28.22 18.24 30.72 38.77 118.26 55.09 107.25 178.55 144.03 91.20 341.43 48.92 15.09 31.13 90.87 61.57 93.32 12 E3a_E4a KnownJunction 0 27.56 8.95 18.60 7.46 11.80 13.97 29.32 27.85 31.13 40.59 77.39 18.31 68.99 158.40 111.01 86.99 230.67 45.60 8.28 40.84 79.38 34.96 93.13 13 ER4a ExonRegion 0 30.40 17.62 21.94 9.66 25.92 30.71 28.54 29.36 32.87 39.12 119.28 18.57 87.36 181.18 131.19 81.72 298.99 47.89 13.59 32.76 95.64 61.93 79.01 14 E4_Da NovelBoundary 0 21.71 2.89 2.84 0.00 0.00 2.50 10.86 2.09 6.97 1.24 0.00 12.15 20.45 7.71 4.45 14.78 26.27 12.39 0.00 0.00 3.03 0.00 4.27 15 E4a_E5a KnownJunction 0 34.08 22.96 21.82 9.82 33.87 33.16 35.64 20.62 45.40 42.71 138.46 31.51 93.66 260.11 139.32 100.32 369.33 63.22 23.81 48.96 91.37 58.42 82.03 16 I4 Intron 0 12.91 2.76 6.39 3.30 8.64 1.82 4.99 5.87 4.66 4.25 2.10 3.24 14.03 3.56 13.88 11.34 18.94 3.72 1.08 3.32 3.18 0.75 7.76 17 I4_AR1 ActiveIntronRegion 0 17.69 3.15 5.76 3.78 8.84 1.00 5.29 6.49 3.78 2.69 2.73 3.94 11.64 3.88 14.09 10.84 21.35 3.31 1.26 2.68 2.77 0.49 5.48 18 I4_SR1 SilentIntronRegion 0 11.03 2.61 6.68 3.12 8.60 2.16 4.90 5.65 5.03 4.90 1.85 2.98 15.06 3.44 13.85 11.60 18.04 3.90 1.01 3.59 3.37 0.86 8.72 19 I4_SR1 SilentIntronRegion 0 12.83 2.91 3.56 2.49 8.95 2.34 5.06 3.87 3.58 2.89 2.00 6.17 18.03 4.49 12.98 8.59 20.74 3.89 1.27 3.07 2.84 1.32 7.93 20 E5_Aa NovelBoundary 0 3.56 0.00 0.00 0.00 18.34 0.00 0.00 2.55 7.52 1.16 2.68 0.00 6.82 2.47 4.45 0.00 3.46 0.00 0.00 0.00 0.00 0.00 0.00 21 ER5a ExonRegion 0 26.82 13.73 21.56 7.13 29.18 36.96 22.78 30.55 44.06 39.34 106.22 41.33 135.35 242.98 129.42 95.57 302.55 69.46 13.19 40.16 86.43 66.15 92.05 22 E5a_E6a KnownJunction 0 44.75 29.60 18.04 5.69 39.90 42.53 15.02 41.07 43.14 41.47 104.87 57.02 126.29 227.21 180.73 115.78 253.02 67.94 18.54 30.87 74.19 94.36 123.78 23 ER6a ExonRegion 0 19.28 13.48 16.03 10.45 12.74 29.17 22.69 33.26 34.01 30.81 104.06 41.05 104.96 201.42 146.07 82.23 289.07 53.14 15.93 35.33 94.66 71.16 80.95 24 E6a_E7a KnownJunction 0 30.60 12.30 7.72 3.30 11.71 29.59 23.54 21.97 34.14 30.19 112.24 58.82 100.48 225.97 117.31 74.17 276.76 62.80 4.80 26.78 94.21 62.27 69.66 25 I6_SR1 SilentIntronRegion 1 17.21 5.19 4.91 6.54 9.51 2.32 9.47 7.78 7.28 3.80 3.52 11.48 45.22 4.79 21.10 7.59 26.91 3.33 1.20 3.54 2.89 2.18 9.52 26 I6_SR2 SilentIntronRegion 0 10.97 2.15 3.05 3.65 7.98 2.16 7.16 3.91 3.80 3.64 1.84 5.26 20.37 1.84 14.31 6.72 21.02 3.60 0.96 2.52 3.26 1.30 8.89 27 ER7a ExonRegion 0 28.28 13.03 13.20 9.00 20.57 27.44 29.37 32.07 33.29 36.71 155.98 75.69 145.00 228.02 90.08 88.56 353.43 60.98 13.55 41.27 111.33 83.24 91.74 28 E7a_E8a KnownJunction 1 19.63 9.47 16.68 17.25 15.87 37.42 23.01 42.55 57.35 38.39 191.63 82.08 173.69 309.44 89.87 87.33 358.95 52.89 25.88 59.25 124.42 94.67 101.07 29 I7_SR1 SilentIntronRegion 0 10.76 1.75 2.52 1.91 5.57 0.58 5.60 3.62 2.41 2.28 0.97 3.03 14.41 1.41 10.27 8.32 22.08 3.16 1.03 2.34 3.31 0.69 9.02 30 I7_AR1 ActiveIntronRegion 0 12.28 2.39 2.10 1.12 3.52 1.39 4.68 2.67 1.52 2.76 0.74 0.24 4.29 0.94 10.64 6.24 18.11 2.31 0.25 1.63 2.05 0.49 6.86 31 ER8a ExonRegion 0 31.61 14.16 16.09 11.03 25.29 43.09 23.78 32.13 49.81 42.79 158.66 72.23 176.37 252.07 104.72 94.14 403.12 66.89 17.58 42.35 126.67 92.42 81.10 32 E8a_E9a KnownJunction 0 21.26 17.89 15.46 6.63 12.99 40.66 17.27 24.36 28.50 43.65 123.03 64.52 166.71 201.96 105.69 114.67 342.40 50.24 4.24 17.51 103.85 109.00 70.94 33 I8_AR4 ActiveIntronRegion 0 10.58 0.00 1.23 2.73 0.54 0.00 0.00 1.73 4.45 1.95 0.00 4.33 9.38 0.00 10.44 2.97 10.23 0.00 0.00 0.21 0.00 0.00 5.87 34 I8_AR6 ActiveIntronRegion 0 13.17 2.03 0.27 2.73 5.35 1.22 3.82 1.73 5.63 3.06 0.00 13.47 0.00 1.62 2.90 2.97 13.20 0.00 0.00 0.00 2.20 0.00 5.87 35 ER9a ExonRegion 1 19.50 13.07 14.55 9.47 13.22 30.41 17.20 21.54 40.79 39.47 121.82 76.86 199.71 226.72 69.33 65.11 290.73 47.76 10.54 32.86 104.65 91.34 49.02 36 E9a_E10a KnownJunction 1 16.00 12.23 15.35 6.89 21.90 34.24 19.83 20.50 38.11 39.86 117.45 62.72 215.41 252.81 68.36 60.16 306.03 39.46 20.89 36.82 120.96 105.87 51.64 37 I9_AR1 ActiveIntronRegion 0 16.70 2.84 3.36 0.40 3.67 2.00 3.90 3.85 6.05 3.10 2.09 1.67 11.91 3.35 14.28 4.26 12.02 1.03 1.25 1.84 1.73 1.63 3.93 38 I9_SR2 SilentIntronRegion 0 14.13 4.20 0.00 0.62 6.04 1.06 5.04 2.17 1.51 0.00 1.50 4.47 22.39 0.00 3.74 2.59 12.56 0.00 0.00 0.00 2.70 0.00 1.52 39 I9_SR4 SilentIntronRegion 0 10.53 1.44 3.04 1.83 5.46 0.79 2.25 4.48 2.99 2.23 0.93 7.95 12.46 2.63 8.07 2.87 11.92 0.36 0.62 2.39 3.11 2.05 4.97 40 I9_AR5 ActiveIntronRegion 0 14.44 2.31 3.27 1.24 4.92 1.12 3.43 4.61 2.33 2.68 2.29 3.90 7.52 2.01 9.93 2.86 11.39 2.41 0.28 1.27 3.00 1.64 5.39 41 ER10a ExonRegion 1 24.68 12.02 12.19 10.76 12.71 39.75 17.19 25.53 39.66 40.65 147.59 73.37 237.01 270.53 90.09 99.88 326.38 42.73 17.52 33.17 119.94 123.86 73.73 42 E10a_E11a KnownJunction 1 28.30 22.17 7.98 11.42 32.43 38.73 40.10 23.04 40.65 44.83 178.20 78.63 221.25 316.85 91.23 92.28 369.71 36.11 26.35 24.80 124.23 187.62 108.41 43 ER11a ExonRegion 1 18.25 16.02 10.27 9.62 24.15 41.69 32.94 22.36 31.75 51.44 188.98 64.36 285.98 258.97 74.69 72.74 350.50 45.86 22.92 36.30 123.89 98.31 77.75 44 E11a_E12a KnownJunction 1 16.97 15.72 9.96 5.26 25.13 36.80 22.88 36.93 41.09 47.47 174.04 106.23 331.96 243.34 87.52 70.84 292.29 43.77 27.11 32.66 130.29 118.67 72.39 45 I11_AR1 ActiveIntronRegion 0 50.00 2.83 2.79 2.26 6.32 1.27 5.89 3.94 3.07 2.61 1.07 2.69 14.19 0.72 21.49 2.89 11.93 2.55 0.00 2.07 1.83 0.58 3.26 46 I11_SR2 SilentIntronRegion 0 17.44 1.60 1.77 1.49 4.62 0.86 6.20 3.50 3.42 1.74 1.01 3.32 9.05 1.30 7.90 2.95 8.20 1.85 0.17 1.78 1.79 0.16 4.45 47 I11_SR4 SilentIntronRegion 0 11.47 0.94 2.01 1.66 3.26 0.47 3.42 2.51 1.94 1.95 0.54 1.84 12.27 0.93 10.79 3.33 8.16 1.69 0.25 1.18 1.00 0.17 3.38 48 I11_AR4 ActiveIntronRegion 0 16.93 2.23 2.56 2.12 6.28 4.11 8.32 5.13 4.66 2.75 2.10 5.60 25.36 2.05 10.91 3.61 8.85 0.86 1.49 0.31 1.68 0.51 7.22 49 I11_AR5 ActiveIntronRegion 1 30.88 4.07 0.00 2.73 10.07 4.85 0.70 3.46 2.47 5.73 0.00 6.88 52.69 2.68 13.82 2.97 8.74 0.22 0.00 0.00 2.33 1.96 6.74 50 ER12a ExonRegion 1 34.30 11.60 14.24 15.73 8.24 28.05 18.67 34.02 51.76 54.06 201.09 118.58 472.83 312.25 126.42 91.63 385.27 63.69 24.40 39.32 118.11 157.46 93.43 51 E12a_E14a KnownJunction 1 26.75 3.16 9.40 19.48 8.66 21.12 4.06 41.61 44.07 64.82 255.80 61.67 340.56 288.07 122.63 70.58 483.22 51.94 8.47 57.21 148.27 81.32 88.61 52 I12_AR7 ActiveIntronRegion 0 12.42 2.52 2.49 5.04 3.98 0.91 5.95 2.55 6.37 4.80 0.24 2.60 19.67 2.01 12.14 2.95 7.48 1.03 0.40 1.06 0.27 0.41 4.41 53 ER13a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.34 2.89 13.40 0.05 0.18 0.00 0.16 0.00 5.16 0.00 0.10 0.20 0.00 54 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 ER14a ExonRegion 1 24.54 14.69 13.23 13.07 29.26 61.52 30.01 29.48 45.93 46.40 201.75 92.03 434.93 238.83 101.69 91.12 390.05 67.75 21.21 37.67 123.69 105.40 71.07 56 E14a_E15a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.61 2.16 0.00 0.00 4.77 4.45 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 57 E14a_E15b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 E14a_E16a KnownJunction 1 22.89 13.81 7.72 7.09 38.29 43.84 21.60 20.87 31.11 34.20 171.15 154.55 934.84 224.73 160.21 91.51 364.84 75.24 34.82 51.90 128.68 144.02 69.14 59 I14 Intron 0 11.64 3.58 3.21 1.82 8.21 1.17 5.70 2.41 4.75 3.07 3.40 3.96 16.79 4.62 11.79 7.78 20.63 1.31 2.15 4.38 3.46 1.79 8.90 60 I14_AR1 ActiveIntronRegion 0 15.36 2.39 4.87 1.52 7.99 1.17 6.22 2.47 5.50 3.65 2.68 3.77 14.45 3.10 12.05 6.03 17.60 0.98 4.08 4.31 3.53 2.00 8.15 61 ER15a ExonRegion 0 19.24 1.59 5.10 2.59 8.05 1.96 5.64 3.03 4.03 3.61 4.88 7.48 19.65 5.01 20.36 12.75 22.47 2.46 0.78 4.35 4.57 2.89 10.87 62 E15_Ab KnownBoundary 0 19.71 3.35 13.13 7.29 4.33 0.00 0.00 4.27 5.79 3.06 0.00 6.60 35.39 13.07 4.45 11.96 20.94 6.18 0.00 3.26 5.44 0.00 8.71 63 ER15b ExonRegion 1 11.67 4.49 5.71 2.38 14.65 0.93 9.25 3.73 4.81 2.18 1.01 5.24 31.75 7.91 14.54 11.54 21.63 1.53 1.27 2.84 6.05 3.31 6.36 64 E15_Da NovelBoundary 0 75.72 0.00 5.50 2.06 44.23 0.00 21.86 6.70 5.12 3.33 0.00 12.60 46.75 7.42 26.70 20.17 33.19 5.14 4.80 9.14 2.90 17.45 23.65 65 E15_Db NovelBoundary 1 29.56 0.00 4.38 0.00 7.64 2.78 15.90 6.00 6.60 1.67 0.00 31.51 99.18 14.60 33.75 16.58 27.96 2.45 8.47 3.00 5.93 6.25 12.98 66 ER15c ExonRegion 0 4.85 0.00 0.00 0.00 1.78 0.00 6.40 0.65 1.13 0.00 0.00 3.61 18.37 0.61 3.63 5.45 6.60 0.00 3.19 1.77 0.73 4.34 3.55 67 I15_AR1 ActiveIntronRegion 0 6.68 0.86 0.66 1.36 6.17 0.00 6.82 1.86 1.33 3.44 3.72 13.15 18.76 9.93 14.84 8.23 29.58 1.49 0.00 8.43 10.93 2.24 13.55 68 I15_AR5 ActiveIntronRegion 1 10.88 0.40 2.69 1.50 3.85 0.36 5.53 1.19 3.72 1.69 2.84 18.66 32.82 7.15 7.00 8.29 22.55 2.73 0.62 5.77 4.25 3.27 8.94 69 I15_AR10 ActiveIntronRegion 0 10.97 0.70 0.68 2.06 0.71 1.28 2.34 2.35 3.98 2.80 2.41 3.09 8.99 7.47 3.48 9.90 18.05 3.59 2.09 3.87 6.12 5.98 7.64 70 I15_SR8 SilentIntronRegion 0 13.08 0.00 0.20 0.22 1.16 1.08 4.06 1.86 2.84 2.39 3.30 2.94 14.94 8.01 5.44 4.17 16.80 2.98 1.03 3.60 7.19 3.59 2.38 71 I15_AR11 ActiveIntronRegion 0 29.05 0.98 0.00 0.00 2.57 0.00 9.60 2.98 2.21 0.00 3.50 15.56 25.84 9.09 10.48 4.29 13.48 0.00 0.00 8.13 0.23 4.03 10.78 72 I15_AR12 ActiveIntronRegion 0 21.64 0.77 0.46 1.80 1.69 0.23 3.85 3.25 5.12 3.24 4.88 10.77 30.04 9.50 7.45 7.88 23.36 4.06 1.21 8.06 8.36 7.65 8.53 73 I15_SR9 SilentIntronRegion 0 13.53 1.15 2.10 1.85 3.67 1.38 3.42 4.87 6.21 1.91 6.59 7.51 22.29 12.11 11.40 10.11 30.43 4.47 0.94 7.97 9.13 8.14 9.04 74 I15_AR14 ActiveIntronRegion 0 35.32 2.12 6.23 1.73 4.32 1.22 2.01 9.77 9.96 4.05 10.27 7.75 31.19 13.68 13.28 12.13 26.33 2.61 0.00 7.06 7.75 7.90 6.68 75 I15_SR10 SilentIntronRegion 0 38.06 1.66 4.98 1.66 2.19 2.00 2.17 5.62 10.50 1.39 9.98 7.85 30.95 12.32 8.94 11.30 33.19 4.51 1.74 7.54 13.16 5.11 6.41 76 E16_Aa NovelBoundary 0 54.82 5.92 8.69 4.66 7.56 2.44 3.36 4.76 11.26 2.74 9.11 6.30 46.59 35.43 33.38 22.30 27.12 5.43 0.00 16.11 21.00 7.72 23.05 77 ER16a ExonRegion 0 57.38 36.96 33.81 19.15 51.40 65.92 28.54 45.61 53.00 47.28 236.29 42.15 147.65 195.90 126.74 81.01 260.22 39.55 16.39 30.58 79.63 106.12 66.15