Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF200 Gene 0 20.48 15.46 14.41 9.80 22.24 10.02 14.09 10.67 6.98 17.62 16.31 11.00 6.36 17.25 14.90 15.34 12.80 11.89 9.82 13.44 6.82 8.60 6.88 2 414144 Transcript 0 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 396871 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 8311 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 396868 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 453093 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 431561 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 438090 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 396870 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 ER1a ExonRegion 0 0.51 0.00 0.00 0.00 0.00 0.00 0.00 0.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1_Ac KnownBoundary 0 3.19 0.00 0.00 0.00 0.00 0.00 0.00 2.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER1b ExonRegion 0 2.12 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1c ExonRegion 0 1.64 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.07 0.00 0.00 0.00 0.00 0.00 0.00 15 E1_Ad KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER1d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.50 0.00 0.81 0.00 0.00 0.04 0.00 0.00 0.39 0.60 0.87 0.95 0.81 0.00 0.33 0.00 0.00 0.00 17 E1_Ae KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.21 0.00 0.00 3.26 0.00 0.00 0.00 18 E1_Af KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 8.35 0.00 0.00 0.00 0.00 2.37 0.00 0.00 0.00 0.00 0.00 0.00 1.91 0.00 0.00 0.00 0.00 0.00 19 ER1e ExonRegion 0 0.58 0.00 0.00 0.00 0.00 6.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 1.62 0.30 0.00 0.00 2.13 0.00 0.00 0.00 20 ER1f ExonRegion 0 11.32 6.07 0.00 0.00 5.61 24.42 7.61 0.71 1.20 3.33 5.43 0.00 0.00 12.58 11.28 15.66 14.15 8.95 1.01 2.40 2.48 0.00 5.64 21 E1_Da KnownBoundary 0 34.45 25.72 0.00 0.00 29.63 19.82 22.39 2.34 2.78 8.84 7.26 0.00 0.00 32.14 4.45 53.49 14.31 20.15 4.80 0.00 3.15 0.00 16.90 22 E1a_E2a KnownJunction 0 3.04 0.00 0.00 0.00 3.99 0.00 2.25 0.00 1.68 1.29 0.00 0.00 0.00 4.59 4.45 0.00 4.77 4.68 0.00 0.00 0.00 0.00 4.35 23 ER1g ExonRegion 0 4.47 7.63 1.78 1.82 7.06 12.22 10.09 5.52 2.92 6.84 12.36 0.00 0.00 15.54 5.57 23.90 14.68 26.58 10.47 9.63 12.02 2.88 11.96 24 E1_Db KnownBoundary 0 0.00 6.31 1.83 5.93 0.00 0.00 1.94 2.18 1.79 8.41 5.00 0.00 0.00 0.00 0.00 4.10 8.04 16.33 4.61 9.40 8.53 0.00 3.84 25 E1b_E2a KnownJunction 0 0.00 3.22 3.52 1.83 3.99 2.78 2.25 10.43 3.59 5.32 21.64 0.00 0.00 19.84 0.00 16.41 0.00 4.48 7.81 5.94 3.15 2.76 0.00 26 ER1h ExonRegion 0 1.84 3.29 4.58 1.49 2.33 2.66 3.35 4.60 4.21 10.76 4.63 0.52 0.56 10.61 5.89 6.10 5.39 15.16 3.67 9.02 7.01 2.12 8.27 27 E1_Dc NovelBoundary 0 14.15 6.25 6.33 3.13 0.00 0.00 3.93 4.23 4.11 7.44 0.00 0.00 6.82 2.41 6.30 7.52 13.46 13.27 8.09 5.69 5.31 5.94 12.46 28 E1c_E2a KnownJunction 0 0.00 0.00 6.95 3.30 0.00 5.79 3.97 2.05 4.72 9.08 5.26 5.85 0.00 4.89 0.00 14.53 0.00 4.81 4.80 8.95 4.94 3.12 3.59 29 I1_AR2 ActiveIntronRegion 0 6.35 7.88 8.27 10.90 21.07 7.79 15.72 7.56 5.87 5.73 1.93 4.33 4.69 6.50 4.71 2.97 3.30 9.24 11.15 2.13 2.20 12.24 12.85 30 I1_SR2 SilentIntronRegion 0 6.35 7.12 6.13 11.58 21.41 9.17 19.42 10.37 8.03 7.26 3.87 8.66 4.69 6.50 6.29 2.97 3.30 10.16 9.56 2.13 2.20 14.24 17.13 31 I1_AR3 ActiveIntronRegion 0 4.86 7.15 8.62 6.46 8.94 4.22 10.50 5.08 6.79 5.25 1.26 7.31 6.47 3.89 5.71 6.91 1.55 9.62 3.81 5.77 1.29 9.20 9.01 32 E2_Aa NovelBoundary 0 3.78 9.14 9.58 2.63 0.00 2.90 2.25 7.39 1.27 2.12 10.06 0.00 0.00 0.00 0.00 4.02 4.77 5.89 4.24 0.00 5.81 0.00 3.24 33 ER2a ExonRegion 0 20.08 19.61 19.77 15.43 25.41 21.22 18.44 21.05 15.08 30.63 43.38 16.11 12.60 46.67 24.72 43.09 41.47 48.04 23.33 33.28 24.34 14.63 22.91 34 E2a_E3a KnownJunction 0 20.52 26.97 27.94 22.67 20.46 38.27 28.93 23.54 12.44 22.75 47.91 92.43 19.80 80.76 50.44 35.72 34.13 63.84 45.08 42.63 28.05 15.12 7.94 35 ER3a ExonRegion 0 29.35 19.86 24.73 21.16 41.07 28.35 24.47 12.66 17.33 31.87 44.93 31.91 17.13 60.62 29.63 48.19 44.14 47.11 26.45 35.26 26.87 22.08 14.35 36 E3a_E4a KnownJunction 0 39.56 31.05 21.35 21.28 26.83 13.23 40.59 9.57 19.70 30.70 55.44 18.46 13.15 48.74 42.77 41.70 64.05 67.44 43.58 29.34 22.86 25.66 19.12 37 E3a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER4a ExonRegion 0 33.86 24.40 23.28 16.35 24.08 14.67 29.79 9.51 17.29 25.23 57.99 36.80 9.38 50.75 41.34 36.41 48.69 57.28 32.65 34.04 13.22 21.88 20.56 39 ER4b ExonRegion 0 20.05 24.07 27.93 22.90 39.20 21.38 25.56 18.94 18.60 40.92 45.15 41.92 26.81 62.03 36.84 50.57 46.24 40.97 34.99 37.26 15.41 19.33 13.13 40 E4_Da NovelBoundary 0 0.00 6.05 0.00 12.69 0.00 2.27 2.25 0.00 0.00 1.24 4.95 6.30 0.00 10.24 4.94 16.75 0.00 12.97 8.85 15.28 5.81 3.12 4.35 41 E4a_E5a KnownJunction 0 17.19 15.52 16.38 12.79 57.89 4.54 20.23 8.75 9.11 32.42 29.43 6.30 0.00 12.18 4.45 8.46 18.89 8.29 20.61 20.52 10.26 14.45 0.00 42 E4a_E5b KnownJunction 0 6.74 9.87 9.93 9.16 24.36 7.55 8.30 6.04 4.57 14.83 20.48 18.61 12.82 19.54 0.00 7.60 17.30 8.21 0.00 5.82 3.15 3.12 3.33 43 E5_Aa NovelBoundary 0 9.56 2.43 1.09 9.19 6.28 0.00 2.08 0.00 0.00 2.82 9.53 11.40 6.82 7.12 6.30 4.02 7.57 1.87 9.41 5.69 0.00 0.00 0.00 44 ER5a ExonRegion 0 13.76 12.71 11.03 13.29 42.14 7.34 14.89 8.64 11.73 29.82 25.61 22.73 11.73 12.99 10.88 17.83 23.93 11.09 12.74 18.62 9.37 11.98 3.67 45 ER5b ExonRegion 0 9.53 5.16 3.51 3.59 6.32 5.40 6.01 2.42 2.27 7.08 4.55 4.24 2.49 5.64 3.36 6.06 3.56 2.29 4.30 3.47 0.73 3.30 2.02 46 E5_Da KnownBoundary 0 35.71 21.90 1.71 0.00 8.57 2.44 0.00 4.15 3.39 0.00 4.95 0.00 6.33 0.00 0.00 0.00 0.00 1.70 0.00 0.00 0.00 3.06 0.00 47 ER5c ExonRegion 0 35.00 25.17 23.26 14.64 37.27 10.57 21.14 15.63 8.45 23.47 18.54 15.16 7.91 15.42 21.36 13.27 10.26 4.59 10.11 14.99 5.10 12.10 5.44 48 ER5d ExonRegion 0 6.26 6.10 6.81 0.00 4.92 2.64 3.60 2.77 1.09 3.21 0.00 2.60 0.00 0.84 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00