Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	MMP25	Gene	0	13.10	0.56	2.86	2.45	6.35	5.50	4.63	9.62	5.01	6.22	1.37	0.62	1.97	3.08	2.04	3.22	2.11	1.03	0.80	1.30	1.93	1.24	2.81
2	325800	Transcript	0	0.00	0.00	0.41	0.00	0.01	1.44	0.00	1.09	0.78	0.00	1.23	0.74	0.00	1.62	0.44	0.00	0.00	0.00	0.00	0.45	0.00	0.00	0.00
3	336577	Transcript	0	11.77	0.60	2.67	3.88	4.14	5.44	6.23	14.84	5.50	6.60	1.36	1.00	1.66	4.00	2.46	4.46	2.30	1.49	0.55	1.69	1.72	1.80	3.43
4	ER1a	ExonRegion	0	0.41	0.00	0.83	0.00	1.74	2.51	0.40	0.98	0.23	0.43	0.59	0.00	0.00	0.45	0.00	0.00	0.00	0.42	0.00	0.00	0.67	0.00	0.45
5	E1a_E2a	KnownJunction	0	3.33	0.00	0.00	0.00	3.90	0.00	0.00	2.55	2.89	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER2a	ExonRegion	0	2.20	0.00	2.10	0.00	1.75	1.74	1.55	4.69	0.99	3.31	1.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.19	0.00	0.85	0.00	1.13
7	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	8.57	4.46	3.61	1.30	1.40	2.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	Ix	Intron	0	10.63	0.85	6.12	1.36	3.14	0.77	4.99	1.94	3.85	0.43	0.65	0.00	0.32	1.02	2.57	1.99	0.55	1.61	0.00	2.32	0.74	0.52	2.21
9	Ix_SR1	SilentIntronRegion	0	10.67	0.85	6.14	1.37	3.15	0.77	5.01	1.95	3.87	0.43	0.65	0.00	0.32	1.03	2.58	2.00	0.55	1.62	0.00	2.32	0.74	0.53	2.22
10	ER3a	ExonRegion	0	4.93	0.00	3.96	1.51	2.01	1.74	2.14	4.77	1.63	1.71	1.07	0.00	0.00	2.11	1.09	1.11	0.00	0.00	2.39	0.80	0.92	0.00	1.10
11	E3a_E4a	KnownJunction	0	3.56	0.00	6.21	0.00	0.00	0.00	4.15	4.56	9.00	1.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER4a	ExonRegion	0	14.08	0.36	8.91	5.05	8.34	4.87	8.27	6.83	7.46	7.46	0.68	0.55	2.60	1.84	0.51	1.58	1.15	0.00	3.27	4.12	4.19	2.55	2.56
13	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E4_Db	NovelBoundary	0	13.56	3.35	0.00	4.96	12.14	0.00	0.00	0.00	5.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.35
15	E4b_E6a	KnownJunction	0	3.78	0.00	1.39	5.53	3.14	0.00	0.00	9.04	4.48	7.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER4b	ExonRegion	0	4.23	0.00	1.23	5.45	2.68	0.00	9.27	10.37	6.18	9.18	0.00	0.00	0.00	0.00	0.00	2.97	0.00	0.00	0.00	6.38	0.00	0.00	0.00
17	Ix	Intron	0	39.51	1.50	5.06	3.75	8.41	2.37	4.89	1.90	2.72	1.89	0.71	2.64	2.04	1.84	0.91	5.49	0.61	0.34	1.77	2.75	2.04	0.77	2.17
18	Ix_SR1	SilentIntronRegion	0	39.65	1.51	5.08	3.77	8.44	2.38	4.91	1.91	2.73	1.90	0.72	2.64	2.05	1.84	0.92	5.51	0.61	0.34	1.77	2.75	2.04	0.77	2.18
19	Ix	Intron	0	66.72	4.75	18.80	15.20	21.02	5.45	11.52	11.35	19.53	3.63	7.59	16.99	22.48	20.79	11.73	36.59	9.63	9.70	3.04	9.48	8.65	11.72	14.65
20	Ix_AR1	ActiveIntronRegion	0	39.34	5.77	19.02	15.84	18.23	4.12	8.86	11.78	15.56	2.23	6.72	9.92	15.48	16.40	7.33	28.89	5.36	8.41	1.50	6.61	5.05	7.37	11.45
21	Ix_SR2	SilentIntronRegion	0	74.33	1.77	20.51	13.94	15.88	5.91	11.09	14.02	18.68	4.67	5.46	29.26	27.91	27.21	19.87	44.25	14.04	10.73	2.07	10.56	11.10	11.31	16.12
22	Ix_AR2	ActiveIntronRegion	0	91.28	5.16	17.80	15.18	26.44	6.61	14.49	9.63	24.08	4.56	9.55	18.33	27.07	22.22	12.30	40.87	11.90	10.54	5.10	11.93	11.18	16.41	17.25
23	Ix	Intron	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.75	12.13	7.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	Ix_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.60	12.37	7.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	Ix_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.36	12.36	7.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	Ix	Intron	0	25.48	9.59	11.73	9.75	10.23	1.49	9.05	5.66	7.64	2.36	0.79	0.93	5.34	4.40	3.78	6.29	6.72	7.25	2.59	7.44	6.81	2.88	2.39
27	Ix_AR1	ActiveIntronRegion	0	34.05	3.32	7.75	7.32	4.92	1.02	5.04	4.17	5.75	3.15	1.13	0.00	10.09	3.76	4.70	5.40	5.92	9.76	0.00	8.16	8.07	1.56	3.13
28	Ix_SR2	SilentIntronRegion	0	28.40	12.04	14.22	12.70	14.23	2.02	12.22	7.06	9.12	2.95	0.78	0.98	5.84	5.14	4.49	8.88	8.36	8.27	3.50	9.24	8.39	4.20	2.05
29	Ix_AR2	ActiveIntronRegion	0	15.87	9.15	9.87	4.70	5.02	0.69	4.96	3.99	6.24	0.73	0.72	1.62	1.45	3.73	1.54	1.11	3.71	4.13	2.39	3.19	2.48	0.78	3.30
30	E5_Aa	NovelBoundary	0	100.02	0.00	21.32	22.14	11.97	2.90	12.67	15.94	43.89	6.53	17.11	12.60	6.01	18.66	13.35	53.40	9.54	24.95	3.86	8.82	18.84	16.41	54.12
31	ER5a	ExonRegion	0	0.00	0.00	0.82	0.00	0.02	2.89	0.00	2.19	1.56	0.00	2.46	1.48	0.00	3.23	0.87	0.00	0.00	0.00	0.00	0.90	0.00	0.00	0.00
32	E5_Da	NovelBoundary	0	25.93	0.00	4.91	2.93	3.99	0.00	7.73	1.93	4.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	3.58	0.00	0.00	3.12	0.00
33	Ix	Intron	0	39.73	3.35	5.73	6.38	6.00	6.45	4.55	10.02	6.19	4.47	4.91	3.43	5.03	7.20	6.96	16.89	6.66	5.43	2.62	6.36	5.27	5.61	7.47
34	Ix_AR1	ActiveIntronRegion	0	43.16	1.81	1.72	3.11	2.70	3.37	1.85	2.20	3.28	0.46	2.21	0.82	6.08	3.82	4.63	11.31	4.03	3.80	0.73	1.50	4.51	2.06	7.78
35	Ix_SR1	SilentIntronRegion	0	40.05	5.24	6.43	6.15	8.70	7.74	5.00	8.81	6.60	5.68	5.22	5.31	7.67	7.87	8.07	19.70	6.68	5.95	2.79	6.00	7.13	8.53	8.40
36	Ix_AR2	ActiveIntronRegion	0	90.55	4.60	11.03	13.33	10.94	9.57	4.89	25.63	10.20	10.67	5.55	3.95	0.00	12.78	7.57	29.98	8.04	6.99	5.96	6.11	5.65	4.53	11.36
37	Ix_AR3	ActiveIntronRegion	0	87.35	4.07	16.15	14.99	12.16	5.33	3.97	32.21	12.01	12.09	5.80	4.33	0.00	7.83	7.91	25.40	11.40	5.88	3.19	16.63	2.20	0.19	9.88
38	Ix_AR4	ActiveIntronRegion	0	27.16	2.80	8.18	8.93	5.79	8.20	7.09	16.81	8.17	6.42	7.47	4.16	1.95	9.59	8.24	18.10	9.15	6.50	4.12	11.54	4.29	6.84	5.58
39	E6_Aa	NovelBoundary	0	24.67	2.43	8.34	8.76	8.23	7.89	10.73	14.66	13.19	3.22	2.68	0.00	0.00	16.66	9.15	12.13	3.55	13.10	0.00	15.72	10.44	17.94	0.00
40	ER6a	ExonRegion	0	23.39	1.76	8.90	11.66	8.68	6.29	7.55	18.80	17.38	9.15	3.35	4.11	4.45	12.78	10.79	17.08	5.73	7.68	3.67	6.03	5.08	8.28	10.85
41	E6_Da	NovelBoundary	0	56.60	3.35	3.40	1.96	15.62	15.73	0.00	6.37	12.36	6.12	5.37	0.00	6.49	19.48	4.45	15.81	0.00	7.92	3.76	6.14	7.97	8.08	15.45
42	E6a_E7a	KnownJunction	0	16.97	0.00	4.14	2.60	0.00	13.40	16.12	32.78	3.12	11.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.06	3.76
43	Ix	Intron	0	36.70	1.04	3.73	6.21	6.82	2.81	6.75	0.00	8.45	1.74	1.97	3.64	3.94	8.14	6.70	10.61	5.05	6.56	3.25	0.00	4.50	7.44	16.47
44	Ix_AR1	ActiveIntronRegion	0	37.45	1.04	3.80	6.33	6.96	2.86	6.89	0.00	8.62	1.77	2.01	3.71	4.02	8.30	6.84	10.83	5.15	6.69	3.32	0.00	4.59	7.57	16.78
45	E7_Aa	NovelBoundary	0	57.57	6.64	12.65	14.42	29.12	5.79	8.08	6.08	7.81	4.67	5.11	0.00	6.66	9.54	0.00	11.28	4.77	10.49	0.00	9.52	9.02	5.63	28.85
46	ER7a	ExonRegion	0	33.32	0.00	3.66	5.24	9.41	9.75	13.47	21.80	7.93	8.00	3.43	3.87	4.14	11.20	1.91	6.33	1.94	1.70	1.91	2.55	1.45	3.16	10.88
47	E7_Da	NovelBoundary	0	26.97	0.00	8.75	2.06	3.99	2.44	24.55	5.67	12.62	1.67	4.84	6.30	0.00	9.89	8.90	15.47	9.07	6.92	3.95	0.00	0.00	17.15	11.44
48	E7a_E8a	KnownJunction	0	3.19	0.00	0.00	2.06	4.07	8.06	10.07	15.12	1.71	1.10	0.00	0.00	0.00	0.00	0.00	4.36	0.00	0.00	0.00	0.00	0.00	2.94	0.00
49	Ix	Intron	0	16.93	2.03	2.74	2.03	9.37	6.42	1.32	2.58	1.84	1.71	3.87	4.84	11.59	6.83	4.10	14.86	4.95	7.81	1.59	3.19	4.41	3.13	20.59
50	Ix_AR1	ActiveIntronRegion	0	17.08	2.05	2.77	2.05	9.46	6.48	1.34	2.60	1.86	1.73	3.90	4.89	11.70	6.90	4.14	14.98	5.00	7.88	1.61	3.22	4.45	3.16	20.79
51	E8_Aa	NovelBoundary	0	27.04	0.00	12.60	14.52	40.41	2.90	18.28	12.20	16.23	1.45	2.58	16.96	7.63	18.36	0.00	32.56	3.93	20.35	9.60	15.15	8.71	8.70	20.57
52	ER8a	ExonRegion	0	25.68	2.50	5.43	3.43	8.22	15.47	9.49	19.26	5.64	7.45	3.59	4.17	4.92	9.22	2.52	11.96	12.29	2.83	0.00	2.61	5.28	2.16	6.30
53	E8_Da	NovelBoundary	0	61.12	5.85	12.36	14.78	31.07	8.29	23.72	20.82	11.23	2.79	14.85	12.30	13.31	21.72	8.90	39.14	0.00	7.13	0.00	5.82	8.83	17.64	15.79
54	E8a_E9a	KnownJunction	0	6.59	0.00	0.00	1.70	4.07	2.56	1.99	12.40	4.25	8.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.35
55	Ix	Intron	0	41.63	0.49	3.99	7.40	12.35	1.78	5.14	3.13	4.92	0.42	3.29	3.46	6.57	11.74	10.15	18.77	4.81	6.47	5.42	5.68	4.27	5.06	13.55
56	Ix_AR1	ActiveIntronRegion	0	42.03	0.50	4.03	7.47	12.47	1.80	5.19	3.15	4.96	0.42	3.32	3.50	6.63	11.85	10.25	18.95	4.86	6.53	5.47	5.74	4.31	5.11	13.68
57	E9_Aa	NovelBoundary	0	23.93	0.00	17.95	4.56	15.96	2.90	9.76	5.83	19.65	4.32	2.47	0.00	0.00	2.47	0.00	38.88	18.33	3.56	0.00	0.00	5.19	3.12	18.27
58	ER9a	ExonRegion	0	12.30	2.71	2.89	5.24	2.68	5.20	3.46	11.73	5.10	3.71	1.93	0.00	3.86	7.49	8.80	6.84	1.04	2.72	0.00	1.42	2.20	0.69	5.39
59	E9_Da	NovelBoundary	0	10.96	0.00	3.22	3.20	8.66	0.00	3.75	0.00	5.06	0.00	0.00	0.00	0.00	7.12	9.64	12.05	12.53	2.40	3.86	2.88	8.65	8.51	7.51
60	E9a_E10a	KnownJunction	0	0.00	0.00	1.71	2.00	0.00	0.00	2.25	16.31	3.24	6.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
61	ER10a	ExonRegion	0	7.89	0.40	3.74	0.89	2.64	3.62	2.21	8.09	6.15	1.87	4.59	0.70	2.29	10.12	7.12	6.42	7.16	4.18	1.26	2.50	7.41	2.47	0.58
62	E10_Da	NovelBoundary	0	9.78	0.00	1.18	8.42	7.56	5.05	6.49	8.05	6.86	1.67	2.63	0.00	0.00	4.71	8.90	15.98	9.54	10.65	0.00	0.00	16.25	4.78	4.35
63	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	2.83	0.00	0.00	0.00	6.33	1.59	2.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
64	E11_Aa	NovelBoundary	0	14.00	0.00	1.83	2.06	0.00	0.00	0.00	1.73	1.22	0.00	0.00	0.00	0.00	5.24	0.00	4.36	4.02	2.57	0.00	0.00	5.56	3.12	4.10
65	ER11a	ExonRegion	0	15.74	0.49	1.57	1.84	8.26	6.40	5.05	10.95	4.74	8.35	0.73	0.19	1.98	1.17	0.85	2.08	1.68	0.22	0.26	0.52	0.89	0.62	2.52