Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BLM Gene 0 53.23 114.78 60.24 51.85 69.24 34.68 100.91 60.16 19.56 89.14 141.71 156.35 78.46 112.01 49.61 106.12 105.41 114.68 36.38 87.74 1.23 7.46 2.24 2 355112 Transcript 0 60.79 126.38 66.58 56.33 74.92 35.85 102.63 61.64 18.82 92.06 129.70 138.32 76.07 118.71 56.77 103.71 101.47 112.40 37.50 89.60 1.44 7.51 2.38 3 IG3_AR4 ActiveIntergenicRegion 0 4.71 10.70 10.82 11.11 9.00 12.92 15.76 10.20 7.26 7.99 5.50 3.83 3.48 2.92 6.91 5.19 2.88 7.34 14.62 10.36 0.83 0.37 0.00 4 ER1a ExonRegion 0 13.83 35.02 6.68 2.07 25.35 27.76 44.93 6.67 1.38 17.70 27.70 0.91 6.54 23.34 9.57 37.99 34.92 11.43 7.49 31.06 1.97 1.22 1.31 5 E1a_E2a KnownJunction 0 13.26 46.18 8.07 6.19 25.21 25.61 36.39 21.11 7.26 42.01 24.32 17.86 27.60 26.08 4.45 76.82 38.15 77.64 8.09 42.89 0.00 5.63 0.00 6 ER2a ExonRegion 0 5.54 20.97 10.90 6.36 12.54 23.80 27.83 25.08 11.93 40.49 95.60 48.64 34.81 39.47 7.37 77.48 64.59 61.66 21.33 47.64 1.62 6.97 0.00 7 E2a_E3a KnownJunction 1 3.26 3.03 22.03 13.38 10.19 15.10 42.97 32.41 18.08 64.15 147.41 59.87 32.63 98.01 8.90 38.37 134.55 78.80 21.84 99.97 5.50 0.00 0.00 8 ER3a ExonRegion 1 10.29 46.83 18.77 20.34 42.42 27.93 79.47 38.08 18.56 70.58 155.88 211.53 87.56 112.94 21.07 117.05 123.84 120.15 33.32 89.29 0.89 6.93 0.85 9 E3a_E4a KnownJunction 0 15.78 14.67 37.91 12.12 65.79 17.43 95.08 29.20 14.96 66.54 139.88 163.25 86.36 124.67 41.04 114.16 85.93 91.94 28.33 81.94 0.00 2.88 0.00 10 ER4a ExonRegion 0 8.27 31.38 28.18 19.45 38.68 21.08 77.37 30.57 14.05 78.37 165.11 239.28 118.16 117.06 32.69 94.61 106.04 107.57 28.57 97.13 0.70 6.55 1.27 11 E4a_E5a KnownJunction 1 6.22 22.50 32.46 26.30 64.18 47.42 91.86 23.70 18.03 74.86 151.25 148.25 101.62 128.14 60.45 65.03 149.42 73.54 23.15 96.13 0.00 5.76 4.18 12 ER5a ExonRegion 0 11.79 42.58 24.66 26.28 59.39 26.38 69.30 33.97 11.47 63.71 171.47 199.39 95.38 131.03 33.66 94.92 141.45 103.16 23.99 97.26 0.88 5.49 2.80 13 E5_Da NovelBoundary 0 15.41 30.46 14.16 17.58 18.93 0.00 27.82 11.75 4.69 14.29 19.74 25.21 5.84 4.59 8.90 12.82 18.89 38.14 8.38 75.68 0.00 0.00 0.00 14 E5a_E6a KnownJunction 0 3.48 24.14 10.76 11.19 19.95 10.85 42.62 15.32 6.28 65.09 120.19 106.08 28.89 102.60 25.34 83.40 169.42 57.12 30.12 82.64 0.00 2.69 7.85 15 I5 Intron 0 3.48 6.69 7.51 5.57 7.34 4.53 30.49 16.95 1.01 7.97 18.55 17.53 13.84 7.70 7.96 10.59 17.20 17.16 6.99 28.59 0.00 0.00 0.00 16 I5_SR1 SilentIntronRegion 0 3.52 6.76 7.59 5.63 7.42 4.57 30.81 17.12 1.02 8.05 18.75 17.72 13.99 7.79 8.04 10.71 17.38 17.34 7.06 28.90 0.00 0.00 0.00 17 I5 Intron 0 10.79 22.94 12.57 11.86 19.81 3.04 31.54 9.76 3.77 9.38 8.08 19.97 13.18 6.99 8.18 9.97 11.79 24.56 7.91 24.46 0.29 1.09 0.26 18 I5_AR1 ActiveIntronRegion 0 16.40 34.66 19.00 17.39 30.39 3.79 42.99 15.21 4.76 13.12 9.70 21.33 15.17 9.42 10.75 14.70 15.84 36.10 9.64 33.45 0.00 1.84 0.43 19 E6_Aa NovelBoundary 0 43.64 70.25 30.07 17.71 41.00 7.10 66.29 37.01 1.22 24.74 15.27 12.60 14.61 12.13 32.63 25.04 17.20 50.99 13.46 43.59 0.00 0.00 0.00 20 ER6a ExonRegion 0 12.30 39.49 25.38 24.43 40.30 29.45 78.17 39.78 8.79 67.54 163.44 162.31 93.45 136.62 30.34 110.35 125.63 80.77 33.91 79.89 2.22 5.86 3.67 21 E6_Da NovelBoundary 0 40.75 44.07 52.95 27.20 27.59 2.90 31.31 21.97 3.18 31.11 14.90 13.05 25.81 2.47 9.64 11.62 9.54 36.60 8.38 49.02 0.00 3.12 0.00 22 E6a_E7a KnownJunction 1 17.86 33.88 11.15 14.32 24.96 15.28 60.77 28.26 4.80 60.55 115.34 105.33 33.76 135.62 13.35 99.72 115.19 78.22 30.59 53.43 3.09 3.12 0.00 23 I6 Intron 0 44.69 44.92 19.28 15.83 33.46 6.25 43.44 13.81 3.89 14.99 19.78 23.16 24.60 7.40 5.49 14.48 19.84 20.63 10.86 36.98 0.00 0.34 0.00 24 I6_SR1 SilentIntronRegion 0 79.14 57.36 15.78 15.53 66.15 13.38 61.22 12.13 3.51 14.29 23.59 23.73 42.96 9.77 6.71 17.25 21.07 17.57 9.39 37.29 0.00 0.00 0.00 25 I6_AR1 ActiveIntronRegion 0 26.26 50.93 30.75 25.40 18.49 2.92 26.06 13.91 7.13 19.08 23.63 5.31 22.17 6.20 3.82 10.94 29.56 32.92 14.91 49.42 0.00 1.61 0.00 26 I6_AR2 ActiveIntronRegion 0 25.40 52.87 31.45 22.49 18.73 1.83 27.80 11.23 7.41 17.59 22.55 12.99 17.98 3.25 5.80 11.89 10.45 28.64 12.74 40.07 0.00 2.08 0.00 27 I6_AR3 ActiveIntronRegion 0 25.81 36.11 19.74 14.66 14.94 2.28 35.23 15.17 3.60 14.97 16.87 25.85 13.44 6.28 4.97 13.41 18.45 20.91 11.35 35.44 0.00 0.32 0.00 28 E7_Aa NovelBoundary 1 17.26 52.49 19.57 28.17 42.87 5.11 62.76 19.02 8.54 15.20 4.95 32.56 40.91 2.47 4.45 4.10 16.92 34.07 17.32 36.62 0.00 2.63 4.18 29 ER7a ExonRegion 0 38.98 93.47 40.76 44.89 51.19 36.51 119.09 52.87 20.18 88.51 177.68 172.66 99.03 119.10 29.85 118.95 131.32 115.35 37.11 91.45 0.91 8.13 2.83 30 E7a_E8a KnownJunction 0 68.46 153.26 58.22 49.71 51.02 81.26 166.10 70.69 21.50 88.94 152.62 203.32 132.46 135.44 38.32 140.65 132.87 123.82 46.50 100.80 0.00 5.94 4.35 31 ER8a ExonRegion 0 39.53 102.96 53.28 53.33 75.72 44.21 142.29 64.85 22.10 86.95 146.52 202.88 108.11 138.81 43.10 140.48 126.10 129.90 30.44 105.75 0.00 8.94 5.17 32 E8a_E9a KnownJunction 0 39.34 127.21 58.34 78.81 65.28 29.02 104.67 66.91 29.69 101.81 94.87 151.10 53.57 218.61 59.21 118.09 66.11 98.00 43.39 127.07 0.00 12.25 7.60 33 ER9a ExonRegion 0 34.74 101.70 44.24 55.75 48.64 26.40 85.80 46.60 27.49 81.65 141.10 117.19 66.37 130.65 34.82 111.44 96.36 128.85 29.28 83.77 0.00 7.13 4.96 34 E9a_E10a KnownJunction 0 57.42 127.67 29.83 77.95 74.19 54.51 81.97 48.43 26.22 94.90 121.35 67.82 75.97 125.61 25.71 150.22 71.62 145.42 21.84 81.94 0.00 8.08 0.00 35 ER10a ExonRegion 0 39.19 136.93 56.35 69.66 99.59 44.96 146.61 60.68 25.36 100.93 169.03 143.67 105.90 163.05 47.01 172.49 104.15 157.30 44.01 106.01 1.82 9.96 5.15 36 E10a_E11a KnownJunction 0 19.26 132.94 39.56 57.57 105.18 53.44 181.07 33.11 20.95 89.40 147.30 139.70 113.79 119.84 27.32 136.03 111.36 146.33 50.92 97.86 2.41 12.37 0.00 37 ER11a ExonRegion 0 24.74 128.85 48.58 61.41 76.16 40.75 126.69 53.76 21.75 98.30 148.79 145.02 100.05 114.43 34.29 119.82 85.52 148.45 45.53 96.45 1.65 8.82 0.00 38 E11a_E12a KnownJunction 1 24.45 149.97 55.11 53.91 60.19 15.45 84.66 58.04 10.04 110.59 140.09 128.44 199.18 113.25 52.17 102.28 121.46 145.13 62.31 86.67 2.84 2.51 0.00 39 ER12a ExonRegion 0 37.61 127.13 60.54 60.15 68.80 27.21 75.27 66.74 18.62 108.39 144.93 182.68 97.61 127.71 48.45 140.41 115.22 181.90 50.28 97.44 2.47 6.59 2.13 40 E12a_E13a KnownJunction 0 51.56 150.63 45.36 38.29 107.30 28.68 144.24 46.21 13.60 95.20 108.40 105.18 47.72 131.44 68.48 68.87 75.74 115.28 33.70 84.69 5.56 3.12 0.00 41 E12a_E14a NovelJunction 0 0.00 6.12 0.00 2.56 0.00 0.00 10.33 0.00 0.00 2.98 0.00 0.00 0.00 5.71 0.00 0.00 0.00 16.79 4.80 7.80 0.00 0.00 0.00 42 E13_Aa NovelBoundary 0 36.38 26.84 12.06 5.03 4.33 5.45 6.67 9.82 1.74 7.74 4.95 6.30 0.00 7.95 0.00 16.32 7.76 0.00 0.00 26.97 0.00 2.88 0.00 43 ER13a ExonRegion 0 62.70 153.72 85.18 60.02 104.30 37.77 151.69 71.74 24.96 98.28 148.74 159.14 92.53 163.11 67.89 157.41 118.28 169.04 67.19 122.49 3.27 4.61 5.00 44 E13a_E14a KnownJunction 0 65.72 147.87 74.95 53.94 51.87 36.97 120.92 72.41 15.80 110.11 132.98 151.40 87.82 202.84 76.77 172.35 127.26 137.46 44.42 132.37 2.90 8.70 7.17 45 ER14a ExonRegion 0 37.74 116.79 53.34 43.20 67.72 24.63 91.47 57.62 22.12 82.50 103.85 105.44 65.31 139.17 59.92 116.23 97.35 179.00 30.07 104.90 3.45 4.66 4.30 46 E14a_E15a KnownJunction 0 43.86 132.94 51.92 56.37 74.62 12.38 71.54 62.10 20.66 88.16 137.56 67.52 40.09 158.75 72.93 123.73 117.44 155.78 47.06 92.68 5.00 5.94 4.01 47 E15_Aa NovelBoundary 0 3.11 15.66 2.99 3.96 7.72 2.61 8.04 20.21 2.92 9.00 2.05 0.00 0.00 0.00 0.00 12.99 3.55 6.92 8.19 8.05 0.00 0.00 0.00 48 ER15a ExonRegion 0 75.58 138.92 57.59 42.32 78.39 36.10 98.52 56.77 19.66 87.55 125.99 74.29 39.53 138.21 65.52 99.08 102.68 158.91 40.19 89.93 0.79 7.78 2.82 49 E15a_E16a KnownJunction 0 145.29 177.67 78.65 53.24 143.89 77.34 159.12 74.26 13.02 92.30 107.82 87.33 44.48 130.08 42.28 80.49 54.60 94.43 35.11 131.35 0.00 10.96 0.00 50 ER16a ExonRegion 0 113.84 160.68 80.01 79.53 92.25 49.75 139.41 86.23 25.86 132.42 116.74 135.71 72.88 105.06 59.85 68.55 63.98 80.34 32.82 92.19 0.59 9.35 0.35 51 E16a_E17a KnownJunction 1 90.46 164.44 115.11 109.24 90.92 44.12 144.81 97.10 29.28 144.73 110.50 256.13 128.08 128.26 103.71 104.16 82.56 72.46 21.65 120.74 0.00 13.90 4.35 52 ER17a ExonRegion 0 78.58 151.56 109.46 98.84 122.29 62.67 142.71 96.88 27.84 124.30 158.95 229.81 100.93 90.71 65.47 75.11 85.80 79.73 41.41 93.42 1.47 10.87 1.57 53 E17a_E18a KnownJunction 0 109.43 184.97 126.28 100.52 105.69 41.06 113.81 113.49 30.50 133.34 161.15 142.70 73.21 99.24 58.84 65.20 73.87 82.66 47.44 61.42 0.00 17.88 0.00 54 ER18a ExonRegion 0 132.28 194.81 132.48 90.60 108.27 41.88 136.94 94.85 28.12 134.61 190.34 242.13 99.92 108.45 65.26 85.57 111.85 97.20 44.99 90.07 0.58 9.63 2.25 55 E18a_E19a KnownJunction 1 131.88 211.94 122.85 92.90 158.66 71.72 130.24 103.34 21.56 123.51 134.67 215.92 101.94 89.88 66.63 49.13 123.33 65.25 39.15 61.55 0.00 10.96 0.00 56 ER19a ExonRegion 0 123.77 281.65 120.99 87.39 115.79 49.00 141.95 98.22 15.50 114.14 126.33 192.22 82.65 101.23 74.35 81.26 104.53 65.28 45.22 71.90 0.00 8.45 1.16 57 E19a_E20a KnownJunction 0 195.37 268.70 157.42 116.04 125.21 41.57 138.10 113.86 17.82 123.97 103.76 166.85 79.70 96.36 163.30 123.47 102.85 102.02 59.20 99.26 0.00 20.88 4.35 58 ER20a ExonRegion 0 159.19 254.84 167.96 114.62 136.16 39.17 118.44 104.96 20.41 127.60 136.10 166.63 51.17 122.71 115.06 97.21 112.77 120.18 50.63 104.43 2.35 7.00 3.51 59 E20a_E21a KnownJunction 0 153.81 299.75 150.53 121.20 94.14 29.13 91.37 105.19 22.57 100.52 102.82 144.50 53.24 143.86 117.81 94.93 92.01 194.13 27.20 109.11 3.15 0.00 4.27 60 ER21a ExonRegion 0 121.63 256.18 126.21 85.50 90.84 37.16 100.63 87.66 22.23 107.18 140.48 84.94 35.31 118.02 122.36 123.68 98.67 172.06 41.90 92.24 2.47 8.91 1.99 61 E21a_E22a KnownJunction 0 111.80 146.29 144.44 66.59 74.53 13.63 61.47 86.58 20.75 100.28 100.45 56.87 44.96 99.42 161.69 138.34 107.99 156.86 78.87 66.35 0.00 8.63 0.00 62 ER22a ExonRegion 0 64.03 97.13 80.63 66.17 74.02 25.19 54.77 74.44 17.59 75.89 67.43 45.95 30.56 55.61 84.43 74.20 58.52 72.69 31.96 57.23 1.25 6.79 1.22 63 IG4_AR1 ActiveIntergenicRegion 0 7.00 25.33 18.13 15.01 28.13 6.07 10.82 14.04 5.02 15.97 1.88 5.70 2.42 4.95 2.16 5.79 4.50 24.84 8.68 9.53 0.43 0.00 0.00 64 IG4_AR3 ActiveIntergenicRegion 0 15.34 0.57 1.02 0.00 5.22 1.02 0.37 2.87 0.00 0.48 0.00 0.09 11.46 1.81 3.09 0.83 0.00 0.00 0.00 0.00 0.00 0.58 0.00