Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TARSL2 Gene 0 64.23 120.20 61.86 57.07 56.70 142.05 36.97 56.40 52.99 46.67 30.94 34.79 42.06 27.45 30.53 27.25 25.23 16.36 23.85 31.32 42.26 40.86 27.92 2 335968 Transcript 0 24.88 54.34 40.95 32.40 39.83 140.05 27.42 41.56 52.98 43.77 32.78 34.82 44.66 28.88 19.83 30.82 25.70 18.09 20.42 26.02 49.62 35.82 40.36 3 333018 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 IG16_SR9 SilentIntergenicRegion 0 3.39 4.07 0.00 0.00 2.68 3.67 0.00 0.00 0.00 1.15 15.27 0.00 0.00 12.51 2.90 4.46 6.27 0.00 1.91 0.00 0.44 0.00 2.06 5 IG16_AR9 ActiveIntergenicRegion 0 2.44 3.45 0.00 0.00 1.38 3.22 0.00 0.00 0.00 0.94 12.59 0.00 0.00 7.33 2.29 0.00 1.50 0.00 0.00 0.00 0.00 0.00 0.00 6 IG16_SR7 SilentIntergenicRegion 0 0.03 0.00 0.00 1.48 0.00 0.08 0.00 0.10 0.00 0.00 19.77 0.00 5.63 15.45 4.48 4.33 9.62 0.00 0.05 4.74 9.66 7.59 8.56 7 IG16_AR8 ActiveIntergenicRegion 0 15.39 9.93 11.71 2.94 19.19 33.78 5.30 21.87 6.82 7.98 72.04 24.06 13.71 36.14 11.27 11.72 29.52 6.04 13.60 31.71 35.94 17.23 41.06 8 IG16_AR7 ActiveIntergenicRegion 0 9.59 5.03 24.26 7.38 8.21 18.77 4.86 19.35 11.34 11.50 35.44 11.64 20.60 20.38 24.26 5.89 16.76 5.85 13.48 17.84 35.23 13.94 28.32 9 IG16_AR5 ActiveIntergenicRegion 0 5.21 3.69 4.69 1.78 5.51 9.88 6.24 1.47 1.81 3.36 10.39 5.90 5.36 2.96 4.20 3.66 5.68 1.45 0.52 7.70 6.07 5.47 5.79 10 IG16_SR4 SilentIntergenicRegion 0 5.54 7.46 1.59 1.42 3.97 17.13 5.67 2.49 0.99 4.64 5.74 4.74 6.63 2.01 2.01 1.30 3.17 1.77 0.28 5.95 2.69 3.09 5.13 11 IG16_AR3 ActiveIntergenicRegion 0 5.82 1.43 4.18 1.26 4.49 22.50 4.66 4.48 5.11 6.50 14.18 4.79 15.16 2.94 4.96 4.91 9.71 6.40 0.00 13.62 7.28 5.98 17.33 12 IG16_SR3 SilentIntergenicRegion 0 1.86 3.02 2.76 1.02 8.67 12.68 5.17 3.22 1.69 3.11 9.04 4.24 5.64 3.33 3.41 2.02 7.22 4.42 0.38 6.09 5.47 4.23 9.36 13 IG16_AR2 ActiveIntergenicRegion 0 2.36 2.09 0.91 0.24 6.39 16.29 4.17 3.37 3.96 5.26 6.67 1.86 5.79 1.21 1.44 1.15 3.95 0.70 0.00 5.70 0.26 4.28 2.35 14 IG16_AR1 ActiveIntergenicRegion 0 1.89 10.63 3.83 0.88 6.19 48.84 4.64 11.83 6.28 7.40 8.12 2.51 2.58 0.30 1.18 0.42 5.88 5.38 2.13 7.38 3.82 8.79 8.20 15 IG16_SR1 SilentIntergenicRegion 0 1.35 9.05 8.83 4.65 5.10 34.05 1.35 14.74 9.36 14.13 9.34 4.08 4.14 4.17 1.78 1.51 4.62 5.03 0.00 9.47 5.61 7.68 16.06 16 ER1a ExonRegion 0 0.55 0.64 0.42 0.00 0.00 4.71 1.51 0.36 1.02 1.10 3.26 0.00 0.00 1.76 2.14 2.92 1.52 2.12 0.92 2.19 4.89 2.08 1.21 17 E1_Ab KnownBoundary 0 3.04 9.14 5.59 0.00 0.00 37.19 15.85 2.51 7.84 5.29 9.90 0.00 0.00 4.77 17.80 18.20 15.24 11.23 9.22 7.99 34.10 5.02 10.84 18 ER1b ExonRegion 0 4.54 10.80 10.24 4.80 3.36 25.32 4.38 7.45 11.38 7.18 13.80 4.44 1.12 8.26 11.38 5.27 9.74 5.80 6.98 9.62 26.02 6.34 9.92 19 E1a_E2a KnownJunction 0 3.78 33.09 22.62 14.58 7.89 107.84 29.46 29.29 24.57 17.94 33.32 6.15 0.00 12.36 4.45 12.73 22.44 20.23 0.00 28.51 70.80 8.57 7.85 20 ER2a ExonRegion 0 19.31 36.60 26.21 23.53 25.42 121.13 30.95 27.37 37.95 34.09 39.46 24.17 26.51 22.51 25.83 27.08 33.51 20.74 11.19 40.60 70.86 22.14 24.92 21 E2a_E3a KnownJunction 0 40.30 55.45 35.21 34.46 32.34 122.94 24.55 31.59 66.46 54.69 65.91 58.22 54.87 38.91 30.78 28.28 16.92 29.72 26.35 29.53 85.01 18.00 37.13 22 ER3a ExonRegion 0 27.80 47.73 43.40 35.20 30.09 117.53 24.43 49.98 65.52 53.39 62.02 54.50 60.97 40.13 32.13 44.20 36.34 31.41 34.84 52.04 92.47 44.06 36.39 23 E3_Da NovelBoundary 0 3.78 14.87 2.57 10.02 0.00 5.05 0.00 9.78 4.46 16.71 13.69 18.61 13.15 5.47 10.51 4.36 14.31 2.57 0.00 5.82 5.87 2.63 10.59 24 E3a_E4a KnownJunction 0 16.23 101.30 47.49 26.97 33.02 87.05 45.49 34.42 62.27 52.14 27.80 54.92 20.45 22.72 4.45 28.03 21.97 32.13 22.78 15.60 63.45 29.88 27.74 25 I3_SR1 SilentIntronRegion 0 6.55 3.39 2.06 1.69 3.83 1.75 5.25 2.49 1.90 2.70 2.30 6.98 10.61 1.82 3.52 2.83 3.15 0.00 3.80 1.95 4.17 10.62 7.00 26 I3_AR1 ActiveIntronRegion 0 2.83 7.98 2.67 2.57 2.57 3.99 4.78 5.62 4.19 4.08 2.28 9.82 19.77 1.17 1.60 3.55 0.05 1.23 0.82 4.23 2.35 12.95 2.48 27 E4_Aa NovelBoundary 0 3.33 0.00 5.97 6.69 7.81 2.84 1.81 0.00 4.95 0.00 0.00 0.00 23.38 0.00 0.00 6.49 0.00 0.00 0.00 0.00 3.09 6.25 0.00 28 ER4a ExonRegion 0 14.38 76.40 38.39 31.44 33.18 119.75 30.39 46.54 67.62 47.30 38.00 39.04 33.58 33.57 27.46 45.96 26.97 23.41 23.98 45.17 74.89 35.08 45.39 29 E4_Da NovelBoundary 0 10.15 47.95 21.58 18.31 32.00 93.87 26.76 35.94 40.68 26.35 12.85 0.00 30.68 27.78 18.67 35.55 15.71 24.58 8.66 11.38 39.35 23.76 48.66 30 E4a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31 E4_Db NovelBoundary 0 3.78 6.25 7.89 5.13 0.00 0.00 6.36 0.00 5.12 0.00 2.68 0.00 0.00 2.30 4.45 0.00 0.00 2.57 17.69 3.13 5.75 4.96 0.00 32 E4b_E5a KnownJunction 0 3.11 55.52 43.23 26.77 46.52 156.39 22.74 42.14 50.26 42.93 31.80 56.42 55.19 42.20 24.35 33.41 25.90 33.95 21.55 22.95 83.58 43.17 42.34 33 ER4b ExonRegion 0 5.29 52.03 37.07 28.05 39.91 145.63 26.26 40.33 54.45 42.44 25.77 37.52 54.72 39.93 26.35 37.65 25.86 32.80 24.16 21.81 74.56 40.98 54.57 34 E5_Aa NovelBoundary 0 0.00 2.76 1.83 2.00 0.00 2.16 0.00 0.00 1.79 2.79 2.32 0.00 0.00 0.00 0.00 7.01 9.54 0.00 0.00 2.56 18.35 5.94 8.11 35 ER5a ExonRegion 0 17.56 57.31 51.55 33.52 43.08 165.33 21.43 45.78 60.87 51.87 40.16 36.37 35.75 33.91 21.36 42.66 26.54 28.49 37.73 34.20 69.45 35.16 39.79 36 E5a_E6a KnownJunction 0 47.27 105.77 72.26 59.33 65.96 164.85 43.54 66.29 77.46 62.75 40.54 30.01 69.48 39.91 43.02 70.92 20.38 19.40 13.46 34.77 91.43 73.42 94.50 37 E6_Aa NovelBoundary 0 3.26 6.71 7.21 6.69 7.47 8.18 0.00 17.37 0.00 8.03 0.00 0.00 0.00 0.00 0.00 3.42 0.00 1.82 0.00 0.00 0.00 0.00 4.35 38 ER6a ExonRegion 0 43.75 74.79 53.40 52.78 39.98 188.03 47.42 60.09 80.25 64.55 44.33 42.16 70.27 49.08 24.44 39.85 38.74 19.35 31.77 44.93 57.22 40.51 42.36 39 E6a_E7a KnownJunction 0 52.90 70.18 53.99 49.64 64.77 230.61 41.25 56.15 80.99 67.10 57.07 51.92 48.37 29.02 8.90 21.53 42.82 15.21 27.11 36.50 31.69 42.43 39.95 40 E7_Aa NovelBoundary 0 22.60 12.83 5.06 3.03 0.00 0.00 6.23 8.13 5.84 10.21 0.00 0.00 12.99 0.00 4.45 0.00 0.00 0.00 0.00 6.52 9.27 0.00 13.06 41 ER7a ExonRegion 0 52.79 72.85 45.63 37.40 52.96 201.83 41.28 59.84 67.57 56.91 51.45 42.15 66.90 23.02 27.22 28.41 48.45 10.49 27.08 35.42 33.70 41.85 43.70 42 E7_Ab KnownBoundary 0 79.57 105.24 51.68 36.86 52.38 220.84 55.82 73.81 70.75 58.02 46.91 38.26 80.68 28.90 63.79 42.72 53.30 8.83 28.14 38.80 31.94 48.50 48.32 43 E7a_E8a KnownJunction 0 51.49 144.71 64.90 54.31 37.35 133.73 37.41 73.44 100.32 73.20 32.06 18.01 52.76 38.32 8.90 37.08 44.13 25.16 40.00 66.22 48.00 54.44 34.83 44 ER7b ExonRegion 0 45.95 102.73 51.15 45.77 36.77 150.61 37.24 71.76 88.77 66.63 41.96 29.75 62.33 37.15 32.10 35.57 50.68 14.96 29.70 49.14 35.90 49.40 34.86 45 ER8a ExonRegion 0 44.15 108.24 54.06 56.10 52.77 220.82 28.26 62.47 78.41 78.60 48.74 57.49 83.35 45.23 32.39 32.66 35.89 17.31 32.90 45.68 43.68 45.49 45.57 46 E8a_E9a KnownJunction 0 60.97 147.14 47.01 76.35 51.87 238.27 30.47 80.92 61.08 64.93 54.22 86.88 48.21 41.62 41.66 35.89 55.17 11.32 21.65 39.56 35.71 56.82 43.36 47 ER9a ExonRegion 0 44.69 110.35 50.45 66.56 66.31 206.82 55.62 84.14 74.98 72.86 53.06 81.82 106.91 42.80 34.97 28.41 50.52 22.50 30.66 40.85 42.87 48.01 39.83 48 E9a_E10a KnownJunction 0 32.89 112.94 60.61 63.13 51.44 191.31 78.83 98.17 60.13 68.63 64.65 86.43 87.49 30.73 23.24 60.58 83.59 27.07 39.81 32.15 54.55 50.76 56.77 49 ER10a ExonRegion 0 44.53 129.80 70.51 62.20 57.73 166.08 53.91 82.77 63.40 77.12 45.12 88.64 103.56 48.87 36.13 38.28 58.38 25.94 42.79 43.80 55.47 71.79 45.47 50 E10a_E11a KnownJunction 1 39.86 183.98 54.52 57.14 48.30 253.49 44.43 63.46 41.81 58.61 31.11 141.80 137.49 34.55 30.04 42.64 40.49 27.28 24.47 33.30 52.82 50.95 27.91 51 I10_AR1 ActiveIntronRegion 0 15.56 10.21 4.55 6.78 9.58 20.89 11.70 2.73 11.10 12.27 4.40 6.93 9.96 9.48 3.04 6.57 4.81 0.21 4.55 7.21 12.80 11.93 16.59 52 ER11a ExonRegion 0 55.87 191.75 69.57 61.44 64.46 190.67 47.22 63.22 63.88 64.71 39.57 74.82 63.25 41.02 31.98 42.23 29.53 34.51 35.90 43.23 65.15 56.14 38.55 53 E11a_E12a KnownJunction 0 70.31 329.48 99.70 70.05 75.81 176.55 41.29 64.90 72.13 74.17 44.85 23.41 82.30 30.61 40.79 51.18 28.80 23.26 87.53 79.70 66.66 64.23 47.97 54 ER12a ExonRegion 0 80.23 233.35 83.94 67.49 69.45 180.11 57.11 68.16 67.04 54.02 24.35 31.05 35.85 37.41 39.48 31.53 34.18 29.63 41.06 48.31 71.95 44.42 35.04 55 E12a_E13a KnownJunction 0 94.61 280.54 80.87 68.99 157.05 192.50 80.24 77.26 51.91 55.52 9.63 26.41 39.12 33.85 67.50 38.96 34.97 15.46 52.99 31.96 85.13 37.05 27.91 56 ER13a ExonRegion 0 86.87 243.59 98.82 81.23 73.20 221.00 56.27 83.33 62.58 49.60 28.98 17.91 34.67 41.09 38.43 36.85 37.41 26.90 45.73 47.10 73.90 51.45 37.47 57 E13a_E14a KnownJunction 0 88.09 328.49 89.12 92.53 40.41 125.72 41.29 85.84 77.72 61.46 39.64 18.91 33.28 28.90 52.17 32.38 26.65 27.36 35.30 42.95 62.89 38.27 33.97 58 I13_SR2 SilentIntronRegion 0 6.17 3.65 3.79 6.70 1.36 5.42 3.27 3.26 4.08 2.13 2.15 3.45 2.11 1.12 1.33 3.30 3.14 0.77 1.86 1.88 9.16 3.13 4.69 59 ER14a ExonRegion 0 84.96 292.78 94.95 87.10 62.78 151.43 41.40 81.84 68.30 57.17 31.62 18.48 43.35 40.64 54.86 32.77 28.06 19.69 32.67 42.53 71.85 37.61 31.74 60 E14a_E15a KnownJunction 0 102.61 306.98 112.65 72.85 69.78 154.17 34.31 82.48 59.43 60.98 32.43 12.60 43.50 36.49 42.52 39.22 41.80 10.11 48.75 33.81 53.50 52.84 46.35 61 ER15a ExonRegion 1 94.97 217.75 93.21 86.05 81.39 164.57 50.97 71.67 65.40 53.40 46.24 21.56 62.78 30.22 43.63 36.02 29.12 14.05 46.96 43.86 41.33 54.50 32.30 62 E15a_E16a KnownJunction 0 171.51 162.93 114.28 106.71 176.74 318.23 104.31 63.38 47.68 58.13 27.90 50.27 46.43 36.49 52.78 39.99 27.86 14.30 36.90 33.94 25.70 37.29 62.14 63 I15_AR3 ActiveIntronRegion 0 9.98 16.27 2.45 11.88 16.82 21.22 7.94 8.64 11.12 8.03 1.93 12.99 22.78 4.87 0.00 0.00 3.30 3.70 0.00 7.60 6.61 13.99 4.61 64 I15_AR4 ActiveIntronRegion 0 8.55 12.34 1.59 10.10 9.82 16.49 6.09 8.45 12.36 5.55 3.65 7.43 34.82 2.59 0.28 4.82 1.15 1.82 0.86 8.36 3.82 10.33 4.38 65 I15_AR5 ActiveIntronRegion 0 13.42 15.06 2.39 7.53 9.77 14.63 5.24 5.11 5.44 5.30 2.15 4.57 7.33 1.17 1.39 1.09 0.93 0.00 0.04 3.49 1.50 8.51 1.88 66 I15_SR4 SilentIntronRegion 0 22.16 9.81 1.26 7.23 8.30 14.89 3.40 5.64 4.72 3.38 2.77 3.20 10.46 2.42 4.17 3.14 0.00 0.00 1.81 2.82 1.67 8.66 2.66 67 E16_Aa NovelBoundary 0 45.42 18.55 10.47 16.75 4.33 42.25 10.69 4.48 8.91 16.36 6.79 5.70 16.56 4.24 13.72 7.01 0.00 0.00 4.61 6.20 2.84 14.33 0.00 68 ER16a ExonRegion 0 160.96 196.91 111.44 117.34 157.16 303.17 81.90 77.20 54.78 60.25 36.69 34.31 57.58 35.75 59.30 34.02 27.19 12.16 28.40 42.01 45.63 52.54 45.36 69 E16_Da NovelBoundary 0 6.08 3.35 1.39 4.53 4.33 0.00 10.91 3.49 5.50 3.17 1.95 0.00 19.32 2.41 0.00 0.00 4.39 0.00 0.00 3.26 5.56 16.47 0.00 70 E16a_E17a KnownJunction 0 168.25 227.26 105.41 128.72 121.73 188.70 53.88 86.46 81.39 57.89 28.85 32.56 53.57 53.33 73.06 35.89 27.30 21.72 35.30 29.08 66.35 78.13 36.02 71 E16a_E18a NovelJunction 0 13.34 19.73 3.81 0.00 10.02 0.00 8.30 7.27 4.48 10.31 4.84 0.00 8.28 0.00 8.90 7.43 3.74 0.00 0.00 0.00 0.00 3.12 0.00 72 ER17a ExonRegion 0 130.12 203.11 107.28 104.90 91.49 197.07 54.37 86.64 68.61 59.07 41.89 22.83 57.89 42.29 35.85 30.05 35.90 19.84 25.18 39.58 61.67 60.76 35.44 73 E17_Da NovelBoundary 0 22.97 6.71 1.77 17.68 8.15 8.29 16.12 9.69 5.93 2.93 5.05 0.00 13.31 2.30 0.00 7.26 0.00 0.00 0.00 0.00 2.90 6.12 0.00 74 E17a_E18a KnownJunction 1 172.33 229.70 94.17 106.81 132.68 220.21 54.89 96.65 59.00 50.58 53.22 6.90 71.91 32.26 35.23 23.75 27.30 11.07 17.60 43.66 37.56 63.68 44.90 75 I17 Intron 0 12.07 15.12 1.89 9.48 8.79 5.07 3.89 6.68 3.82 4.43 4.34 1.98 6.82 2.87 1.53 3.08 3.42 0.32 0.55 2.21 3.43 8.64 2.54 76 I17_SR1 SilentIntronRegion 0 12.16 15.22 1.91 9.54 8.85 5.11 3.92 6.73 3.84 4.46 4.37 1.99 6.87 2.89 1.54 3.10 3.45 0.32 0.55 2.22 3.45 8.70 2.56 77 ER18a ExonRegion 0 152.19 259.75 96.27 106.92 110.75 224.09 69.66 88.27 75.32 55.59 47.52 32.11 59.22 32.06 50.38 46.24 37.77 16.04 19.80 46.05 41.93 67.63 32.02 78 E18a_E19a KnownJunction 0 289.90 312.05 111.38 102.88 166.72 264.11 78.39 86.87 69.62 65.09 43.17 37.51 46.91 34.32 60.70 49.65 37.77 11.11 47.91 37.26 42.63 87.87 43.79 79 ER19a ExonRegion 0 104.31 138.90 83.85 79.34 78.70 148.60 41.20 70.70 56.89 51.64 23.72 35.18 36.29 20.49 35.89 23.24 17.03 10.40 18.34 23.05 21.07 51.26 21.67 80 E19_Da KnownBoundary 1 0.00 0.00 16.17 7.99 0.00 0.00 0.00 8.09 7.84 3.60 0.00 25.96 0.00 7.12 0.00 0.00 0.00 4.52 0.00 0.00 0.00 11.39 18.78 81 ER19b ExonRegion 1 0.74 0.00 11.04 4.11 5.33 3.06 1.35 3.11 3.91 4.27 0.67 16.82 1.27 1.06 0.67 0.00 1.09 0.95 0.00 1.40 0.00 2.80 4.83