Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RCCD1 Gene 0 49.77 98.03 79.80 98.91 40.39 113.64 56.33 59.98 33.41 77.42 97.73 56.04 30.19 105.33 87.43 88.64 83.89 140.21 77.81 85.58 33.63 20.79 32.38 2 394258 Transcript 1 13.56 2.70 8.72 18.81 23.95 88.54 32.59 3.90 2.43 14.76 54.17 0.00 0.00 60.91 41.57 47.34 42.08 59.46 37.80 23.87 25.71 6.86 25.03 3 300233 Transcript 0 4.23 1.36 8.17 7.72 8.03 32.40 9.27 1.73 0.82 8.03 25.77 0.00 0.00 20.03 15.47 18.82 16.50 23.40 13.80 8.51 10.28 2.78 9.79 4 ER1a ExonRegion 1 9.86 5.40 5.49 8.63 21.08 76.29 30.87 1.52 1.76 10.86 52.85 0.00 0.00 56.84 44.08 56.23 53.31 27.39 33.25 20.64 25.84 5.77 34.27 5 E1a_E2b KnownJunction 0 17.26 0.00 11.95 29.00 26.83 100.79 34.31 6.28 3.10 18.67 55.49 0.00 0.00 64.98 39.06 38.45 30.86 91.53 42.35 27.10 25.58 7.96 15.79 6 Ix_AR2 ActiveIntronRegion 0 1.70 4.90 9.60 4.57 3.99 28.39 13.31 10.37 3.34 9.35 17.15 6.59 2.64 14.75 8.83 21.81 36.08 23.84 9.33 16.81 1.99 0.00 6.74 7 Ix_SR2 SilentIntronRegion 0 2.99 0.57 2.26 1.33 3.71 5.36 4.81 2.74 2.65 8.62 10.55 7.03 0.05 19.17 14.38 14.60 21.14 13.72 9.70 10.85 1.14 0.59 5.21 8 ER2a ExonRegion 0 4.23 1.36 8.17 7.72 8.03 32.40 9.27 1.73 0.82 8.03 25.77 0.00 0.00 20.03 15.47 18.82 16.50 23.40 13.80 8.51 10.28 2.78 9.79 9 ER2b ExonRegion 1 5.28 4.49 25.86 15.99 3.93 33.07 12.63 10.66 3.97 23.93 52.09 9.02 6.74 69.74 51.25 58.32 49.35 69.35 39.65 22.36 18.24 7.34 23.93 10 E2_Da NovelBoundary 0 0.00 3.22 31.05 14.05 28.27 91.08 22.79 18.61 4.66 41.23 38.96 7.35 0.00 26.02 19.16 23.07 21.32 45.85 9.13 20.26 20.14 2.76 3.33 11 E2a_E3a KnownJunction 0 10.30 6.45 11.56 14.08 7.39 45.88 23.94 7.27 9.32 26.30 34.43 0.00 6.01 38.20 22.99 23.50 26.93 34.28 4.80 21.09 5.50 0.00 0.00 12 Ix Intron 0 11.71 1.47 11.42 9.28 2.57 19.41 3.82 6.20 1.77 14.80 13.95 4.29 8.56 21.93 17.12 12.15 9.53 26.73 15.33 9.21 6.36 0.50 9.18 13 Ix_AR1 ActiveIntronRegion 0 11.82 1.48 11.53 9.37 2.60 19.60 3.86 6.26 1.79 14.94 14.07 4.33 8.64 22.13 17.28 12.27 9.62 26.99 15.47 9.29 6.42 0.51 9.27 14 ER3a ExonRegion 1 11.51 15.65 33.77 16.70 8.92 45.19 15.03 21.65 14.09 43.13 64.89 7.13 6.74 95.79 68.21 56.71 55.60 116.29 24.93 57.68 32.52 8.97 19.60 15 E3a_E4a KnownJunction 1 24.60 15.72 35.42 26.90 19.52 62.86 22.13 34.67 31.86 46.31 84.65 6.30 6.82 147.27 86.66 50.76 60.59 183.43 55.91 71.01 46.21 14.14 17.41 16 ER4a ExonRegion 1 21.63 25.15 59.12 44.74 17.70 75.73 22.61 42.84 26.27 58.72 82.70 10.36 12.30 123.57 85.49 74.60 74.22 157.82 63.11 70.00 45.30 13.94 26.57 17 E4a_E5a KnownJunction 1 59.20 89.72 65.02 76.05 37.69 177.45 48.98 70.77 32.41 82.12 147.04 25.96 13.31 234.15 132.89 148.17 130.43 324.37 119.63 150.40 62.52 21.43 47.63 18 ER5a ExonRegion 1 52.10 67.77 88.78 79.42 23.62 125.62 47.94 53.15 45.55 90.80 149.81 19.81 14.73 190.43 104.53 112.34 146.77 248.08 93.31 98.60 63.24 27.95 51.05 19 E5a_E6a KnownJunction 1 83.72 60.91 113.42 77.55 23.43 107.15 71.23 59.39 46.61 94.96 117.71 18.31 14.93 158.40 157.36 89.12 150.16 165.61 137.89 106.93 62.33 29.51 64.53 20 E6_Aa NovelBoundary 0 13.71 18.68 16.62 12.69 3.23 2.21 14.18 8.09 6.77 18.19 14.53 0.00 18.67 7.12 10.38 19.57 13.65 25.49 8.38 14.38 2.78 0.00 0.00 21 ER6a ExonRegion 1 41.51 69.89 115.83 95.10 27.82 140.61 54.43 72.01 40.40 113.72 160.58 51.50 16.81 172.42 124.84 137.52 149.04 240.41 127.53 120.39 65.27 28.15 61.64 22 E6_Da NovelBoundary 0 16.30 14.73 50.89 14.58 7.64 16.98 7.77 24.89 12.15 53.08 29.17 17.71 12.82 21.54 13.35 18.71 25.53 90.08 12.89 32.41 16.68 3.00 10.84 23 E6a_E7a KnownJunction 0 50.01 81.83 98.64 88.47 55.69 188.07 57.37 68.02 44.47 102.75 128.14 56.42 35.06 147.63 130.79 203.45 139.04 244.33 71.53 106.49 47.51 36.99 46.35 24 Ix Intron 0 14.98 16.96 28.86 24.02 8.30 37.34 12.32 16.73 14.81 26.02 22.11 8.47 7.20 29.56 16.78 31.12 20.16 52.27 25.01 28.47 11.53 5.25 14.81 25 Ix_SR1 SilentIntronRegion 0 8.16 8.72 21.86 15.24 4.47 13.05 6.43 8.00 8.70 20.15 13.70 5.50 1.94 27.19 20.68 36.98 14.81 50.05 32.04 29.79 9.79 2.11 22.23 26 Ix_AR1 ActiveIntronRegion 0 16.10 18.30 30.06 25.48 8.92 41.25 13.29 18.15 15.82 27.04 23.51 8.96 8.04 30.05 16.25 30.36 21.08 52.84 24.04 28.39 11.85 5.76 13.73 27 ER7a ExonRegion 0 25.54 57.41 90.76 56.79 40.76 145.18 38.75 61.13 31.54 84.72 132.79 57.15 24.39 169.67 113.44 179.12 136.33 230.29 70.61 94.40 50.02 35.28 41.80 28 Ix Intron 0 30.10 55.45 50.12 66.78 25.69 71.59 46.89 26.60 18.34 54.97 30.12 20.88 14.99 46.16 35.33 40.94 38.27 122.23 59.44 51.46 31.53 11.89 27.40 29 Ix_AR1 ActiveIntronRegion 0 30.21 55.64 50.30 67.02 25.78 71.83 47.06 26.70 18.41 55.16 30.22 20.95 15.04 46.32 35.45 41.07 38.40 122.66 59.65 51.64 31.64 11.93 27.49 30 E8_Aa NovelBoundary 0 49.05 148.00 72.65 129.39 51.61 131.63 102.81 53.60 42.71 89.48 43.27 5.40 13.64 77.40 45.99 105.27 58.16 270.19 116.99 63.53 41.33 14.51 53.10 31 ER8a ExonRegion 0 73.78 153.89 102.59 147.61 60.88 147.39 80.58 82.76 44.68 96.29 107.27 87.14 46.38 101.16 95.85 96.67 87.66 143.97 95.79 104.49 30.47 26.16 32.99