Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ADAMTS17 Gene 0 6.47 18.18 21.42 7.42 2.94 26.52 3.05 4.23 4.15 13.11 0.36 0.73 0.56 0.51 0.78 0.36 0.35 132.29 18.78 25.56 0.71 0.93 1.09 2 268070 Transcript 0 3.59 11.93 18.73 6.04 2.05 28.27 2.01 3.87 3.90 15.70 0.04 0.10 0.08 0.07 0.11 0.05 0.05 154.61 14.06 22.38 0.13 0.53 0.99 3 378898 Transcript 0 0.00 3.98 3.89 1.55 2.03 11.35 0.34 1.25 1.94 9.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 81.38 10.91 16.32 0.00 0.00 0.00 4 ER1a ExonRegion 0 0.00 1.60 0.39 0.00 0.00 1.64 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.01 3.75 4.03 0.00 0.00 0.52 5 ER1b ExonRegion 0 0.00 3.02 2.30 0.00 0.00 3.88 0.39 0.00 0.60 1.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.12 9.64 9.59 0.00 0.00 0.86 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 0.00 10.93 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.32 0.51 0.35 0.76 2.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.90 3.86 4.05 0.00 0.00 0.78 8 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45.18 8.85 3.26 0.00 0.00 0.00 9 ER3a ExonRegion 0 1.30 0.42 5.77 0.60 0.00 14.80 0.81 1.58 3.10 3.86 1.13 0.00 0.00 0.00 0.00 0.00 0.00 79.94 15.79 19.74 0.68 0.00 0.09 10 E3a_E4a KnownJunction 0 0.00 3.16 6.62 0.00 0.00 31.74 2.03 0.00 2.95 6.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 70.55 4.42 20.71 0.00 0.00 0.00 11 ER4a ExonRegion 0 2.72 5.08 8.68 0.62 0.00 8.50 2.42 0.27 1.76 6.94 0.06 0.00 0.00 0.00 0.00 0.00 0.00 86.55 13.05 20.93 1.95 0.00 0.85 12 E4a_E5a KnownJunction 0 17.71 6.51 14.72 0.00 3.99 29.30 0.00 2.38 1.62 8.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 142.56 20.05 54.90 5.25 0.00 0.00 13 ER5a ExonRegion 0 6.50 1.57 8.23 0.78 2.45 19.34 1.26 1.38 3.59 9.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 144.12 24.99 25.73 1.34 0.00 3.57 14 E5a_E6a KnownJunction 0 3.78 3.09 10.20 1.96 4.24 18.00 5.30 2.01 0.00 6.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 155.53 20.71 14.38 0.00 0.00 0.00 15 ER6a ExonRegion 0 3.23 6.29 9.21 1.93 2.15 14.25 2.51 1.95 2.12 6.87 1.25 0.00 0.00 0.00 0.00 0.00 0.00 151.01 22.36 24.55 0.00 0.46 0.95 16 E6a_E7a KnownJunction 0 6.59 2.83 4.76 2.06 3.74 9.60 2.25 2.55 8.30 9.05 2.21 0.00 0.00 0.00 0.00 0.00 0.00 176.18 37.55 24.42 0.00 2.88 0.00 17 ER7a ExonRegion 0 2.12 0.92 7.52 1.83 0.00 12.50 1.02 2.00 3.17 7.06 1.45 0.00 0.00 0.00 0.00 0.00 0.00 201.11 24.98 29.55 0.20 0.76 0.00 18 E7a_E8a KnownJunction 0 0.00 5.39 9.58 1.76 0.00 14.03 0.00 2.05 0.00 4.75 2.58 0.00 0.00 0.00 0.00 0.00 0.00 189.57 26.26 22.50 0.00 0.00 0.00 19 ER8a ExonRegion 0 1.48 6.47 16.89 4.67 1.29 16.52 2.49 3.77 1.69 12.48 0.33 0.00 0.00 0.00 0.00 0.00 0.00 247.91 31.85 37.41 0.98 0.45 1.41 20 E8a_E9a KnownJunction 0 3.78 0.00 16.88 1.53 0.00 7.10 0.00 2.18 1.16 11.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 240.60 25.79 56.31 0.00 3.12 0.00 21 ER9a ExonRegion 0 1.19 10.07 15.11 4.25 0.85 8.23 2.42 4.52 2.93 9.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 200.02 22.57 29.20 0.80 1.17 1.06 22 E9a_E10a KnownJunction 0 0.00 3.35 23.00 3.00 3.14 21.12 0.00 4.93 1.53 15.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 228.08 21.27 35.54 0.00 0.00 0.00 23 E10_Aa NovelBoundary 0 10.67 12.37 9.05 2.06 0.00 2.73 6.14 2.22 0.00 6.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37.18 0.00 0.00 0.00 0.00 0.00 24 ER10a ExonRegion 0 3.57 9.27 14.16 3.80 1.91 18.13 4.91 5.79 1.68 10.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 195.02 27.15 26.29 0.00 0.00 1.59 25 E10a_E11a KnownJunction 0 0.00 6.71 10.61 2.06 0.00 2.61 0.00 7.02 0.00 6.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 149.36 17.41 25.06 0.00 0.00 4.35 26 ER11a ExonRegion 0 0.10 7.72 12.51 3.54 0.00 8.27 1.54 6.19 1.36 7.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 156.23 20.64 27.03 0.00 0.37 0.58 27 E11a_E12a KnownJunction 0 3.04 5.92 15.32 6.83 0.00 5.68 2.21 2.51 1.79 8.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 159.55 12.61 32.73 0.00 3.00 0.00 28 ER12a ExonRegion 0 1.41 6.56 9.59 4.48 1.87 7.69 3.07 4.05 3.96 7.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 140.02 25.74 18.71 0.00 0.47 1.03 29 E12a_E13a KnownJunction 0 0.00 6.12 6.89 1.80 0.00 13.51 0.00 5.01 3.12 4.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 87.67 9.41 8.44 0.00 0.00 0.00 30 ER13a ExonRegion 0 1.29 4.10 11.07 4.77 0.82 11.64 0.81 2.36 2.25 8.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 107.84 15.89 18.97 0.00 0.64 0.00 31 E13a_E14a KnownJunction 0 0.00 8.62 19.57 5.49 0.00 18.97 0.00 5.63 1.79 7.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 102.02 14.02 8.56 0.00 0.00 0.00 32 ER14a ExonRegion 0 0.00 5.42 14.11 4.33 0.06 9.01 1.06 2.67 2.20 10.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 97.05 16.18 21.71 0.00 0.00 0.00 33 E14a_E15a KnownJunction 0 0.00 11.58 11.41 5.23 0.00 10.39 0.00 4.64 4.34 14.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74.12 0.00 17.26 0.00 0.00 0.00 34 ER15a ExonRegion 0 0.03 3.61 12.72 2.02 1.06 11.55 1.11 3.66 2.78 10.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73.65 8.32 22.56 0.93 0.00 1.31 35 E15a_E16a KnownJunction 0 0.00 3.29 6.45 1.73 0.00 7.78 0.00 0.00 3.15 11.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 91.36 17.32 21.41 0.00 0.00 0.00 36 E15a_E17a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER16a ExonRegion 0 0.00 4.67 1.33 1.36 4.05 14.92 0.68 2.50 0.73 7.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71.40 4.51 11.23 0.00 0.00 0.00 38 E16_Da NovelBoundary 0 3.41 5.85 4.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.62 4.71 3.13 0.00 0.00 0.00 39 I16 Intron 0 1.22 3.10 2.27 1.21 0.36 5.83 0.49 0.49 0.91 1.28 0.05 0.13 0.05 0.00 0.00 0.00 0.00 36.66 6.66 9.36 0.08 0.08 0.11 40 I16_SR1 SilentIntronRegion 0 1.04 2.48 1.85 0.85 0.41 3.61 0.50 0.53 1.02 1.31 0.08 0.03 0.04 0.00 0.00 0.00 0.00 35.87 7.18 9.16 0.14 0.06 0.18 41 I16_SR4 SilentIntronRegion 0 1.58 4.31 3.23 1.93 0.29 10.05 0.48 0.42 0.81 1.34 0.00 0.27 0.07 0.00 0.00 0.00 0.00 40.04 6.11 10.06 0.00 0.11 0.00 42 E17_Aa NovelBoundary 0 2.82 13.29 3.10 4.03 0.00 13.12 0.00 0.00 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43.86 0.00 3.13 0.00 0.00 0.00 43 ER17a ExonRegion 0 4.76 10.99 15.85 4.90 1.68 32.10 1.12 1.13 2.70 10.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 124.00 9.56 24.47 0.00 0.00 1.60 44 E17a_E18a KnownJunction 0 0.00 14.73 20.84 11.12 8.32 53.61 2.25 2.38 8.42 21.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 177.71 13.65 9.78 0.00 0.00 3.76 45 ER18a ExonRegion 0 3.72 14.43 24.38 9.61 3.43 26.69 5.07 2.88 4.15 17.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 147.65 17.74 27.87 0.00 1.33 1.25 46 E18a_E19a KnownJunction 0 10.15 19.73 20.46 3.46 0.00 30.32 2.16 6.61 4.20 18.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 162.54 20.61 29.27 0.00 0.00 0.00 47 ER19a ExonRegion 0 5.15 22.17 18.58 4.98 1.04 31.75 2.16 2.06 3.33 15.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 152.36 14.17 22.15 0.00 1.30 2.12 48 E19a_E20a KnownJunction 0 0.00 14.93 5.56 5.83 0.00 15.96 0.00 1.93 3.50 10.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 131.08 16.57 21.60 0.00 2.94 0.00 49 ER20a ExonRegion 0 3.16 7.53 13.96 4.61 0.65 17.43 1.88 3.16 2.69 10.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 135.12 9.85 28.45 0.00 0.17 0.00 50 E20a_E21a KnownJunction 0 3.56 0.00 19.72 5.66 8.06 31.52 2.03 9.36 3.73 22.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 187.95 8.19 11.63 0.00 0.00 4.18 51 ER21a ExonRegion 0 2.77 7.48 18.17 5.57 0.91 16.32 1.01 8.25 5.02 15.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 226.10 24.40 32.14 0.73 0.00 0.00 52 E21a_E22a KnownJunction 0 3.19 12.43 14.87 10.26 0.00 28.79 0.00 7.89 5.79 22.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 177.42 15.15 21.03 0.00 0.00 0.00 53 I21 Intron 0 0.71 2.57 2.67 0.75 0.48 3.05 0.76 0.79 0.67 1.35 0.07 0.05 0.02 0.01 0.01 0.00 0.00 26.91 2.74 4.10 0.10 0.13 0.08 54 I21_SR1 SilentIntronRegion 0 0.58 2.27 1.96 0.62 0.37 2.53 0.73 0.70 0.57 1.25 0.01 0.07 0.00 0.01 0.00 0.00 0.00 27.26 2.70 4.22 0.01 0.09 0.10 55 I21_AR2 ActiveIntronRegion 0 1.74 4.46 4.59 1.23 0.47 6.80 0.96 0.67 1.17 2.17 0.78 0.00 0.16 0.00 0.23 0.00 0.00 28.54 3.08 2.86 0.73 0.29 0.00 56 I21_SR2 SilentIntronRegion 0 0.95 3.92 7.47 1.32 0.85 3.90 0.37 0.81 1.21 1.57 0.09 0.00 0.00 0.00 0.00 0.00 0.00 27.16 2.23 3.09 0.33 0.27 0.00 57 ER22a ExonRegion 0 2.19 9.87 26.43 5.31 1.53 31.16 1.87 4.25 6.24 24.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 242.74 18.97 33.72 0.00 0.60 0.00 58 E22a_E23a KnownJunction 0 3.78 11.71 49.29 7.13 0.00 66.72 5.92 2.30 2.84 29.17 0.00 0.00 0.00 0.00 0.00 0.00 0.00 303.69 16.19 39.88 0.00 0.00 0.00 59 ER23a ExonRegion 0 11.49 31.28 32.44 12.11 5.05 39.99 4.47 5.90 5.92 17.31 0.60 1.55 1.19 1.07 1.65 0.76 0.73 138.74 22.08 29.74 1.17 1.61 1.41 60 IG1_SR12 SilentIntergenicRegion 0 0.63 2.09 1.65 0.52 0.34 2.11 1.03 0.37 0.14 2.52 0.00 0.00 0.00 0.00 0.13 0.00 0.00 14.16 0.61 3.43 0.00 0.23 0.00 61 IG1_AR16 ActiveIntergenicRegion 0 7.81 0.63 15.90 3.17 6.99 38.21 5.09 9.51 15.23 0.00 36.21 17.05 12.11 13.77 15.01 10.77 9.16 13.42 9.54 30.51 21.78 9.88 13.59 62 IG1_AR14 ActiveIntergenicRegion 0 0.81 0.00 0.70 1.36 0.00 0.00 1.32 0.00 0.00 3.44 0.55 22.88 0.89 1.62 0.00 4.67 0.00 1.94 0.00 8.71 0.31 6.15 12.31 63 IG1_AR13 ActiveIntergenicRegion 0 0.00 0.00 0.00 2.04 0.00 0.00 2.15 1.73 0.77 3.44 1.93 25.98 0.00 1.62 0.00 2.97 0.00 3.70 0.00 8.24 4.68 6.25 10.28 64 IG1_AR12 ActiveIntergenicRegion 0 0.00 0.00 0.00 3.56 0.00 0.00 1.32 3.10 1.24 2.38 1.93 12.54 11.79 0.17 0.00 2.13 0.00 2.13 0.00 2.67 8.53 4.27 4.22 65 IG1_AR9 ActiveIntergenicRegion 0 44.42 1.77 1.65 4.48 17.48 5.04 4.47 0.75 3.52 1.95 1.68 14.32 4.48 0.78 1.01 3.04 0.00 1.61 4.62 3.78 0.00 0.60 2.55 66 IG1_AR8 ActiveIntergenicRegion 0 18.25 1.12 3.44 2.34 13.41 3.25 1.93 0.70 1.18 0.94 1.97 8.87 3.12 0.79 1.71 1.99 0.91 2.36 0.00 9.84 1.22 0.00 3.83 67 IG1_AR7 ActiveIntergenicRegion 0 8.18 0.47 3.47 1.28 3.92 2.64 4.47 4.60 1.92 3.79 19.69 13.82 17.23 12.07 14.43 13.46 7.81 5.60 3.24 10.45 3.72 4.86 5.25 68 IG1_AR6 ActiveIntergenicRegion 0 5.25 0.89 5.27 1.36 3.64 0.59 8.29 0.76 0.00 1.72 7.89 5.28 13.23 0.94 11.55 10.22 8.52 3.47 0.45 12.98 1.32 0.63 6.28 69 IG1_AR5 ActiveIntergenicRegion 0 8.47 0.00 3.61 1.51 2.68 0.00 3.07 2.46 0.00 0.24 3.87 12.08 15.55 1.20 4.73 2.03 10.42 1.85 0.00 4.59 0.00 0.00 2.94 70 IG1_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.83 0.00 2.55 0.00 0.00 0.68 1.04 0.00 1.45 0.00 0.00 0.00 8.20 0.00 0.00