Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC009712.2 Gene 0 5.18 3.23 4.64 4.04 3.92 3.09 5.44 7.51 6.36 2.79 5.69 10.19 14.87 5.59 8.36 11.62 9.08 8.04 7.44 5.56 6.18 2.07 6.53 2 500399 Transcript 0 3.94 2.96 2.61 2.28 2.68 1.58 4.54 3.47 3.28 1.51 2.14 7.16 8.51 2.09 3.83 6.37 4.48 3.36 3.63 3.35 2.54 1.13 3.96 3 499648 Transcript 0 0.85 0.04 0.11 0.04 0.58 0.04 0.08 0.15 0.22 0.00 1.33 1.61 4.36 1.92 3.58 0.57 0.65 0.27 0.38 0.04 0.00 0.20 0.00 4 ER1a ExonRegion 0 0.00 0.00 0.83 0.00 0.00 0.00 0.00 0.59 0.42 0.00 0.00 0.00 0.87 0.15 0.01 0.68 0.00 0.00 0.01 0.48 0.52 0.47 0.00 5 E1_Da NovelBoundary 0 728.28 284.82 161.53 184.69 216.30 131.34 149.76 201.02 150.87 142.77 408.84 425.24 357.44 373.01 642.69 440.06 269.10 221.11 106.92 141.83 226.54 240.46 270.94 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 Ix Intron 0 53.66 21.63 21.33 22.04 33.68 13.53 27.87 22.73 19.70 15.02 40.33 40.25 51.19 35.43 24.43 57.08 36.77 33.64 21.78 16.85 15.86 39.64 30.48 8 Ix_AR1 ActiveIntronRegion 0 72.45 24.21 26.62 26.89 40.33 17.95 32.32 26.58 22.41 16.30 48.98 45.17 62.33 35.34 31.05 56.31 41.30 31.44 23.46 16.04 17.13 45.60 33.89 9 Ix_SR1 SilentIntronRegion 0 28.29 18.21 14.22 15.52 24.76 7.57 21.93 17.60 16.10 13.35 28.72 33.73 36.25 35.73 15.51 58.38 30.78 36.80 19.59 18.05 14.19 31.70 25.99 10 Ix Intron 0 19.48 10.78 16.80 22.49 11.68 7.72 14.45 22.09 17.22 16.53 34.67 10.13 15.96 29.61 17.43 52.39 35.01 48.14 29.31 19.58 22.00 17.22 22.90 11 Ix_AR1 ActiveIntronRegion 0 19.60 10.85 16.91 22.63 11.76 7.77 14.54 22.21 17.33 16.63 34.88 10.19 16.06 29.78 17.54 52.70 35.22 48.43 29.49 19.70 22.13 17.32 23.03 12 Ix Intron 0 10.32 5.37 18.18 16.51 8.16 6.71 9.15 15.70 14.22 10.42 29.46 8.12 11.55 23.29 13.52 44.69 30.85 39.37 18.12 13.83 12.99 18.63 22.08 13 Ix_AR1 ActiveIntronRegion 0 10.40 5.41 18.31 16.64 8.22 6.76 9.22 15.83 14.33 10.50 29.68 8.19 11.64 23.48 13.63 45.04 31.09 39.68 18.27 13.95 13.09 18.78 22.25 14 Ix Intron 0 67.46 32.63 31.19 37.65 55.32 32.08 38.91 39.93 39.51 25.59 122.19 138.29 140.88 140.46 75.67 148.27 85.44 49.91 37.89 33.97 44.27 62.43 67.77 15 Ix_AR1 ActiveIntronRegion 0 131.16 42.71 43.51 43.58 69.03 49.36 40.96 50.56 46.85 29.45 106.35 90.13 62.17 125.57 78.61 161.78 84.60 79.43 47.23 32.28 73.08 58.22 65.19 16 Ix_AR2 ActiveIntronRegion 0 52.35 30.25 28.28 36.27 52.10 28.00 38.45 37.44 37.79 24.69 126.06 149.85 159.73 144.11 75.03 145.17 85.70 42.92 35.69 34.39 37.45 63.48 68.44 17 Ix_SR2 SilentIntronRegion 0 7.36 11.74 4.95 7.76 13.04 7.84 20.42 8.01 7.99 4.60 13.01 24.80 34.75 7.32 6.25 15.85 22.60 8.82 7.49 11.31 6.45 5.76 8.75 18 E2_Aa NovelBoundary 0 14.30 5.72 2.31 13.88 11.71 5.45 9.27 11.21 10.33 7.12 7.11 17.41 33.60 4.83 15.20 29.22 25.43 4.23 9.04 5.24 5.87 3.12 26.55 19 ER2a ExonRegion 0 11.81 8.89 7.01 6.84 8.05 4.73 13.63 9.81 9.42 4.52 6.41 21.48 24.68 6.10 11.49 18.44 13.43 10.09 10.86 9.57 7.09 2.91 11.88 20 E2_Ab KnownBoundary 0 6.82 9.41 17.59 21.91 0.00 0.00 17.97 19.88 20.98 2.98 2.63 52.22 40.26 10.18 9.64 7.52 25.15 7.71 4.71 15.02 0.00 2.88 4.10 21 ER2b ExonRegion 0 6.55 3.68 7.71 6.67 5.58 5.33 6.80 13.46 10.99 4.74 9.50 12.14 20.47 9.43 12.15 18.76 14.93 14.98 13.00 8.97 11.76 3.24 10.50 22 E2_Da KnownBoundary 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.47 0.00 0.00 4.94 4.45 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER2c ExonRegion 0 0.69 0.12 0.32 0.12 0.16 0.11 0.23 0.45 0.11 0.00 2.27 4.84 5.94 2.28 4.97 1.71 1.94 0.00 0.19 0.12 0.00 0.61 0.00 24 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.41 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER3a ExonRegion 0 1.87 0.00 0.00 0.00 1.58 0.00 0.00 0.00 0.54 0.00 1.71 0.00 7.16 1.07 1.32 0.00 0.00 0.81 0.94 0.00 0.00 0.00 0.00