Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC108137.1 Gene 0 14.74 8.16 20.41 7.50 13.05 3.46 11.50 23.98 10.71 4.59 0.47 0.57 1.01 0.59 1.20 1.25 0.47 11.52 32.72 12.43 34.13 49.41 23.98 2 500369 Transcript 0 0.30 0.56 5.55 0.84 0.37 0.00 0.37 1.43 1.81 0.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.75 3.98 0.95 15.29 2.08 4.07 3 502225 Transcript 0 0.61 0.00 0.08 0.00 0.44 0.00 0.18 0.99 0.60 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.31 0.28 0.82 1.75 1.77 0.77 4 ER1a ExonRegion 0 0.61 1.13 4.32 1.69 0.74 0.00 0.73 2.86 1.83 0.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.49 7.96 1.90 24.72 4.17 8.14 5 E1_Da NovelBoundary 0 0.00 3.35 2.96 1.50 0.00 0.00 2.21 0.00 1.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.02 4.71 2.68 12.29 11.88 21.26 6 E1a_E4a KnownJunction 0 0.00 0.00 6.77 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.87 0.00 0.00 7 E2_Aa NovelBoundary 0 7.04 6.05 48.58 9.62 3.14 29.98 3.89 50.73 15.89 12.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 87.09 90.92 26.21 755.72 130.79 141.02 8 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.42 0.00 0.06 2.45 0.25 0.00 9 E2_Da NovelBoundary 0 65.94 4.80 27.62 0.00 0.00 13.23 12.50 56.64 12.27 10.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 135.14 104.00 15.92 584.78 89.65 147.34 10 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 2.88 0.00 11 I2 Intron 0 1.16 0.00 2.01 0.11 0.59 0.10 0.87 1.56 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.83 2.28 0.94 12.47 3.55 4.36 12 I2_AR1 ActiveIntronRegion 0 1.17 0.00 2.44 0.23 0.89 0.20 0.29 1.72 0.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 3.86 0.71 17.37 3.68 5.33 13 I2_SR1 SilentIntronRegion 0 1.16 0.00 1.59 0.00 0.29 0.00 1.44 1.40 2.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.91 0.74 1.16 7.72 3.44 3.42 14 ER3a ExonRegion 0 0.91 0.00 0.39 0.00 0.58 0.00 0.89 0.77 1.99 0.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.17 1.38 2.76 6.32 4.03 3.87 15 E3_Da NovelBoundary 0 0.00 0.00 1.30 0.00 0.00 0.00 0.00 3.20 1.22 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 0.00 12.23 0.00 7.26 16 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.46 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 0.00 0.00 0.00 17 ER4a ExonRegion 0 3.43 0.04 8.05 1.03 4.15 0.47 4.33 9.14 4.38 2.45 0.00 0.00 0.00 0.00 0.01 0.00 0.00 8.70 31.49 9.78 44.92 21.54 24.55 18 E4_Da NovelBoundary 0 6.08 0.00 6.56 3.40 0.00 0.00 0.00 3.61 1.33 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.67 8.94 5.24 22.92 25.47 12.63 19 E4a_E5a KnownJunction 0 3.78 0.00 0.00 0.00 3.14 0.00 0.00 3.82 0.00 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 0.00 3.26 17.92 14.45 0.00 20 I4 Intron 0 2.79 0.77 8.93 0.76 2.52 1.04 3.99 6.79 4.16 2.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.13 26.38 8.41 22.81 21.17 13.26 21 I4_AR1 ActiveIntronRegion 0 2.80 0.77 8.96 0.77 2.53 1.04 4.00 6.81 4.17 2.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.16 26.47 8.44 22.89 21.25 13.31 22 E5_Aa NovelBoundary 0 0.00 6.45 11.74 5.66 12.73 2.90 4.42 29.74 6.25 1.67 4.95 0.00 0.00 0.00 6.30 4.19 0.00 8.62 31.72 2.88 14.52 16.23 10.76 23 ER5a ExonRegion 0 20.43 11.51 27.69 10.40 17.97 4.88 15.72 32.76 14.32 6.16 0.66 0.82 1.44 0.84 1.71 1.79 0.66 13.66 42.10 16.04 40.02 67.03 30.07 24 ER5b ExonRegion 0 2.12 0.00 0.00 0.00 1.61 0.00 0.00 1.73 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.28 0.00 1.67 0.00 25 IG22_AR1 ActiveIntergenicRegion 0 0.78 0.00 4.05 0.00 0.99 0.00 2.26 2.86 1.59 0.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.70 2.00 0.79 7.97 2.57 7.24