Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC105339.4 Gene 0 1.11 4.71 9.37 7.56 3.13 6.04 4.93 6.89 9.27 12.11 0.28 0.00 0.09 0.12 0.24 0.35 0.71 25.41 12.47 10.05 3.05 0.55 2.45 2 499050 Transcript 0 0.99 2.52 6.45 4.02 1.18 4.40 1.86 4.27 4.46 5.07 0.10 0.00 0.03 0.09 0.09 0.13 0.27 10.16 7.20 3.79 5.39 1.34 1.70 3 ER1a ExonRegion 0 0.00 0.20 1.51 1.29 0.00 2.15 0.00 0.76 0.63 1.74 0.00 0.00 0.00 0.07 0.00 0.00 0.00 0.72 0.72 0.42 3.95 0.20 2.31 4 E1a_E2a KnownJunction 0 0.00 0.00 6.53 0.00 0.00 4.83 0.00 0.00 0.00 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 8.85 0.00 5.44 0.00 0.00 5 ER2a ExonRegion 0 0.16 0.93 3.72 2.38 0.00 1.89 0.00 2.23 2.51 1.12 0.00 0.00 0.00 0.40 0.00 0.00 0.00 0.00 3.15 0.00 5.90 1.67 3.43 6 E2a_E3a KnownJunction 0 3.26 3.35 7.57 1.23 0.00 2.61 0.00 5.34 1.79 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.95 0.00 17.05 5.63 0.00 7 ER3a ExonRegion 0 0.68 1.38 4.40 1.77 0.00 7.66 0.00 2.77 1.71 0.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.93 2.83 0.09 4.30 1.18 3.91 8 E3_Da NovelBoundary 0 0.00 0.00 1.51 8.56 0.00 7.89 0.00 0.00 7.81 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.14 3.00 11.80 0.00 3.93 9 E3a_E4a KnownJunction 0 0.00 0.00 0.00 3.93 0.00 0.00 0.00 2.46 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 Ix Intron 0 7.97 25.51 28.28 47.26 20.14 48.95 8.31 34.87 34.71 30.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67.47 28.66 25.40 3.15 1.35 5.34 11 Ix_SR1 SilentIntronRegion 0 7.98 25.55 28.33 47.34 20.17 49.03 8.32 34.93 34.77 30.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 67.59 28.71 25.44 3.15 1.35 5.34 12 Ix Intron 0 11.99 22.58 69.27 76.57 24.45 131.06 13.63 67.92 80.25 58.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 116.94 41.64 46.02 8.16 2.17 6.11 13 Ix_AR1 ActiveIntronRegion 0 12.05 22.68 69.58 76.91 24.56 131.65 13.69 68.23 80.61 58.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 117.48 41.83 46.23 8.19 2.18 6.14 14 Ix Intron 0 4.30 20.04 36.57 37.17 17.58 53.07 7.04 35.47 43.48 34.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 110.36 53.32 31.62 4.83 1.30 5.05 15 Ix_AR1 ActiveIntronRegion 0 4.20 17.45 37.26 36.40 15.93 55.84 7.10 34.19 45.06 38.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 111.15 48.08 32.30 4.86 1.41 3.76 16 Ix_SR1 SilentIntronRegion 0 4.52 24.11 36.10 38.86 20.25 49.85 7.06 37.84 41.83 29.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 110.88 61.75 31.09 4.86 1.17 7.01 17 Ix Intron 0 1.80 13.83 33.63 32.80 16.68 51.44 9.75 27.00 30.77 24.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 87.18 38.81 28.35 3.12 2.36 4.16 18 Ix_SR2 SilentIntronRegion 0 2.01 15.17 37.71 36.57 18.95 55.14 10.79 30.07 33.43 27.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 97.90 43.82 31.21 3.24 2.28 4.77 19 Ix Intron 0 2.82 12.96 33.30 33.43 12.30 72.32 8.24 33.61 35.74 37.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 89.86 33.53 29.02 4.90 0.31 6.97 20 Ix_AR1 ActiveIntronRegion 0 3.02 9.82 34.90 30.09 12.17 63.89 7.78 30.75 32.67 35.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 91.17 33.80 31.23 4.16 0.00 9.05 21 Ix_SR1 SilentIntronRegion 0 2.68 15.84 32.27 36.69 12.53 80.43 8.74 36.44 38.80 39.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 89.70 33.66 27.42 5.60 0.58 5.23 22 Ix Intron 0 3.60 22.94 37.38 40.25 16.43 68.05 9.98 47.34 52.43 47.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 124.74 47.03 38.18 3.07 0.91 3.45 23 Ix_AR1 ActiveIntronRegion 0 4.13 22.34 39.99 38.44 17.61 70.05 10.48 52.35 54.29 53.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 138.80 49.02 36.71 2.64 0.96 2.88 24 Ix_SR1 SilentIntronRegion 0 2.87 23.87 33.89 42.93 14.85 65.53 9.31 40.55 50.03 39.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 105.61 44.44 40.37 3.68 0.84 4.26 25 Ix Intron 0 2.24 24.28 24.67 19.41 10.51 19.09 23.64 18.96 17.07 26.89 0.00 0.37 0.00 0.03 0.05 0.00 0.00 45.09 35.06 18.85 0.34 1.45 0.76 26 Ix_AR2 ActiveIntronRegion 0 0.90 33.89 25.75 20.70 7.92 12.42 13.59 32.09 27.10 20.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60.66 21.38 26.22 0.00 0.00 0.00 27 Ix_SR1 SilentIntronRegion 0 2.90 22.62 15.36 14.69 13.68 18.34 24.63 10.88 10.88 18.36 0.00 0.00 0.00 0.07 0.00 0.00 0.00 15.32 22.49 13.68 0.00 1.25 0.32 28 Ix_AR4 ActiveIntronRegion 0 1.83 11.51 51.43 34.05 9.09 22.27 28.50 18.85 14.42 31.39 0.00 0.00 0.00 0.00 0.20 0.00 0.00 38.22 56.74 23.04 0.00 3.35 5.08 29 Ix_AR5 ActiveIntronRegion 0 2.62 37.35 56.63 46.34 11.13 59.98 49.44 27.56 26.88 44.79 0.00 0.00 0.00 0.00 2.06 0.00 0.00 66.13 83.91 24.75 1.97 5.43 1.55 30 Ix_AR6 ActiveIntronRegion 0 4.23 44.92 64.50 47.70 9.97 59.85 49.59 27.18 31.33 44.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 74.92 98.75 33.27 2.20 2.46 5.87 31 Ix_AR7 ActiveIntronRegion 0 2.11 22.31 34.18 22.62 7.14 22.34 28.03 24.90 21.69 49.24 0.00 1.66 0.00 0.00 0.00 0.00 0.00 96.98 64.40 21.53 1.30 2.41 1.06 32 Ix Intron 0 3.64 10.50 33.42 27.96 14.65 45.90 11.60 36.66 46.07 54.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 100.88 62.30 34.94 0.69 0.65 3.68 33 Ix_AR1 ActiveIntronRegion 0 3.66 10.56 33.63 28.12 14.74 46.18 11.67 36.89 46.35 54.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 101.50 62.68 35.15 0.69 0.66 3.70 34 E4_Aa NovelBoundary 0 454.75 592.07 616.80 436.31 351.87 394.60 442.25 349.21 230.03 531.38 794.57 195.36 91.39 808.29 779.53 654.53 663.58 691.57 415.92 746.04 454.74 378.12 254.38 35 ER4a ExonRegion 0 2.80 11.78 21.39 17.56 8.27 11.67 13.02 16.34 22.89 29.41 0.73 0.00 0.24 0.16 0.65 0.94 1.87 65.90 30.93 26.01 1.11 0.66 2.22