Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	AC103965.1	Gene	0	30.43	111.96	353.11	147.75	31.14	214.46	99.80	83.24	79.26	175.78	135.80	28.52	16.07	126.87	92.21	52.76	37.02	396.44	342.70	134.88	49.88	15.79	34.32
2	335068	Transcript	0	14.98	49.32	109.22	42.38	16.27	73.26	40.71	29.01	27.82	57.49	51.63	17.75	8.59	46.82	27.80	21.33	15.87	144.99	136.81	46.16	11.65	7.51	10.87
3	316967	Transcript	0	14.22	87.88	201.35	183.73	48.30	244.52	49.82	62.39	79.51	152.52	160.25	38.56	19.80	55.74	36.34	23.24	20.48	537.98	670.42	169.57	20.57	17.39	35.25
4	400817	Transcript	0	4.55	11.44	46.55	32.90	3.40	47.92	14.98	24.32	31.29	34.80	17.49	3.43	2.73	17.02	9.93	4.82	3.07	96.47	45.23	40.36	24.15	4.82	13.00
5	416834	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1b	ExonRegion	0	5.85	15.86	17.40	2.81	4.11	74.34	31.80	3.47	2.21	6.49	5.71	1.10	0.00	19.41	16.03	10.04	2.55	31.46	30.51	6.54	0.89	1.92	4.10
8	E1_Ac	KnownBoundary	0	6.15	5.92	50.32	10.42	3.40	15.73	1.72	29.16	13.95	42.33	41.33	0.00	6.82	32.26	34.61	7.01	25.34	25.54	40.47	17.83	8.40	0.00	14.68
9	ER1c	ExonRegion	0	5.61	18.15	62.35	17.78	3.76	37.05	15.12	8.45	10.14	36.09	58.33	2.42	4.77	59.93	49.30	20.63	25.01	112.71	94.02	29.03	9.69	5.26	8.88
10	E1a_E2a	KnownJunction	1	7.26	55.85	159.25	36.09	7.30	83.65	17.00	24.85	18.78	67.18	149.41	6.15	13.64	176.29	111.75	93.39	64.70	454.33	352.20	77.28	9.45	2.45	27.49
11	E1a_E3a	KnownJunction	0	3.33	8.95	50.89	27.34	7.98	22.83	11.48	13.06	7.75	32.48	4.16	0.00	6.17	26.19	13.23	15.64	0.00	40.33	53.55	16.75	2.72	8.33	7.77
12	I1_AR3	ActiveIntronRegion	0	9.47	23.81	25.97	60.39	21.83	64.71	25.37	72.28	53.10	25.20	5.05	7.27	9.42	1.50	1.68	3.38	2.77	26.35	27.62	34.16	19.82	2.74	4.24
13	I1_AR4	ActiveIntronRegion	0	4.44	24.27	21.50	49.75	26.65	55.26	30.56	56.13	39.94	25.78	2.34	9.70	9.85	1.34	2.88	3.00	6.60	17.85	14.17	25.75	7.19	3.41	3.59
14	I1_SR3	SilentIntronRegion	0	6.96	41.91	39.66	84.57	17.43	71.65	41.26	68.83	60.78	48.63	3.49	10.58	8.08	1.10	2.40	3.20	3.61	18.35	17.96	36.93	10.44	4.79	8.74
15	I1_AR5	ActiveIntronRegion	0	5.63	74.56	51.59	135.55	18.11	85.10	38.17	75.75	75.25	66.69	3.77	14.75	8.82	0.95	0.93	0.97	1.00	14.13	5.80	41.23	3.42	6.81	10.63
16	I1_SR4	SilentIntronRegion	0	13.75	61.28	53.89	121.79	21.34	134.70	49.41	72.16	54.50	42.88	2.91	12.76	7.31	1.45	2.85	1.86	3.09	32.41	20.52	44.98	15.88	9.64	13.75
17	I1	Intron	0	3.53	27.00	25.74	41.26	14.42	104.93	18.66	38.45	45.79	46.77	1.60	0.00	1.60	0.67	5.24	0.00	1.37	89.52	31.70	84.69	42.00	11.23	24.35
18	I1_SR1	SilentIntronRegion	0	3.56	27.22	25.95	41.59	14.54	105.79	18.82	38.75	46.15	47.15	1.62	0.00	1.61	0.68	5.28	0.00	1.38	90.25	31.93	85.39	42.34	11.32	24.55
19	E2_Aa	NovelBoundary	0	3.78	39.80	74.78	108.91	28.10	144.41	31.05	84.74	80.58	79.08	2.68	0.00	0.00	0.00	0.00	0.00	0.00	180.49	32.85	95.88	52.82	18.74	30.22
20	ER2a	ExonRegion	0	6.23	66.06	197.71	86.46	35.78	271.24	87.37	85.63	71.11	137.32	141.91	17.71	12.59	149.86	81.82	59.21	43.51	357.82	274.26	155.58	61.04	16.76	36.23
21	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER3a	ExonRegion	0	7.50	26.36	93.40	24.06	4.96	67.05	29.95	13.65	16.30	62.58	48.69	3.92	4.12	69.04	52.53	21.78	17.78	63.25	128.07	35.36	6.03	8.17	6.26
23	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E3a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER4a	ExonRegion	0	9.28	43.26	9.10	1.76	13.10	92.24	47.12	0.50	1.08	4.52	2.13	3.47	1.07	2.88	0.42	0.03	0.00	25.39	43.50	5.85	0.00	0.65	0.00
26	E4a_E5a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER5a	ExonRegion	0	8.21	55.24	39.36	27.47	6.73	42.44	23.03	7.71	10.17	34.76	16.14	2.71	3.20	23.43	18.30	3.07	0.80	100.41	128.11	27.33	3.85	4.97	6.62
28	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E5a_E6b	NovelJunction	0	0.00	43.94	128.47	62.73	8.49	86.48	34.67	51.26	35.62	64.52	19.11	24.31	0.00	14.66	4.45	15.30	4.39	112.21	184.19	31.32	0.00	11.82	0.00
30	ER6a	ExonRegion	0	13.78	64.63	107.79	89.54	14.22	116.61	48.22	48.61	51.87	96.24	68.24	7.57	3.30	28.84	16.40	10.01	9.58	242.79	161.51	74.91	35.05	9.17	15.44
31	E6_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	E6a_E6b	KnownJunction	0	14.22	87.88	201.35	183.73	48.30	244.52	49.82	62.39	79.51	152.52	160.25	38.56	19.80	55.74	36.34	23.24	20.48	537.98	670.42	169.57	20.57	17.39	35.25
33	E6a_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER6b	ExonRegion	0	9.10	20.32	93.10	65.80	6.81	95.84	29.96	48.64	62.58	69.61	34.97	6.86	5.46	34.04	19.85	9.63	6.13	192.95	90.46	80.71	48.30	9.63	26.00
35	E6_Ab	KnownBoundary	0	21.34	55.25	301.94	132.58	29.97	320.67	41.03	88.60	123.64	213.63	76.28	11.85	6.82	9.83	18.67	38.45	4.68	452.17	327.82	216.55	64.06	6.25	89.38
36	E6_Ac	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	ER6c	ExonRegion	0	42.49	179.11	780.66	424.70	59.28	583.99	150.83	246.64	312.39	539.13	314.32	95.58	68.91	251.61	145.29	112.03	73.64	1194.36	1171.72	402.78	128.66	37.66	113.17
38	ER6d	ExonRegion	0	31.42	89.23	573.57	279.51	20.92	238.23	96.56	176.55	177.41	391.93	194.08	28.13	24.68	173.29	104.61	84.24	60.33	552.80	544.86	217.95	90.09	26.69	54.62
39	E6b_E7a	KnownJunction	0	14.30	50.12	169.04	76.68	15.11	18.57	13.82	51.51	51.24	106.00	85.60	17.71	6.82	46.56	24.85	15.12	24.31	159.39	183.63	49.66	0.00	10.65	8.45
40	E6b_E7b	KnownJunction	0	23.12	43.28	393.66	188.49	19.35	143.72	58.87	75.33	63.08	230.58	99.34	11.55	6.82	43.20	13.35	56.65	29.64	155.99	210.64	49.41	28.85	2.57	25.44
41	E7_Aa	NovelBoundary	0	142.47	319.81	846.54	364.92	116.81	429.98	382.23	220.12	139.03	327.93	307.03	201.52	108.76	337.40	214.97	153.72	92.85	937.43	1228.27	411.56	89.52	42.86	67.86
42	ER7a	ExonRegion	0	92.92	292.22	644.74	233.26	93.93	450.64	253.26	167.04	162.46	316.95	321.11	120.81	54.66	298.94	183.90	139.83	102.64	934.84	813.84	297.00	90.46	40.46	70.72
43	E7_Ab	KnownBoundary	0	49.64	125.50	537.92	176.23	20.20	221.69	130.77	85.23	163.16	253.44	277.18	25.96	12.66	142.92	134.50	35.89	45.63	474.27	291.87	230.42	60.67	17.15	16.05
44	ER7b	ExonRegion	0	60.09	238.05	1003.35	375.53	61.61	504.06	252.95	221.71	197.00	536.08	347.23	81.68	40.48	350.73	224.39	182.32	110.69	1102.94	971.43	306.52	116.29	36.83	70.13
45	E7_Ac	KnownBoundary	1	73.86	265.81	632.09	267.47	82.26	593.75	249.25	154.56	140.68	341.68	346.46	50.42	6.82	270.00	183.70	89.81	70.78	561.78	564.25	267.75	95.01	16.84	56.17
46	ER7c	ExonRegion	0	63.73	194.75	467.66	193.50	36.13	378.31	203.58	86.11	78.56	219.85	135.93	36.08	12.43	150.66	111.51	69.06	51.66	405.80	373.78	129.06	48.85	18.82	35.47
47	E7_Da	KnownBoundary	0	91.35	142.08	354.16	174.40	29.12	275.52	159.03	89.71	83.04	166.84	37.80	12.00	5.84	107.72	110.88	54.86	8.88	611.52	335.54	104.82	8.22	10.16	56.60
48	E7a_E7d	KnownJunction	0	0.00	2.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER7d	ExonRegion	0	35.80	147.19	322.13	77.11	27.79	240.26	121.96	44.32	43.96	131.16	78.33	9.04	2.54	119.07	73.22	40.41	29.23	332.33	176.31	96.08	22.65	5.27	24.98
50	E7_Db	KnownBoundary	1	36.52	129.58	725.88	189.95	61.97	398.52	147.99	121.37	120.17	357.40	240.27	32.71	0.00	200.07	106.43	138.51	77.33	806.39	466.18	234.83	69.13	9.06	39.78
51	ER7e	ExonRegion	0	34.23	128.24	569.65	211.75	38.32	226.16	95.69	100.66	79.85	240.82	214.75	25.84	18.82	180.05	154.48	68.70	43.12	520.05	472.57	175.75	57.69	16.76	43.96
52	E7_Ad	KnownBoundary	0	61.05	397.23	1594.77	800.43	79.46	415.22	207.70	277.70	178.24	525.63	369.88	119.74	40.26	380.84	403.98	126.89	95.65	914.96	1083.42	367.14	45.10	32.03	69.31
53	ER7f	ExonRegion	0	67.52	377.94	904.25	433.18	105.54	503.70	268.89	179.95	134.27	344.03	308.49	72.82	41.81	257.59	241.62	105.26	93.18	659.39	865.16	236.76	51.90	26.93	49.20
54	ER7g	ExonRegion	0	4.23	14.24	8.58	5.45	0.00	11.00	10.59	5.19	0.00	4.59	3.87	0.00	0.00	14.62	8.70	0.00	6.60	11.09	28.67	2.13	0.00	0.00	2.94
55	IG32_SR21	SilentIntergenicRegion	0	1.02	0.86	7.27	10.27	1.41	11.85	2.35	6.40	9.30	5.77	0.51	0.00	0.00	0.00	0.00	0.16	0.00	23.63	5.73	6.07	8.37	0.55	4.29
56	IG32_AR23	ActiveIntergenicRegion	0	1.73	4.35	12.86	12.34	1.87	21.82	3.18	14.41	17.37	13.00	0.93	1.16	0.17	0.18	0.19	0.13	0.00	46.95	9.86	22.41	15.02	1.73	6.95
57	IG32_AR22	ActiveIntergenicRegion	0	2.56	7.37	27.69	25.47	3.18	35.64	7.20	24.82	32.55	22.13	2.07	1.23	0.00	0.10	0.00	0.79	0.00	73.96	14.92	33.96	26.58	3.37	14.40
58	IG32_AR20	ActiveIntergenicRegion	0	1.28	9.02	16.59	14.35	3.78	16.28	8.01	15.06	10.36	10.31	0.39	0.87	0.00	0.00	0.41	0.00	0.00	7.97	2.57	4.77	1.29	2.94	0.59