Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HEXA Gene 0 128.95 47.89 102.54 109.67 93.66 138.73 76.10 123.16 125.35 110.95 172.75 82.43 79.70 174.29 263.18 196.23 126.90 149.29 155.42 62.17 447.87 197.06 223.35 2 268097 Transcript 0 2.38 1.02 0.00 0.91 5.80 8.72 3.98 0.80 0.41 0.05 0.98 0.00 0.00 1.90 3.56 2.97 0.28 2.16 2.65 1.06 1.43 0.70 1.73 3 429918 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 423001 Transcript 0 0.00 0.00 1.39 0.00 0.00 0.00 0.00 0.00 1.39 1.13 4.63 0.00 0.00 14.83 0.00 10.60 0.00 18.99 17.60 0.00 0.00 0.00 0.00 5 457859 Transcript 0 1.90 0.81 2.97 2.61 1.65 3.99 3.12 3.53 4.05 4.79 3.24 1.97 3.24 6.07 11.45 8.26 6.99 7.58 3.93 5.38 16.10 4.57 13.69 6 ER1a ExonRegion 0 1.23 0.00 0.00 0.00 0.00 0.94 0.46 0.44 0.00 0.09 0.66 0.00 0.00 0.55 0.35 0.00 0.56 0.00 0.00 0.00 0.65 0.71 1.51 7 E1_Ab KnownBoundary 0 7.04 0.00 0.00 0.00 0.00 5.51 2.25 0.00 0.00 1.45 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 0.00 0.00 5.62 0.00 4.01 8 ER1b ExonRegion 1 78.39 18.85 47.30 42.55 31.52 73.49 33.73 48.35 58.59 63.23 120.76 16.18 25.00 93.43 194.34 145.54 86.58 88.40 98.42 44.60 335.72 118.98 177.32 9 E1a_E2a KnownJunction 0 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.07 0.00 0.00 0.00 0.00 0.00 5.50 0.00 0.00 10 E1a_E2b KnownJunction 0 81.57 24.80 126.46 159.52 46.26 115.56 60.15 141.09 183.56 138.18 222.16 110.44 118.99 269.23 495.95 355.12 125.01 347.17 132.99 100.29 602.14 181.31 475.39 11 Ix_AR2 ActiveIntronRegion 0 7.89 2.82 10.98 11.60 27.18 8.41 33.42 5.26 4.25 3.19 3.23 2.72 6.30 4.29 14.05 12.36 6.88 7.87 10.65 10.79 0.94 1.52 1.80 12 ER2a ExonRegion 0 3.80 1.61 4.79 5.21 3.31 7.98 6.23 7.07 8.10 9.58 6.48 3.95 6.48 12.13 17.83 16.52 13.98 15.16 7.87 10.76 26.70 9.13 27.38 13 E2_Ab KnownBoundary 0 3.78 3.09 5.26 4.13 4.07 7.84 6.23 8.30 5.18 9.62 2.21 5.40 6.82 7.42 9.27 15.89 16.83 12.68 12.14 12.78 21.44 7.78 27.57 14 ER2b ExonRegion 0 110.38 52.72 188.37 179.95 159.41 297.16 132.08 184.63 238.78 181.02 303.78 125.04 155.64 294.60 387.06 324.61 214.56 291.70 274.63 111.77 789.29 351.39 365.39 15 E2a_E3a KnownJunction 0 106.61 63.61 251.00 178.63 310.27 531.80 292.80 202.58 230.50 236.60 381.31 149.15 154.54 376.19 546.51 329.91 271.53 237.03 377.05 97.47 804.09 441.68 377.56 16 ER3a ExonRegion 0 150.82 78.26 189.78 121.57 192.01 342.25 174.36 202.73 240.74 205.70 410.80 134.28 162.02 301.47 447.36 290.37 279.13 205.07 238.56 96.71 938.85 301.35 290.06 17 E3a_E4a KnownJunction 0 240.12 66.37 119.42 76.98 112.90 236.68 86.78 187.71 222.02 173.58 348.46 134.44 103.73 245.57 393.10 283.52 292.19 140.24 151.44 90.57 994.62 264.59 228.94 18 E3a_E5a NovelJunction 0 34.30 6.71 29.27 34.13 14.43 0.00 9.98 20.45 23.93 28.21 18.53 0.00 12.82 12.18 24.11 19.82 9.07 37.52 87.63 8.37 14.21 24.55 43.19 19 E3a_E6a KnownJunction 0 10.82 9.54 12.92 8.92 0.00 15.79 0.00 4.44 29.89 10.96 9.58 12.30 0.00 7.06 32.14 4.02 8.42 23.17 4.80 8.44 11.55 0.00 0.00 20 ER4a ExonRegion 0 209.04 72.00 137.42 128.46 113.35 188.88 72.28 197.08 269.07 189.17 334.23 167.01 213.45 358.20 491.79 369.62 259.09 218.55 188.28 104.93 879.47 374.24 335.15 21 E4a_E5a KnownJunction 0 292.42 87.42 150.79 184.16 124.28 198.75 78.12 210.79 281.19 196.25 301.76 209.47 255.67 377.95 432.66 529.35 282.19 245.53 280.95 132.50 802.49 514.73 512.61 22 ER5a ExonRegion 0 247.37 76.56 194.57 234.99 152.13 190.15 88.13 243.76 257.88 242.48 370.25 207.50 258.92 381.21 571.26 498.78 306.60 329.12 437.74 110.93 973.58 454.88 518.22 23 E5a_E6a KnownJunction 0 172.25 51.50 218.12 201.97 168.76 235.77 154.30 234.70 276.30 261.31 371.15 236.93 237.65 348.99 571.48 430.31 259.37 264.02 328.95 100.80 961.26 292.57 411.02 24 ER6a ExonRegion 0 181.98 69.98 154.48 166.14 154.38 221.87 138.46 213.36 248.55 216.19 254.46 192.49 180.15 329.04 405.95 386.87 195.08 325.44 274.28 91.26 699.94 352.87 368.72 25 E6a_E7a KnownJunction 0 414.30 112.74 241.15 312.75 290.49 374.50 256.36 302.39 307.81 275.42 452.06 236.48 297.06 522.05 791.65 656.15 355.12 482.52 718.70 155.00 1079.99 542.90 677.70 26 ER7a ExonRegion 0 186.27 72.98 175.26 181.28 142.96 251.97 143.21 190.70 215.27 195.57 279.66 208.76 210.03 349.04 467.45 402.73 201.28 319.73 288.22 110.83 719.87 321.85 428.93 27 E7a_E8a KnownJunction 0 246.49 83.01 170.22 129.02 172.33 284.78 163.89 169.10 210.65 168.69 230.06 211.42 189.60 288.19 381.98 276.00 230.11 206.89 137.51 103.03 681.22 231.52 303.21 28 E7a_E9a KnownJunction 0 0.00 0.00 1.39 0.00 0.00 0.00 0.00 0.00 1.39 1.13 4.63 0.00 0.00 14.83 0.00 10.60 0.00 18.99 17.60 0.00 0.00 0.00 0.00 29 ER8a ExonRegion 0 281.63 109.77 201.54 198.51 272.20 349.08 182.37 250.35 239.79 209.24 359.27 201.98 154.72 406.64 476.03 355.33 250.69 261.37 291.91 124.65 756.15 368.91 418.53 30 E8a_E9a KnownJunction 0 394.74 127.35 219.15 220.42 380.56 317.49 259.81 248.42 279.54 225.80 385.10 150.05 180.99 383.49 414.61 331.71 286.49 224.55 217.04 120.48 814.66 274.08 294.25 31 ER9a ExonRegion 0 241.65 78.58 167.40 202.10 210.43 230.05 169.71 257.26 226.40 211.50 358.83 168.80 133.59 344.82 424.35 456.99 253.33 261.15 291.37 108.17 689.99 449.51 486.67 32 E9a_E10a KnownJunction 0 292.13 72.49 164.51 183.83 201.10 258.32 146.93 279.63 238.31 207.19 332.51 85.23 119.15 387.08 478.52 470.30 229.27 263.73 381.09 115.24 679.92 516.93 459.08 33 E9a_E11a NovelJunction 0 16.15 5.66 19.40 11.82 22.92 4.66 12.59 12.65 8.42 5.91 0.00 6.15 0.00 7.06 9.89 0.00 0.00 27.94 4.24 5.94 11.24 6.25 8.37 34 E9a_E12a NovelJunction 0 3.63 2.96 23.59 27.67 15.11 19.76 12.67 17.33 17.22 16.71 0.00 0.00 0.00 0.00 13.72 0.00 0.00 2.28 30.02 22.63 8.77 5.88 7.51 35 ER10a ExonRegion 0 269.93 78.81 140.08 147.43 207.61 233.97 124.00 213.67 184.83 145.01 330.13 153.61 157.34 360.78 487.41 293.91 254.21 157.34 248.50 75.84 799.13 370.32 377.86 36 E10a_E11a KnownJunction 0 437.11 102.22 157.74 170.57 300.76 287.16 186.76 217.04 165.77 134.55 356.77 185.01 244.14 385.84 659.25 348.71 304.53 110.02 297.61 56.50 806.01 369.61 440.13 37 E10a_E12a NovelJunction 0 13.71 9.01 13.75 7.33 27.84 9.94 1.90 21.03 26.19 29.44 0.00 0.00 0.00 9.12 19.90 4.36 0.00 20.60 14.02 11.31 9.39 0.00 8.45 38 Ix_SR1 SilentIntronRegion 0 7.13 9.14 13.85 17.44 7.94 13.73 13.62 11.13 10.17 9.23 4.17 5.60 5.28 8.16 14.02 13.76 16.38 33.52 12.33 9.21 11.96 5.59 17.80 39 E11_Aa NovelBoundary 0 61.12 2.96 31.81 25.34 7.89 16.75 21.86 36.56 14.06 10.37 9.21 12.60 28.89 24.60 43.27 26.40 7.95 11.61 29.84 17.96 5.00 2.33 18.27 40 ER11a ExonRegion 0 194.25 67.16 163.66 141.30 130.25 189.64 124.86 192.31 169.51 143.65 226.43 136.43 114.57 214.74 299.49 285.78 166.18 191.40 196.54 61.86 585.18 311.35 312.37 41 E11a_E12a KnownJunction 0 291.38 63.15 237.16 228.51 171.31 208.91 115.22 254.29 210.44 180.89 217.90 259.58 146.74 319.27 476.42 428.43 258.06 247.68 243.49 105.02 764.12 430.10 392.24 42 ER12a ExonRegion 0 213.79 55.51 165.59 142.83 89.24 147.37 99.88 195.32 156.29 150.33 152.87 90.78 77.51 165.00 304.95 183.06 128.08 141.59 137.57 62.80 525.94 226.71 219.54 43 E12_Da NovelBoundary 0 80.76 17.83 22.53 45.35 38.71 80.92 34.98 56.11 24.02 46.61 56.70 36.76 18.67 78.76 68.11 91.43 61.34 94.31 61.55 25.50 47.57 14.33 42.51 44 E12a_E13a KnownJunction 0 201.81 51.37 210.28 161.45 110.27 198.47 125.51 220.90 201.50 176.59 162.57 121.09 60.06 182.53 375.55 127.66 156.99 141.89 110.78 104.76 751.15 207.09 195.14 45 E13_Aa NovelBoundary 0 61.34 18.55 30.54 45.52 42.78 42.08 41.56 54.51 47.48 36.64 54.49 5.70 12.99 57.63 89.99 62.80 72.84 69.02 27.86 21.03 31.32 27.07 36.45 46 ER13a ExonRegion 0 166.78 41.85 150.48 153.46 72.73 118.92 72.11 181.55 153.77 141.82 186.81 50.96 43.19 149.31 323.84 141.19 131.53 137.63 75.69 72.62 639.43 156.42 184.31 47 E13_Da NovelBoundary 0 28.89 30.92 51.62 65.63 23.51 35.77 39.13 26.86 44.42 37.39 20.11 6.30 0.00 9.77 24.11 41.27 17.86 35.82 23.15 45.83 17.05 9.31 19.72 48 E13a_E14a KnownJunction 0 425.78 102.68 179.12 197.81 157.64 198.41 104.53 195.18 135.07 128.72 230.90 117.49 94.15 231.74 277.27 383.15 161.38 181.28 148.52 68.84 785.81 262.88 392.84 49 Ix Intron 0 35.33 41.30 34.98 74.99 36.84 34.56 31.88 27.14 34.26 30.76 13.38 17.00 16.79 17.70 16.59 29.95 20.31 61.48 62.48 42.07 20.33 13.14 34.79 50 Ix_SR2 SilentIntronRegion 0 40.62 46.16 40.85 87.35 41.42 39.56 35.14 31.45 39.61 35.60 15.40 16.95 19.09 19.59 18.26 33.21 22.79 71.54 71.09 46.56 22.92 14.38 38.81 51 Ix_AR1 ActiveIntronRegion 0 18.14 39.51 7.35 19.08 38.61 26.20 40.48 8.64 12.35 11.47 11.60 36.49 9.38 17.63 21.55 28.87 22.16 17.16 46.42 42.55 24.24 16.37 29.79 52 Ix_SR1 SilentIntronRegion 0 12.21 27.11 6.28 15.73 20.90 12.84 25.16 7.35 10.19 8.63 3.83 20.66 4.10 6.94 9.07 22.60 11.90 13.51 28.34 32.45 10.42 11.63 24.04 53 E14_Aa NovelBoundary 0 129.80 130.70 54.52 104.55 98.56 58.09 51.71 33.85 37.24 35.91 15.53 0.00 12.99 35.32 36.10 21.19 40.49 99.99 64.47 32.09 40.40 10.78 32.18 54 ER14a ExonRegion 0 78.92 43.94 60.99 95.08 54.04 75.05 40.46 69.97 69.32 59.65 74.02 29.75 21.58 75.35 153.87 73.57 54.08 93.00 95.66 44.28 222.11 91.44 103.32 55 ER14b ExonRegion 0 3.53 2.03 0.00 1.82 11.59 16.50 7.50 1.15 0.82 0.00 1.29 0.00 0.00 3.25 6.77 5.94 0.00 4.31 5.31 2.13 2.20 0.69 1.96