Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ST20 Gene 0 0.67 0.16 0.15 0.80 0.00 0.51 0.00 0.20 0.29 0.47 0.00 0.42 1.25 0.30 0.92 0.00 0.00 0.00 0.25 0.00 0.00 0.00 0.12 2 322484 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 417278 Transcript 0 0.24 0.00 0.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 Ix Intron 0 18.27 26.57 26.89 41.55 24.79 36.56 27.20 21.80 31.71 23.93 26.27 24.17 23.52 64.18 33.43 32.45 40.86 62.12 32.36 41.39 25.23 13.41 28.29 7 Ix_AR1 ActiveIntronRegion 0 6.40 7.26 12.70 17.77 7.60 15.82 8.86 8.34 15.83 16.86 21.06 4.20 10.64 53.83 26.70 19.13 29.79 58.08 18.62 24.77 27.43 8.15 23.16 8 Ix_SR1 SilentIntronRegion 0 30.59 46.61 41.63 66.24 42.63 58.10 46.24 35.77 48.21 31.29 31.70 44.90 36.90 74.99 40.46 46.30 52.39 66.40 46.64 58.67 23.00 18.88 33.64 9 Ix Intron 0 16.30 11.70 14.18 11.95 15.74 24.32 17.85 10.37 16.59 14.75 9.45 19.08 28.80 30.70 16.99 15.29 29.11 23.30 13.13 22.84 21.55 8.06 15.39 10 Ix_SR1 SilentIntronRegion 0 9.70 10.24 11.29 11.07 6.99 14.86 11.82 8.14 13.48 11.82 7.26 11.60 11.25 28.52 11.81 13.88 21.01 23.24 13.12 20.16 25.83 5.06 13.98 11 Ix_AR1 ActiveIntronRegion 0 31.58 15.06 20.87 13.97 35.96 46.19 31.80 15.53 23.76 21.52 14.52 36.35 69.38 35.74 28.95 18.55 47.85 23.44 13.14 29.04 11.65 14.99 18.64 12 ER2a ExonRegion 0 0.48 0.00 0.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 Ix Intron 0 13.76 24.67 12.25 22.57 30.65 20.07 21.75 19.58 15.74 19.54 9.86 20.57 34.54 12.82 14.08 10.95 17.40 21.35 12.41 20.41 7.51 8.73 10.26 15 Ix_SR3 SilentIntronRegion 0 9.04 7.15 3.05 4.86 4.12 5.85 5.83 5.14 3.51 4.65 9.40 20.48 14.45 3.64 8.47 3.61 17.31 2.90 3.36 7.25 1.07 5.12 6.98 16 Ix_AR10 ActiveIntronRegion 0 5.53 20.32 7.73 20.91 20.61 8.99 15.24 15.91 10.34 13.95 15.80 22.25 36.09 11.36 13.02 9.20 21.26 8.25 8.53 23.68 3.20 5.23 8.86 17 Ix_SR2 SilentIntronRegion 0 5.76 17.01 5.34 13.75 20.68 13.24 18.79 11.56 10.35 12.87 8.02 21.11 28.49 11.35 7.99 9.35 14.35 16.94 11.04 19.27 5.86 7.51 6.78 18 Ix_AR9 ActiveIntronRegion 0 11.06 18.16 9.39 26.91 27.27 20.63 17.16 18.29 19.48 21.62 6.67 28.41 35.31 13.35 12.13 7.40 12.44 13.99 10.42 18.15 2.43 8.57 6.79 19 Ix_AR8 ActiveIntronRegion 0 9.21 17.49 20.46 43.34 26.09 41.72 12.11 37.68 20.69 22.14 3.67 41.13 73.87 17.70 15.38 10.70 5.45 10.81 3.50 22.55 3.31 16.98 9.25 20 Ix_AR7 ActiveIntronRegion 0 10.58 16.27 22.06 45.66 23.64 45.84 17.43 30.25 20.17 26.19 3.87 51.95 78.95 21.11 18.86 10.90 4.95 8.31 3.19 20.92 2.20 14.93 6.36 21 Ix_AR6 ActiveIntronRegion 0 8.47 19.73 23.16 38.43 28.63 40.53 15.89 29.04 21.61 25.23 1.93 44.59 76.92 15.59 22.34 13.67 6.60 6.84 3.19 21.70 2.86 13.33 5.87 22 Ix_AR5 ActiveIntronRegion 0 7.20 25.62 19.85 38.71 25.42 27.32 19.99 32.15 27.17 28.33 10.82 37.23 81.61 13.16 22.92 9.21 9.24 7.39 2.23 20.64 3.97 18.13 5.87 23 Ix_AR4 ActiveIntronRegion 0 12.28 25.83 19.73 29.44 38.53 19.07 32.30 33.19 24.21 33.72 13.53 21.65 61.44 9.42 23.50 10.40 19.81 8.87 0.00 20.43 6.61 14.38 2.94 24 Ix_AR3 ActiveIntronRegion 0 21.17 29.15 16.34 27.03 40.14 20.78 40.60 31.40 24.29 39.38 13.53 12.99 53.94 9.74 21.76 7.93 17.05 11.09 0.00 23.05 8.08 12.50 5.87 25 Ix_AR2 ActiveIntronRegion 0 25.40 31.38 9.80 23.17 39.37 17.55 45.20 24.45 22.23 36.21 17.95 4.33 54.27 7.42 29.84 7.22 19.33 14.78 0.00 19.76 6.61 6.55 5.87 26 Ix_SR1 SilentIntronRegion 0 7.97 16.37 4.01 8.09 18.07 7.10 15.54 7.88 6.10 15.79 3.92 8.60 26.19 4.43 8.74 11.00 7.46 6.74 4.22 9.64 1.63 3.25 3.24 27 Ix_AR1 ActiveIntronRegion 0 33.66 45.71 27.74 33.56 57.06 37.15 35.06 34.57 24.69 30.68 12.20 12.38 37.87 17.00 24.55 17.69 25.52 46.76 21.79 23.82 18.21 12.77 20.61 28 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.77 0.00 0.00 0.00 0.00 0.00 3.25 0.00 0.00 5.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 Ix Intron 0 7.13 15.19 9.22 19.27 21.53 12.41 17.06 14.27 12.88 15.90 3.80 10.03 20.15 6.52 7.38 7.52 8.96 17.29 9.31 13.12 4.30 5.17 5.01 31 Ix_SR3 SilentIntronRegion 0 2.72 6.98 3.14 7.75 16.76 5.98 9.48 8.40 6.63 6.82 3.40 6.49 10.61 6.68 4.97 6.88 10.48 15.45 9.70 9.58 5.48 2.86 5.54 32 Ix_SR2 SilentIntronRegion 0 4.26 14.75 7.42 17.47 19.99 10.99 17.17 15.26 15.56 19.95 4.13 11.83 24.99 6.51 4.67 7.27 10.95 18.63 10.51 15.83 3.97 6.73 4.73 33 Ix_AR3 ActiveIntronRegion 0 4.23 11.77 3.06 13.14 25.04 14.15 8.04 8.64 3.71 10.49 1.93 4.33 13.74 4.76 10.78 2.34 0.00 6.34 3.19 9.73 0.00 2.08 0.00 34 Ix_AR2 ActiveIntronRegion 0 10.43 15.40 9.09 31.16 32.12 23.54 25.75 17.50 12.19 17.63 1.80 13.94 22.77 4.36 8.41 6.22 1.55 6.09 2.68 9.28 2.61 6.02 2.17 35 Ix_SR1 SilentIntronRegion 0 16.58 26.73 20.09 31.95 26.24 18.44 23.75 19.11 17.31 20.37 4.87 10.18 23.09 7.69 13.90 9.67 7.21 23.27 9.95 15.15 4.41 5.31 6.03 36 Ix_AR1 ActiveIntronRegion 0 5.50 14.60 16.84 25.27 10.81 10.42 4.37 10.47 5.31 10.09 0.19 4.68 20.92 0.00 22.57 3.63 4.82 4.55 6.75 7.23 0.00 2.50 7.87 37 ER4a ExonRegion 0 1.91 0.73 0.00 3.66 0.00 1.96 0.00 0.93 1.33 2.16 0.00 1.29 5.72 1.38 3.08 0.00 0.00 0.00 1.15 0.00 0.00 0.00 0.53