Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AP3S2 Gene 0 31.21 67.30 59.92 63.27 50.19 84.96 42.42 67.43 104.71 75.51 47.78 39.05 31.04 62.72 74.64 53.19 44.81 134.93 104.07 70.89 79.94 44.88 36.86 2 336418 Transcript 0 38.31 143.96 87.72 93.05 69.61 128.54 74.62 101.30 151.58 136.13 96.90 91.98 31.75 100.62 85.97 79.45 78.74 199.07 107.37 89.53 107.27 62.09 46.76 3 423566 Transcript 0 4.27 3.05 9.38 8.06 21.56 13.43 25.88 7.44 4.51 12.63 13.01 3.97 22.39 5.69 6.06 15.02 12.97 8.26 19.66 6.34 13.58 3.25 15.33 4 ER1a ExonRegion 0 0.24 1.16 0.02 0.14 0.26 1.26 0.60 0.35 0.65 0.21 0.97 0.00 0.76 0.90 1.38 1.04 1.16 1.41 1.41 0.97 1.64 0.36 0.48 5 E1_Ab KnownBoundary 0 8.96 14.08 7.18 8.49 8.57 37.08 21.77 8.50 21.06 5.91 24.80 0.00 26.62 16.78 49.94 23.75 23.09 34.12 42.17 31.26 43.31 11.76 24.24 6 ER1b ExonRegion 1 59.76 141.37 48.87 47.70 54.37 188.15 111.57 81.64 125.55 80.49 110.66 18.29 21.06 112.46 133.36 165.72 132.80 100.94 175.55 109.61 159.64 95.36 80.10 7 E1a_E2a KnownJunction 1 18.45 16.18 22.74 15.15 7.56 11.07 10.16 43.37 52.23 35.94 23.53 38.86 80.51 17.01 31.52 11.62 16.92 30.55 8.85 16.94 54.12 10.96 3.33 8 Ix Intron 0 8.14 7.68 9.65 13.72 9.57 6.75 16.43 8.70 6.34 10.12 1.03 8.98 9.74 2.72 4.56 6.16 6.84 6.37 5.22 7.61 1.47 3.90 7.07 9 Ix_SR2 SilentIntronRegion 0 7.24 5.34 8.26 7.31 9.31 8.94 19.74 7.05 4.52 5.80 1.26 6.16 9.34 4.14 6.82 6.76 5.62 4.65 6.49 5.30 1.38 3.04 6.67 10 Ix_AR4 ActiveIntronRegion 0 14.91 7.97 14.94 29.84 12.66 8.68 27.54 19.97 8.61 22.71 3.62 21.07 14.13 2.75 5.91 11.09 9.72 10.47 10.32 15.34 2.32 7.11 10.88 11 Ix_AR3 ActiveIntronRegion 0 7.46 7.10 6.91 9.65 8.37 6.05 12.94 7.23 4.19 7.37 1.18 16.42 13.25 0.79 5.66 4.46 4.39 7.00 5.10 9.33 1.04 2.70 6.08 12 Ix_AR1 ActiveIntronRegion 0 9.49 11.95 15.31 21.64 13.71 6.51 17.09 11.60 10.93 14.31 0.00 5.47 14.29 3.17 3.11 6.38 9.93 6.53 3.07 7.98 1.16 6.41 8.42 13 ER2a ExonRegion 1 25.10 40.43 38.15 36.83 11.92 36.54 23.67 70.42 96.12 76.66 134.15 25.69 22.79 69.80 64.99 56.34 145.10 66.58 85.42 73.75 180.44 44.61 25.06 14 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER3a ExonRegion 1 25.10 114.19 84.69 102.34 44.79 108.75 53.21 110.34 173.47 122.90 75.18 79.05 38.15 143.15 171.51 180.85 58.62 173.89 197.24 122.25 66.70 96.98 92.98 16 E3a_E4a KnownJunction 0 0.00 0.00 8.10 10.29 25.55 13.57 24.07 7.64 4.80 11.68 13.00 0.00 20.45 4.77 0.00 10.34 12.06 4.97 21.08 0.00 16.62 3.00 11.87 17 E3a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 Ix_AR1 ActiveIntronRegion 0 1.18 10.73 2.21 12.49 4.01 2.29 10.33 1.20 1.85 0.83 1.34 9.74 15.37 1.62 3.30 4.46 4.95 2.46 1.42 6.56 0.00 1.22 0.00 19 E4_Aa NovelBoundary 0 20.23 3.03 4.82 18.08 14.69 0.00 12.81 8.50 5.50 10.53 0.00 0.00 0.00 0.00 0.00 19.48 8.60 8.87 21.65 3.07 5.44 0.00 0.00 20 ER4a ExonRegion 0 8.55 6.10 10.66 5.84 17.58 13.29 27.70 7.24 4.21 13.58 13.02 7.94 24.32 6.61 12.12 19.70 13.88 11.54 18.24 12.68 10.54 3.49 18.80 21 E4_Da NovelBoundary 1 19.48 12.56 6.68 30.37 8.32 5.00 33.61 15.16 14.73 16.20 5.16 50.27 40.26 14.54 31.40 23.58 42.54 22.76 33.98 0.00 19.58 6.06 24.16 22 Ix Intron 0 13.80 6.77 5.31 10.10 7.52 2.42 11.65 7.10 4.75 5.13 2.40 8.97 9.01 2.05 6.45 8.47 9.16 13.54 9.75 11.27 3.92 2.55 8.54 23 Ix_SR3 SilentIntronRegion 0 18.60 9.18 6.07 13.59 10.01 2.86 13.78 10.30 6.38 7.39 3.82 11.64 10.32 2.78 8.07 11.67 11.37 15.57 14.99 15.48 5.28 3.51 12.23 24 Ix_AR2 ActiveIntronRegion 0 18.35 11.18 9.82 9.95 13.23 3.56 19.36 9.09 5.03 6.11 1.70 11.58 10.48 4.10 7.50 10.54 16.11 20.78 11.81 10.56 5.13 1.55 7.89 25 ER5a ExonRegion 1 34.72 215.56 104.04 95.97 108.44 304.97 182.89 137.51 187.99 174.79 117.85 91.82 14.07 96.50 87.04 77.61 84.45 187.16 122.59 98.26 107.09 60.28 46.05 26 E5_Da NovelBoundary 1 2.96 8.22 1.60 12.12 0.00 2.50 9.80 6.70 11.08 13.70 2.32 18.31 28.08 0.00 4.45 11.88 0.00 0.00 4.14 17.90 2.53 5.39 3.76 27 E5a_E6a KnownJunction 1 64.16 342.04 117.83 164.58 106.37 182.00 129.40 159.24 248.00 211.81 160.25 196.26 32.79 176.00 137.46 109.20 125.39 277.70 150.03 145.35 146.17 115.98 60.61 28 I5 Intron 0 10.62 7.42 6.07 12.79 9.65 5.45 13.53 9.81 7.83 7.44 2.66 11.24 11.92 2.52 5.18 10.89 8.78 13.68 8.82 11.40 4.39 2.92 9.31 29 I5_AR2 ActiveIntronRegion 0 10.90 2.03 1.41 10.78 4.46 9.89 14.32 10.32 7.07 13.38 2.40 4.85 9.38 1.53 0.70 12.34 17.30 12.60 8.30 15.28 1.40 3.47 6.67 30 I5_SR2 SilentIntronRegion 0 5.83 3.34 2.46 6.69 5.71 3.29 11.60 5.44 4.48 3.55 1.78 5.35 7.70 1.36 4.13 8.35 11.76 13.22 9.78 9.20 4.99 0.97 11.29 31 I5_SR3 SilentIntronRegion 0 11.38 5.20 3.10 13.34 10.42 7.09 16.47 11.97 9.61 8.84 2.23 19.83 21.36 2.01 3.74 12.51 13.12 9.16 9.40 14.23 3.28 4.00 10.84 32 I5_AR4 ActiveIntronRegion 0 11.76 9.81 9.14 12.07 7.05 6.64 20.74 17.34 15.08 14.72 4.56 24.35 20.09 3.67 8.84 21.04 18.45 23.62 16.94 22.94 6.16 3.35 13.70 33 I5_SR4 SilentIntronRegion 0 10.18 8.43 7.38 14.35 11.25 6.62 17.58 11.34 9.53 11.83 3.29 18.78 21.78 2.80 4.98 11.32 11.10 20.07 16.10 14.43 5.83 2.68 14.13 34 I5_AR5 ActiveIntronRegion 0 11.88 10.31 6.09 11.97 8.27 6.26 15.63 15.12 13.30 7.31 3.19 9.62 8.02 2.55 3.49 14.44 7.50 14.40 9.13 14.59 3.03 3.24 9.30 35 I5_SR5 SilentIntronRegion 0 12.41 9.33 7.27 15.15 10.42 5.78 12.60 10.07 7.84 6.64 2.02 7.26 7.97 2.48 6.59 9.34 6.26 11.67 6.00 8.21 3.70 2.36 7.12 36 I5_AR8 ActiveIntronRegion 0 4.18 5.21 4.20 6.52 7.92 2.41 8.19 15.94 5.94 3.88 2.39 17.54 8.87 2.29 5.28 10.76 2.17 12.10 3.14 2.80 0.00 0.69 12.56 37 I5_SR7 SilentIntronRegion 0 15.54 10.19 7.08 16.56 11.95 4.46 14.86 9.50 9.27 8.30 3.71 15.31 11.95 1.96 6.16 8.62 10.31 12.06 9.45 12.26 3.26 3.37 5.93 38 I5_AR9 ActiveIntronRegion 0 22.44 8.47 8.37 19.60 16.12 5.09 19.26 14.46 11.19 14.75 6.39 20.22 22.05 4.31 5.80 17.34 9.59 29.00 10.49 20.85 6.11 6.17 12.35 39 I5_AR10 ActiveIntronRegion 0 16.13 12.18 11.29 20.06 17.36 8.26 13.72 16.83 8.19 10.43 2.63 7.62 14.34 3.28 4.11 11.94 7.55 14.27 7.07 13.27 6.12 4.89 7.49 40 I5_AR11 ActiveIntronRegion 0 10.71 3.56 2.13 6.72 11.46 1.78 10.31 3.51 4.30 4.32 0.38 4.86 10.58 1.54 2.79 7.52 6.43 4.84 6.20 9.52 3.43 2.84 6.86 41 I5_SR10 SilentIntronRegion 0 6.89 2.21 4.73 8.20 5.32 5.75 7.82 5.12 5.99 5.56 3.03 11.30 8.30 3.70 1.78 10.39 6.96 17.05 7.30 12.18 8.23 5.15 11.33 42 ER6a ExonRegion 0 90.07 214.05 151.38 177.11 116.69 161.07 91.59 163.82 252.59 242.66 173.10 149.25 95.23 199.07 183.21 147.53 126.08 404.81 217.43 160.38 207.25 111.01 97.24 43 E6a_E7a KnownJunction 1 46.90 169.31 178.23 147.70 102.80 165.13 76.84 179.33 264.15 247.72 181.73 167.45 47.07 170.23 117.56 171.15 172.14 381.21 153.32 149.31 208.50 102.20 86.64 44 ER7a ExonRegion 0 32.08 65.56 62.54 65.83 52.74 85.36 41.04 68.85 107.68 75.75 44.39 39.07 32.35 61.64 75.11 49.60 41.96 141.22 106.78 72.47 80.23 44.82 36.27