Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 WHAMM Gene 0 44.46 19.86 19.80 25.52 28.44 18.87 17.42 21.43 23.33 13.17 50.74 66.33 52.75 73.74 52.94 71.62 42.67 23.74 16.70 15.74 22.31 32.07 25.87 2 234505 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 286760 Transcript 0 42.32 23.09 28.39 27.41 22.69 18.99 16.33 24.03 21.88 13.84 47.74 37.79 35.59 84.00 79.18 65.27 42.47 26.11 24.52 19.08 32.99 27.66 28.22 4 ER1a ExonRegion 0 1.64 1.17 1.23 1.35 2.04 1.03 0.70 2.74 3.26 1.30 9.91 1.80 1.77 14.20 6.68 10.52 10.24 4.24 1.24 2.10 6.60 2.90 5.33 5 E1_Da NovelBoundary 0 0.00 0.00 1.66 3.60 0.00 11.58 1.94 3.90 5.70 4.86 12.42 0.00 0.00 2.47 6.30 0.00 0.00 11.98 0.00 2.62 16.06 5.69 22.45 6 E1a_E2a KnownJunction 0 14.67 22.17 11.24 8.92 22.16 29.81 6.32 14.38 9.20 8.14 78.81 13.20 27.43 44.85 45.12 40.50 35.72 32.58 4.80 31.45 23.17 29.21 19.63 7 ER2a ExonRegion 0 25.46 8.99 19.55 15.16 24.90 11.71 13.81 11.79 20.82 14.95 74.36 55.19 45.55 93.09 34.11 64.93 57.77 32.01 12.74 16.07 21.76 28.59 23.92 8 E2a_E3a KnownJunction 1 24.82 8.49 14.07 12.55 40.75 8.35 14.84 22.02 28.59 15.10 83.65 103.23 67.20 107.19 22.75 57.42 81.07 20.73 12.42 11.76 22.55 16.47 16.73 9 ER3a ExonRegion 0 35.00 16.90 31.44 26.78 45.72 21.42 22.94 33.63 44.36 25.88 83.59 80.60 73.27 131.39 46.96 86.59 67.11 42.76 15.65 17.67 27.60 31.94 30.57 10 E3_Da NovelBoundary 1 0.00 2.83 0.00 5.59 8.49 2.33 7.95 5.09 6.31 0.00 7.05 38.26 39.45 20.31 0.00 12.56 0.00 5.43 0.00 0.00 0.00 0.00 4.35 11 E3a_E4a KnownJunction 0 3.48 15.92 16.17 15.82 19.61 0.00 16.43 14.17 19.79 12.68 31.90 42.61 0.00 22.78 6.06 28.71 15.80 15.63 11.95 14.32 2.66 8.94 12.38 12 E4_Aa NovelBoundary 1 38.60 5.33 4.55 5.66 31.49 14.65 24.11 0.00 8.91 2.90 5.16 42.01 46.43 18.89 13.35 7.78 13.65 0.00 0.00 6.52 2.78 0.00 8.19 13 ER4a ExonRegion 0 63.89 25.90 31.09 36.47 40.23 21.67 31.75 35.45 41.37 26.23 99.84 127.90 95.01 127.20 46.64 93.13 80.79 33.43 15.36 22.40 20.26 37.98 31.47 14 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER5a ExonRegion 1 81.24 33.39 21.05 36.30 53.71 33.32 34.90 26.62 28.37 22.57 39.25 134.97 131.66 75.05 46.63 79.16 41.24 14.69 6.85 13.25 10.71 46.75 19.12 16 E5_Da NovelBoundary 0 0.00 10.06 11.27 21.91 3.65 2.73 7.99 12.86 7.96 4.73 0.00 16.66 6.82 6.71 4.45 7.86 4.77 0.00 0.00 12.21 0.00 16.35 0.00 17 E5a_E6a KnownJunction 1 38.60 19.40 9.82 7.09 33.87 15.50 20.62 8.91 9.20 18.51 14.42 74.42 73.86 29.25 32.63 35.46 21.69 12.44 3.86 2.81 13.53 34.72 7.60 18 I5_SR1 SilentIntronRegion 0 5.22 5.02 0.75 3.34 8.80 0.00 7.08 6.36 0.00 0.70 0.00 5.87 15.89 1.65 3.02 3.67 0.00 1.89 1.31 1.75 0.00 4.28 0.00 19 E6_Aa NovelBoundary 0 0.00 2.89 18.27 5.16 7.89 0.00 8.17 14.05 2.86 1.05 7.21 6.30 6.82 7.42 0.00 3.50 4.30 0.00 0.00 2.36 0.00 0.00 0.00 20 ER6a ExonRegion 1 79.91 40.35 25.70 48.43 51.27 37.17 32.74 33.19 45.23 26.73 73.14 219.47 181.66 113.28 62.33 119.06 67.90 26.27 18.60 21.65 35.51 65.86 39.05 21 E6_Da NovelBoundary 1 12.22 7.83 7.78 16.78 29.03 50.26 9.10 3.45 17.25 4.62 2.16 29.86 25.97 50.09 9.52 0.00 16.92 0.00 0.00 12.46 18.72 7.53 7.17 22 E6a_E7a KnownJunction 1 83.87 40.06 38.14 63.89 16.30 37.71 22.57 54.30 60.53 18.96 74.65 202.12 145.77 134.03 55.63 191.92 82.09 45.14 34.73 27.36 19.40 87.87 69.66 23 E7_Aa NovelBoundary 0 53.94 6.25 9.20 17.01 32.09 5.68 15.28 14.75 21.79 2.58 10.00 31.06 12.50 15.89 19.78 22.90 8.42 7.17 17.69 18.22 6.30 16.72 7.77 24 ER7a ExonRegion 0 110.33 34.06 33.63 55.05 56.93 35.60 36.74 49.45 56.73 20.54 123.93 238.92 153.69 137.64 73.50 149.39 110.60 41.14 21.89 30.45 39.11 84.49 57.72 25 E7_Da NovelBoundary 0 10.52 5.79 11.15 9.12 20.63 0.00 4.06 10.84 9.17 5.35 4.79 0.00 0.00 2.47 0.00 3.76 4.77 4.23 13.46 0.00 0.00 9.31 0.00 26 E7a_E8a KnownJunction 1 215.67 59.46 25.90 50.98 88.37 73.93 66.64 48.96 44.70 23.05 80.13 237.08 216.87 127.85 66.26 157.31 110.80 31.59 8.94 27.74 20.57 79.85 63.42 27 E8_Aa NovelBoundary 0 13.48 5.72 2.69 17.45 4.33 0.00 20.54 2.18 3.59 1.67 0.00 6.30 7.63 0.00 4.45 3.25 3.46 1.78 3.67 3.26 2.66 3.12 0.00 28 ER8a ExonRegion 1 137.24 55.84 42.28 78.10 66.22 51.56 46.77 55.96 52.02 28.31 99.32 243.17 173.58 176.93 98.01 226.69 113.23 48.56 27.94 23.43 37.65 107.78 87.21 29 E8_Da NovelBoundary 0 40.45 46.24 11.65 41.25 3.31 12.38 5.43 21.85 23.73 4.84 19.90 24.46 32.47 21.13 14.71 12.13 18.14 2.11 0.00 11.57 2.41 5.76 4.27 30 E8a_E9a KnownJunction 0 85.87 37.36 49.76 68.09 58.57 64.28 35.46 59.97 53.38 33.04 115.77 240.98 149.99 175.82 102.36 184.23 80.32 42.32 20.61 27.74 23.78 111.08 76.57 31 I8 Intron 0 15.40 7.08 6.72 8.40 10.83 4.72 7.78 4.25 5.78 2.55 6.29 13.20 12.06 8.39 9.65 14.04 6.71 3.76 3.31 3.65 2.64 3.30 3.98 32 I8_SR1 SilentIntronRegion 0 34.55 8.49 10.18 13.21 29.28 13.20 13.95 5.34 5.19 3.11 3.58 22.16 26.01 10.30 7.50 18.17 8.53 3.35 2.28 3.65 2.96 5.42 2.55 33 I8_AR1 ActiveIntronRegion 0 21.87 6.74 3.61 11.86 13.90 3.13 11.19 2.14 6.17 3.13 6.00 13.75 18.76 8.23 10.71 15.54 8.84 1.72 2.35 1.53 5.03 5.03 2.74 34 I8_SR2 SilentIntronRegion 0 12.09 7.03 7.13 7.14 8.37 4.30 6.41 4.64 5.75 2.36 6.62 12.24 9.19 8.26 9.61 13.31 6.05 4.28 3.64 4.16 2.05 2.69 4.41 35 E9_Aa NovelBoundary 0 16.97 0.00 13.25 17.05 12.22 0.00 15.24 8.67 3.59 1.50 9.16 37.96 6.17 22.96 4.45 12.05 18.51 16.25 3.76 9.01 5.44 12.06 0.00 36 ER9a ExonRegion 0 49.59 17.41 23.22 37.48 37.82 24.56 17.55 32.71 33.65 17.32 77.36 134.51 100.80 115.82 64.88 111.82 59.41 36.74 23.06 14.29 34.19 49.36 37.61 37 E9a_E10a KnownJunction 0 50.31 8.35 32.14 31.20 24.28 20.05 4.50 36.23 28.39 14.77 65.28 61.82 40.42 105.25 78.74 95.96 43.38 22.18 21.55 14.45 51.09 20.76 23.39 38 E10_Aa NovelBoundary 0 33.71 6.64 14.04 4.13 3.23 5.56 5.17 0.00 4.86 1.58 5.11 0.00 0.00 14.19 0.00 7.86 0.00 0.00 0.00 2.81 0.00 0.00 8.62 39 ER10a ExonRegion 0 42.43 10.78 34.57 26.05 23.40 25.20 6.77 32.84 22.98 16.27 63.79 60.21 38.50 89.29 74.35 66.84 54.66 30.64 17.70 12.22 51.45 19.09 14.89 40 E10_Da KnownBoundary 0 48.53 21.31 41.87 30.30 30.81 23.79 10.60 32.82 18.58 21.73 53.96 42.76 73.21 104.89 82.08 75.02 74.05 36.44 24.47 17.45 53.81 22.72 18.18 41 E10a_E10b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 42 ER10b ExonRegion 0 23.42 16.01 31.92 24.95 13.24 15.27 9.55 25.01 20.54 14.27 47.56 37.43 39.00 102.30 80.46 52.52 47.80 26.99 22.10 13.98 42.43 19.75 27.36 43 E10_Ab KnownBoundary 0 56.23 15.46 50.29 38.12 36.42 56.62 21.99 42.51 37.35 11.28 57.38 69.62 27.11 113.49 51.05 101.85 63.58 48.46 38.31 27.74 61.59 15.37 35.00 44 ER10c ExonRegion 0 38.26 17.48 32.88 33.61 43.75 29.92 13.00 27.39 30.77 13.53 79.71 45.81 30.96 125.28 96.37 100.84 66.94 45.97 21.89 20.05 41.02 32.64 36.72 45 E10_Db KnownBoundary 0 49.71 12.76 29.51 28.13 27.67 40.09 21.42 19.26 34.26 5.08 134.19 54.92 27.27 85.82 104.58 147.40 71.15 38.01 23.25 14.51 47.69 17.82 30.99 46 ER10d ExonRegion 0 61.22 30.17 24.87 29.88 32.13 22.71 23.11 23.05 23.21 13.41 47.91 38.14 32.17 65.70 77.89 78.02 37.15 25.23 26.94 24.18 23.55 35.57 29.07 47 IG19 Intergenic 0 7.58 15.70 10.30 17.60 11.61 23.17 10.11 4.68 11.97 11.70 0.66 4.59 1.78 2.67 1.62 5.11 1.28 5.98 6.20 5.88 0.95 1.67 1.73 48 IG19_AR1 ActiveIntergenicRegion 0 17.87 24.99 15.00 15.95 7.15 3.34 6.12 7.92 5.58 3.27 2.25 3.84 3.02 2.46 3.81 5.46 1.44 7.44 5.36 3.88 1.22 1.65 3.94 49 IG19_AR2 ActiveIntergenicRegion 0 29.84 82.27 58.43 102.08 77.10 172.24 58.92 22.10 68.60 80.66 0.47 22.70 4.26 8.37 1.76 20.77 0.40 14.56 19.92 24.52 0.81 8.68 1.45