Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF710 Gene 0 29.97 31.05 32.46 34.84 27.76 40.64 29.03 41.54 51.16 55.51 99.25 28.58 27.08 64.96 62.12 51.61 43.57 138.34 61.69 43.90 61.18 39.32 35.89 2 268154 Transcript 0 12.91 16.35 27.43 27.58 23.65 21.98 14.49 29.29 39.95 40.48 119.99 42.79 38.29 77.79 67.08 50.30 51.02 89.71 44.92 29.58 71.58 32.89 25.79 3 ER1a ExonRegion 0 5.32 0.67 0.74 0.46 0.91 1.57 1.11 0.59 1.20 0.64 10.47 2.45 2.57 12.25 6.45 6.61 7.82 4.83 3.44 0.71 6.78 2.11 1.34 4 E1a_E2a KnownJunction 0 0.00 3.35 1.39 7.26 4.33 2.50 2.25 5.83 2.69 4.49 25.11 0.00 0.00 23.66 4.45 7.86 16.55 10.53 8.66 3.26 13.65 4.71 0.00 5 I1_SR2 SilentIntronRegion 0 8.64 5.42 7.82 7.20 9.20 6.28 11.71 7.76 7.67 6.28 4.98 9.35 5.26 3.53 5.71 9.89 6.34 13.85 7.18 9.21 8.18 1.65 11.60 6 I1_AR3 ActiveIntronRegion 0 15.48 7.38 5.42 6.07 8.36 10.59 19.83 9.65 8.84 5.78 5.88 9.41 7.56 2.71 6.15 10.28 10.88 22.21 10.15 12.10 12.80 2.39 13.50 7 I1_SR3 SilentIntronRegion 0 29.21 5.64 9.79 11.37 11.42 6.10 14.20 13.32 14.76 10.31 7.25 12.19 21.26 5.69 11.23 14.95 8.29 27.34 9.86 12.73 9.28 3.88 16.87 8 I1_AR4 ActiveIntronRegion 0 8.94 4.45 6.24 10.30 11.17 5.15 12.74 8.81 12.05 4.38 1.87 5.97 10.75 3.75 6.24 6.92 5.54 13.20 15.51 9.38 6.03 1.60 13.20 9 I1_SR4 SilentIntronRegion 0 14.11 6.15 6.14 4.44 9.38 3.00 12.81 8.64 8.83 5.98 4.14 10.52 8.20 2.46 5.22 7.44 5.12 10.74 3.04 7.43 5.61 1.18 9.56 10 I1_AR6 ActiveIntronRegion 0 26.75 14.16 16.61 11.41 22.39 4.59 20.94 13.53 22.01 10.48 7.87 9.31 10.96 3.19 12.32 35.32 12.07 22.07 12.95 15.54 10.89 3.16 23.27 11 I1_AR7 ActiveIntronRegion 0 24.75 11.05 11.88 2.73 10.35 0.00 18.94 10.22 18.47 8.83 6.13 12.99 8.56 1.84 5.68 20.55 5.88 21.85 9.28 10.36 8.81 0.00 6.51 12 I1_AR8 ActiveIntronRegion 0 16.33 12.20 9.80 2.73 8.03 0.00 15.51 10.37 13.76 6.88 2.49 12.99 14.07 0.46 2.49 15.29 5.66 18.48 6.37 7.60 11.33 0.00 2.94 13 I1_AR9 ActiveIntronRegion 0 26.08 11.35 6.14 6.31 11.61 3.17 12.79 11.88 7.11 5.11 5.04 9.86 8.70 2.67 8.30 7.72 4.53 13.48 3.90 11.64 9.02 2.08 10.23 14 I1_SR6 SilentIntronRegion 0 14.92 7.10 5.00 6.25 6.82 4.05 8.13 7.67 10.79 7.78 2.39 7.34 8.18 2.44 6.34 9.29 7.11 13.92 5.41 8.40 9.08 1.82 9.74 15 I1_AR12 ActiveIntronRegion 0 17.22 8.89 5.51 9.38 23.81 4.90 18.68 11.21 10.64 9.60 5.16 11.35 15.64 3.45 5.77 12.17 6.42 13.05 11.25 8.72 2.74 2.28 8.20 16 I1_AR13 ActiveIntronRegion 1 0.00 0.29 3.68 2.53 8.03 0.00 1.32 10.37 4.23 2.29 0.00 16.08 0.00 6.50 5.80 11.89 3.30 6.07 14.11 4.26 7.24 0.00 8.81 17 I1_AR14 ActiveIntronRegion 1 7.41 2.82 5.72 5.68 11.97 2.55 3.13 16.76 9.47 3.54 0.00 25.86 4.56 6.99 5.56 20.64 5.41 13.40 12.65 4.43 10.28 3.30 7.75 18 I1_SR7 SilentIntronRegion 0 11.64 4.93 6.60 6.67 8.74 4.55 8.07 9.61 12.62 7.82 3.20 6.60 5.11 3.38 6.48 11.60 4.61 23.31 6.22 9.60 8.69 2.38 10.82 19 I1_AR15 ActiveIntronRegion 0 41.79 13.69 7.46 8.92 19.55 5.90 17.07 16.75 12.39 11.69 5.37 12.30 13.49 3.01 5.84 11.97 7.26 10.78 9.43 10.15 7.52 2.64 9.98 20 I1_AR16 ActiveIntronRegion 0 5.14 0.00 3.68 0.00 21.41 3.67 0.00 1.73 12.35 4.59 1.93 2.68 10.50 3.02 9.67 6.09 1.26 0.00 0.00 3.24 0.00 2.08 7.69 21 I1_AR19 ActiveIntronRegion 0 5.34 3.12 5.91 5.71 4.95 1.53 4.83 5.65 8.38 4.54 3.49 9.02 4.58 2.85 4.61 6.59 8.71 21.87 4.21 8.14 15.30 2.59 10.00 22 ER2a ExonRegion 0 10.44 9.55 28.62 17.20 9.47 11.79 10.23 23.76 37.00 35.52 117.81 31.19 32.91 76.53 82.04 53.65 47.89 84.40 39.20 28.34 71.83 38.39 33.88 23 E2_Da NovelBoundary 0 0.00 0.00 5.38 3.66 0.00 0.00 2.25 2.51 3.27 4.38 2.53 0.00 20.13 0.00 0.00 0.00 0.00 6.67 0.00 0.00 0.00 0.00 3.24 24 E2a_E3a KnownJunction 0 6.45 17.30 46.04 30.67 14.86 19.76 8.88 47.11 57.64 69.20 244.06 81.78 60.87 132.32 121.64 53.40 86.68 108.32 68.14 18.92 146.10 25.11 19.38 25 ER3a ExonRegion 0 18.20 19.22 42.24 45.84 36.05 30.80 22.25 54.65 58.59 58.09 191.25 67.02 83.00 126.76 119.13 93.89 75.58 169.09 82.65 47.03 118.75 59.01 56.24 26 E3a_E4a KnownJunction 0 6.74 17.37 37.20 39.79 43.46 20.73 11.92 30.03 46.41 42.84 152.46 75.32 58.44 128.44 87.27 85.36 68.35 101.85 52.61 48.39 85.75 48.80 35.77 27 E4_Aa NovelBoundary 0 17.48 3.35 10.02 7.52 0.00 0.00 3.71 2.09 2.81 4.49 4.53 0.00 0.00 0.00 0.00 11.62 4.77 12.39 4.80 2.62 5.31 0.00 0.00 28 ER4a ExonRegion 0 18.07 18.89 35.16 30.87 27.60 19.16 21.13 38.15 47.41 44.24 138.15 60.04 48.40 96.81 73.87 68.34 67.11 92.38 56.83 38.88 82.48 49.56 35.52 29 E4a_E5a KnownJunction 0 5.70 12.76 18.95 28.47 35.99 28.39 9.14 8.71 45.08 36.72 114.08 43.06 38.31 47.38 58.59 33.58 49.09 53.52 14.02 23.78 64.93 27.37 11.35 30 I4 Intron 0 17.75 2.30 5.38 1.84 6.67 1.66 11.70 7.59 5.42 4.65 9.65 0.00 6.32 8.12 6.50 11.45 2.99 9.79 7.22 9.16 12.99 7.08 5.99 31 I4_AR1 ActiveIntronRegion 0 17.91 2.33 5.43 1.86 6.72 1.68 11.80 7.66 5.47 4.69 9.73 0.00 6.37 8.19 6.56 11.54 3.02 9.86 7.28 9.25 13.10 7.15 6.04 32 Ix Intron 0 14.70 55.02 16.68 37.87 254.83 539.37 340.03 42.35 22.89 24.06 6.01 9.78 14.57 9.34 8.14 8.69 7.24 56.76 45.43 21.78 7.65 6.47 9.13 33 Ix_SR1 SilentIntronRegion 0 14.70 55.02 16.68 37.87 254.83 539.37 340.03 42.35 22.89 24.06 6.01 9.78 14.57 9.34 8.14 8.69 7.24 56.76 45.43 21.78 7.65 6.47 9.13 34 Ix Intron 0 18.29 35.02 28.19 44.22 38.13 94.00 40.88 69.51 61.20 67.89 13.90 8.67 8.69 19.68 16.27 24.51 18.29 197.54 74.19 46.18 26.74 11.68 16.86 35 Ix_AR1 ActiveIntronRegion 0 21.14 43.59 22.02 40.66 48.41 91.32 43.03 50.52 42.66 49.20 10.04 13.09 12.06 18.50 12.00 19.54 15.38 111.44 57.50 32.98 27.08 9.98 13.79 36 Ix_SR2 SilentIntronRegion 0 15.87 27.22 35.07 48.83 28.69 98.91 39.68 90.23 81.28 88.28 18.11 4.43 5.50 21.33 20.95 30.09 21.65 288.75 92.71 60.55 27.04 13.67 20.35 37 E5_Aa NovelBoundary 0 25.34 28.15 31.49 63.96 56.62 110.67 44.74 89.79 64.32 86.07 6.69 0.00 0.00 15.25 0.00 36.57 30.95 252.45 70.87 48.32 55.23 2.57 28.85 38 ER5a ExonRegion 0 45.26 48.02 36.57 47.62 40.20 63.17 43.53 54.77 63.51 72.60 86.55 24.28 20.13 55.96 50.23 50.02 40.14 182.45 78.70 56.90 53.91 40.93 38.58