Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BBS4 Gene 0 65.91 39.44 37.41 59.08 41.20 80.36 49.12 29.37 68.63 49.75 76.30 45.95 40.04 77.86 63.56 78.74 69.04 59.75 92.92 38.15 98.41 69.74 47.42 2 268057 Transcript 1 68.29 44.54 5.88 8.32 40.44 99.75 74.71 9.74 31.77 28.80 49.11 0.00 3.37 54.96 24.44 76.58 68.07 34.46 120.25 16.15 104.34 65.51 72.50 3 395205 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.25 0.00 0.00 0.00 0.00 0.00 0.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 ER1a ExonRegion 1 38.03 29.88 4.19 5.66 19.97 65.82 46.07 6.30 22.71 20.06 34.26 0.00 4.26 35.98 16.34 53.64 45.25 26.69 76.99 11.06 77.64 44.91 57.11 5 E1a_E4a KnownJunction 1 166.84 103.73 13.45 19.31 101.36 233.45 178.06 22.92 71.35 64.04 113.08 0.00 5.84 128.91 56.99 176.11 158.95 76.69 283.77 37.39 235.37 151.61 160.40 6 E1a_E5a NovelJunction 0 20.89 16.18 0.00 7.03 8.06 51.56 18.99 0.00 7.81 10.50 2.47 0.00 13.31 4.83 0.00 0.00 9.54 0.00 18.35 0.00 3.15 5.57 4.35 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.49 0.00 0.00 0.00 0.00 0.00 0.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER4a ExonRegion 0 47.83 30.46 8.72 15.36 25.73 77.48 58.71 12.30 56.86 40.34 43.45 6.99 13.08 34.76 13.73 89.62 63.99 56.96 99.36 11.42 83.32 58.82 49.02 10 E4a_E5a KnownJunction 1 10.45 0.00 1.74 3.06 3.31 4.83 5.61 6.16 14.58 6.69 9.69 12.60 12.50 7.59 0.00 41.36 8.23 23.09 27.67 0.00 9.27 19.90 3.50 11 ER5a ExonRegion 1 10.34 2.34 9.40 9.13 10.60 9.74 18.11 10.07 32.72 43.38 62.46 22.19 10.79 18.45 13.53 23.78 59.66 21.57 28.91 17.90 89.36 21.07 17.22 12 E5a_E6a KnownJunction 1 10.08 2.70 21.55 19.48 22.58 15.96 7.55 20.13 74.42 71.67 117.98 18.61 41.23 33.79 28.43 30.76 142.50 17.16 38.59 38.73 155.62 29.27 27.66 13 ER6a ExonRegion 0 15.44 11.92 14.44 20.66 20.24 9.54 22.03 19.93 75.09 55.55 76.29 42.55 16.42 73.85 32.78 87.07 76.64 47.72 140.85 35.01 68.52 104.08 85.58 14 E6a_E7a KnownJunction 0 20.30 16.90 10.26 23.57 29.63 9.88 23.41 19.02 59.23 39.78 50.17 24.91 33.44 37.55 33.50 91.34 36.56 67.57 109.93 43.66 30.33 86.34 82.03 15 E6a_E8a NovelJunction 0 2.96 0.00 5.50 9.56 3.65 5.11 2.16 2.34 0.00 8.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 3.03 8.57 4.35 16 ER7a ExonRegion 0 16.84 21.23 11.86 30.97 57.65 83.19 62.29 14.77 53.22 36.20 75.06 55.55 44.18 38.86 32.87 72.05 58.56 52.45 74.60 37.56 44.45 63.01 31.67 17 E7a_E8a KnownJunction 0 12.82 36.51 16.56 39.95 50.59 138.16 102.41 25.14 72.74 36.21 81.34 65.87 51.94 62.10 38.32 77.16 67.41 35.19 71.25 40.59 55.04 80.77 42.43 18 ER8a ExonRegion 1 31.95 54.41 18.58 37.41 31.34 81.11 61.72 26.68 54.01 35.02 77.34 93.23 32.19 79.85 30.44 59.08 72.30 35.77 78.24 42.87 65.12 75.46 31.98 19 E8_Da NovelBoundary 0 0.00 17.83 0.00 4.69 3.31 2.27 15.68 2.55 12.76 13.27 0.00 6.30 0.00 0.00 4.45 4.02 3.83 0.00 17.88 12.91 6.18 9.31 3.41 20 E8a_E9a KnownJunction 0 69.42 17.23 23.03 33.56 41.43 56.22 54.63 26.08 52.52 37.15 90.13 87.63 41.56 71.05 30.41 48.79 64.24 38.51 74.54 37.84 92.85 77.52 29.45 21 ER9a ExonRegion 0 42.57 20.37 27.16 34.40 29.93 53.86 47.76 23.97 57.11 43.03 78.60 77.45 69.92 54.68 40.08 63.41 64.55 49.62 84.71 43.30 73.62 69.80 33.28 22 E9_Da NovelBoundary 1 0.00 0.00 0.00 10.52 0.00 0.00 9.01 5.09 8.16 2.71 0.00 0.00 19.32 2.24 0.00 0.00 0.00 0.00 4.52 8.25 0.00 0.00 4.10 23 E9a_E10a KnownJunction 0 65.27 38.48 29.74 38.72 28.61 85.58 49.06 21.24 64.38 48.59 94.71 93.33 106.65 63.39 63.17 82.29 57.50 46.30 114.36 61.17 67.15 55.48 34.83 24 ER10a ExonRegion 0 48.93 39.19 31.75 55.94 27.68 68.44 46.20 34.33 70.91 54.15 88.82 81.04 65.22 91.93 49.59 92.32 87.47 68.29 105.42 48.82 105.86 82.53 51.64 25 E10a_E11a KnownJunction 1 19.93 26.57 20.87 40.25 20.12 62.29 58.56 25.88 63.14 50.18 70.33 54.77 19.32 94.89 26.70 73.40 50.77 60.40 70.31 51.01 91.86 74.34 39.10 26 ER11a ExonRegion 1 29.21 20.78 22.35 46.02 36.93 77.02 50.29 21.75 77.70 52.95 81.74 40.22 63.27 95.73 32.07 51.71 55.09 52.85 92.95 54.35 96.00 64.59 52.49 27 E11a_E12a KnownJunction 1 43.86 8.55 25.34 64.63 43.21 107.72 56.57 23.91 85.82 59.45 71.33 31.51 111.36 90.82 45.99 55.80 70.03 55.55 132.71 46.79 90.38 63.32 31.58 28 ER12a ExonRegion 0 29.08 36.46 25.40 67.00 35.56 110.48 46.65 21.42 75.00 47.97 104.46 40.97 74.22 98.69 61.01 99.37 96.92 82.96 130.60 38.05 119.70 76.40 55.80 29 E12a_E13a KnownJunction 0 9.78 30.98 24.78 53.77 7.89 59.11 33.08 24.40 55.06 42.15 74.81 19.66 47.07 87.41 36.84 65.79 34.69 72.05 60.80 32.53 90.69 40.66 23.65 30 ER13a ExonRegion 0 35.86 25.80 21.05 45.71 23.42 78.24 32.07 19.48 62.55 37.44 97.54 39.84 39.51 93.16 53.46 82.21 81.72 54.62 84.63 31.40 123.39 62.48 49.42 31 E13a_E14a KnownJunction 0 39.34 47.95 25.52 62.06 51.10 157.52 56.88 24.64 65.36 55.47 72.54 49.37 28.24 91.24 81.71 89.72 90.60 85.97 161.42 25.44 167.73 53.03 66.50 32 ER14a ExonRegion 0 64.50 34.55 26.00 57.77 26.12 95.09 46.74 30.65 70.98 52.76 80.08 38.44 52.79 95.89 66.51 84.72 80.51 75.97 95.60 36.06 117.80 70.75 51.08 33 E14a_E15a KnownJunction 0 60.60 18.88 20.96 42.29 26.74 81.77 19.25 12.53 52.37 49.80 67.49 49.67 43.18 70.63 73.06 41.87 63.39 63.22 66.45 39.63 112.43 63.50 58.05 34 I14 Intron 0 9.18 3.46 5.79 4.09 5.39 2.81 5.25 5.69 4.54 4.65 5.58 9.34 15.74 11.90 10.05 16.67 11.13 9.11 7.40 6.09 3.43 3.72 3.99 35 I14_AR1 ActiveIntronRegion 0 16.33 5.74 11.56 6.43 9.09 5.38 8.15 10.38 7.10 7.28 10.57 16.84 28.58 22.49 18.68 31.82 18.81 17.82 13.20 10.29 6.22 7.08 7.43 36 E15_Aa NovelBoundary 0 9.78 9.47 4.02 3.70 0.00 2.44 7.77 16.68 4.75 12.17 12.69 18.91 18.51 10.42 37.83 42.13 16.46 19.86 17.51 11.82 8.65 2.82 8.02 37 ER15a ExonRegion 0 83.09 32.77 19.06 43.53 31.04 71.73 21.66 22.69 53.97 45.94 75.88 45.27 53.73 75.64 72.61 67.30 59.56 47.99 71.67 49.27 117.93 71.38 34.74 38 E15_Da NovelBoundary 0 56.16 5.39 15.11 30.50 12.22 24.02 28.26 21.93 29.86 14.18 37.59 13.95 24.19 35.61 29.05 42.89 44.04 31.46 41.60 21.67 21.25 11.33 23.05 39 E15a_E16a KnownJunction 1 110.76 67.55 21.47 54.80 7.13 79.10 28.66 29.78 58.54 34.97 69.39 24.01 19.80 64.16 71.45 70.49 13.84 65.99 81.70 40.72 110.09 64.60 19.04 40 I15 Intron 0 46.74 17.12 19.00 32.43 19.13 27.39 18.72 20.25 33.34 23.89 24.26 22.05 19.34 29.30 37.07 41.08 25.17 39.40 29.61 13.86 23.62 17.71 27.99 41 I15_AR1 ActiveIntronRegion 0 46.88 17.17 19.06 32.53 19.19 27.47 18.78 20.32 33.44 23.96 24.34 22.12 19.40 29.39 37.19 41.21 25.25 39.52 29.70 13.90 23.69 17.77 28.08 42 E16_Aa NovelBoundary 1 94.54 33.48 12.57 41.92 24.53 28.00 26.54 12.24 17.45 18.59 7.32 36.16 12.66 34.32 14.46 43.66 42.64 58.45 20.99 8.76 20.39 11.27 44.22 43 ER16a ExonRegion 0 71.78 49.55 43.74 74.28 58.00 127.66 64.25 40.51 69.02 50.10 78.42 47.41 40.13 92.48 69.92 82.82 68.99 89.02 86.48 43.14 138.31 82.62 53.46 44 E16_Da NovelBoundary 0 36.82 8.62 4.64 12.02 19.52 4.71 16.34 5.50 11.55 16.14 4.95 12.75 21.43 12.07 18.67 18.63 12.72 26.24 22.12 3.20 10.69 3.12 10.93 45 E16a_E17a KnownJunction 0 56.31 37.16 55.35 98.79 71.31 111.53 65.71 46.04 75.00 54.50 63.38 42.46 55.68 56.98 88.51 93.99 48.71 125.69 134.12 41.93 133.69 101.40 80.58 46 I16 Intron 0 19.23 9.62 5.87 9.61 7.09 6.77 8.27 8.29 11.84 9.70 6.95 9.61 16.32 15.65 13.65 17.72 15.62 13.48 9.95 8.46 10.42 7.89 11.11 47 I16_AR1 ActiveIntronRegion 0 6.35 3.61 2.98 1.67 4.92 11.86 8.31 4.18 7.71 4.81 1.59 25.91 17.93 10.19 3.32 14.48 7.93 14.13 6.22 4.56 11.09 4.64 9.95 48 I16_SR1 SilentIntronRegion 0 20.08 10.07 6.66 11.41 7.26 6.37 8.52 9.60 13.30 10.97 8.30 8.22 15.21 15.95 16.24 17.64 18.03 13.43 10.96 9.46 10.86 8.63 10.52 49 I16_AR2 ActiveIntronRegion 0 28.06 13.37 3.29 5.00 8.52 4.28 6.57 3.01 5.63 5.84 2.86 2.16 23.62 20.12 5.80 22.68 6.17 13.58 6.72 5.40 6.57 6.13 17.51 50 E17_Aa NovelBoundary 0 33.34 24.47 7.75 21.64 10.53 18.34 30.52 12.73 11.20 23.13 18.53 0.00 19.80 26.43 5.19 27.77 34.78 30.10 8.85 8.69 13.16 5.69 7.51 51 ER17a ExonRegion 0 78.99 52.22 70.32 95.41 45.49 88.16 56.42 40.95 103.41 71.55 96.90 42.74 48.08 106.15 90.66 116.53 79.01 91.26 154.32 51.04 163.21 88.83 58.89 52 E17_Da NovelBoundary 0 26.08 17.37 12.71 16.38 8.66 5.62 22.17 19.67 14.67 17.19 15.53 12.45 12.99 12.42 11.87 37.85 17.20 22.92 3.86 11.82 2.66 6.06 7.51 53 E17a_E18a KnownJunction 0 319.61 104.59 71.88 81.31 112.65 199.09 93.98 41.48 130.84 83.76 117.71 72.47 66.72 121.31 135.61 184.74 92.29 100.69 297.23 46.53 188.11 120.39 123.26 54 I17 Intron 0 30.72 18.24 9.20 10.24 16.18 9.61 13.48 5.97 11.69 9.30 8.96 15.50 34.16 19.04 16.01 27.56 15.62 11.86 11.56 11.37 5.11 9.87 6.81 55 I17_AR1 ActiveIntronRegion 0 30.84 18.31 9.24 10.27 16.25 9.65 13.53 6.00 11.73 9.34 9.00 15.57 34.30 19.11 16.08 27.67 15.69 11.90 11.60 11.41 5.13 9.91 6.83 56 E18_Aa NovelBoundary 1 75.20 57.69 10.29 30.00 27.76 25.04 34.23 12.28 17.77 14.80 0.00 55.82 39.12 24.66 25.84 51.61 21.51 31.55 12.52 15.28 20.39 21.13 4.18 57 ER18a ExonRegion 0 94.16 48.89 51.12 73.28 52.83 84.44 53.75 34.95 73.06 53.08 71.52 46.89 35.54 77.94 81.66 77.99 65.23 56.46 88.16 38.58 85.85 69.01 46.91 58 ER18b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.24 2.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 IG13_SR3 SilentIntergenicRegion 0 7.46 7.76 2.84 8.61 5.73 4.30 8.41 5.51 7.06 4.37 2.64 8.93 16.93 3.59 4.58 6.62 9.60 3.61 5.02 6.11 1.14 2.24 4.48