Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HMG20A Gene 0 103.09 120.73 83.48 110.33 97.69 177.31 96.56 106.99 93.08 126.95 170.91 112.72 126.82 165.43 129.01 167.55 170.18 190.02 182.08 91.60 78.61 79.87 65.53 2 336216 Transcript 0 10.25 12.48 3.31 5.46 8.34 11.33 8.24 6.75 9.53 14.03 28.77 4.75 3.49 20.76 14.31 29.24 33.58 22.51 18.93 10.20 16.39 13.24 13.59 3 435040 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 381714 Transcript 0 2.22 0.74 3.43 0.69 0.50 2.24 1.57 1.12 1.61 1.89 8.65 7.07 5.65 6.91 2.33 3.75 15.81 4.91 6.24 0.02 1.19 2.56 3.12 5 IG34_SR3 SilentIntergenicRegion 0 2.63 0.00 0.00 0.00 4.99 0.76 8.78 0.53 0.00 0.35 1.60 2.38 7.89 6.18 6.05 1.23 4.11 0.00 3.96 0.88 3.20 7.78 4.26 6 IG34_AR4 ActiveIntergenicRegion 0 26.01 5.25 4.31 8.74 21.30 17.73 26.40 11.09 11.49 6.58 9.14 11.84 49.49 21.08 38.51 20.47 33.18 5.35 10.94 1.80 21.28 32.73 69.15 7 IG34_AR6 ActiveIntergenicRegion 0 1.21 0.00 3.74 1.04 0.00 0.00 8.24 1.27 2.45 0.99 0.00 3.25 11.40 3.47 4.80 4.58 12.19 0.00 1.95 0.00 3.06 0.00 4.36 8 IG34_AR11 ActiveIntergenicRegion 0 10.58 3.10 0.00 2.12 4.20 1.37 6.26 0.27 0.45 0.58 1.50 2.89 19.06 9.80 18.01 6.37 19.49 0.00 10.21 0.00 18.99 11.51 8.72 9 IG34_AR17 ActiveIntergenicRegion 0 24.00 2.24 4.47 2.15 0.98 12.01 6.80 5.62 6.00 0.00 5.60 0.00 11.34 11.36 28.07 7.61 27.55 0.93 0.00 1.56 38.38 21.21 27.82 10 ER1a ExonRegion 1 16.97 12.43 3.77 6.61 9.55 17.16 15.60 10.91 15.36 25.77 54.96 8.78 6.20 38.55 22.33 55.51 64.97 45.03 36.26 17.56 32.77 26.48 26.70 11 E1_Ab KnownBoundary 0 0.00 3.09 1.83 6.06 0.00 0.00 0.00 10.15 7.12 5.00 36.75 6.30 8.28 9.83 10.01 17.17 57.78 14.34 28.80 12.91 42.19 12.43 16.30 12 E1_Ac KnownBoundary 0 3.78 2.50 3.25 9.69 0.00 4.54 1.81 6.41 18.69 37.66 46.85 0.00 25.16 56.04 26.58 61.86 73.59 67.24 88.94 30.87 27.31 37.05 56.68 13 ER1b ExonRegion 1 17.40 23.05 12.12 20.29 13.08 60.52 36.63 20.93 38.01 49.06 122.85 20.20 30.75 100.70 39.65 101.38 137.90 111.28 132.02 68.32 81.29 53.94 65.26 14 ER1c ExonRegion 1 81.15 152.08 37.97 54.83 123.81 319.45 152.94 54.22 78.62 94.89 178.45 48.46 57.05 208.82 97.26 291.67 196.10 305.35 222.23 130.32 101.67 88.26 102.95 15 E1a_E2a KnownJunction 0 0.00 0.00 2.48 0.00 0.00 2.38 0.00 0.00 1.10 0.00 2.05 5.40 0.00 2.47 4.45 0.00 9.54 4.06 0.00 0.00 0.00 2.27 0.00 16 E1a_E3a KnownJunction 0 20.00 56.63 36.28 26.77 137.27 317.89 149.18 24.89 40.77 69.28 71.49 73.82 88.79 95.89 47.35 151.41 107.15 148.15 83.67 50.75 64.37 37.54 47.38 17 ER2a ExonRegion 0 6.65 2.23 4.44 2.08 1.50 4.34 2.49 0.82 2.34 4.61 13.57 10.24 10.29 3.55 2.53 2.88 14.62 3.20 1.51 0.05 0.47 0.65 1.07 18 E2a_E3a KnownJunction 0 0.00 0.00 3.37 0.00 0.00 0.00 2.21 2.55 1.39 1.05 10.32 5.55 6.66 14.72 0.00 8.37 23.28 7.46 17.22 0.00 3.09 4.78 8.28 19 Ix_AR2 ActiveIntronRegion 0 7.65 0.88 3.73 8.95 9.18 0.00 10.35 8.41 2.75 2.68 1.71 12.89 30.49 0.70 0.73 0.00 1.73 1.76 0.00 1.16 0.50 0.00 0.27 20 ER3a ExonRegion 0 23.51 41.66 42.60 55.37 33.29 73.15 49.39 49.79 58.89 93.81 141.33 81.24 121.84 151.76 77.62 146.31 187.51 178.46 133.37 109.61 82.39 45.50 57.41 21 E3a_E4a KnownJunction 1 33.64 64.07 53.81 98.09 6.88 46.05 36.66 82.23 121.06 145.97 170.04 144.35 143.01 413.39 138.95 364.43 211.13 436.96 397.19 189.71 125.96 123.20 164.75 22 E4_Aa NovelBoundary 0 64.60 20.85 3.46 6.19 23.77 15.39 19.61 15.03 24.74 21.54 2.47 0.00 0.00 5.18 0.00 43.49 38.15 1.62 4.24 20.84 5.44 5.45 10.84 23 ER4a ExonRegion 0 49.42 62.42 75.96 74.65 75.84 185.73 80.79 82.27 101.97 130.74 201.47 114.58 137.94 244.40 146.63 245.68 224.66 335.09 259.95 128.13 145.82 79.27 99.53 24 E4a_E5a KnownJunction 0 46.67 89.79 65.25 53.31 93.89 266.04 197.23 60.63 73.64 82.55 211.63 125.29 238.46 187.00 143.40 136.37 164.94 205.15 138.45 90.76 91.92 34.17 53.10 25 Ix_AR2 ActiveIntronRegion 0 21.26 17.81 2.82 13.60 26.53 7.56 13.98 10.62 13.75 17.61 4.49 14.69 24.16 11.01 11.39 11.87 4.68 8.17 4.51 11.80 2.27 11.00 7.19 26 Ix_AR3 ActiveIntronRegion 0 15.60 21.48 5.78 24.10 14.94 3.90 14.92 10.16 11.72 21.90 13.39 14.41 22.07 10.65 15.75 27.27 20.56 18.05 11.11 14.69 9.71 12.11 5.30 27 ER5a ExonRegion 0 72.33 128.86 87.31 104.49 97.13 196.55 113.40 123.13 118.89 166.84 276.87 240.21 227.28 284.12 158.63 265.13 274.53 308.79 266.75 150.60 170.19 92.53 111.91 28 E5a_E6a KnownJunction 0 94.16 91.76 88.17 118.23 89.90 159.17 104.53 156.78 129.28 179.41 272.49 321.85 301.44 345.64 195.93 276.59 266.29 304.06 325.00 188.11 152.34 121.67 118.06 29 ER6a ExonRegion 0 56.75 84.16 69.96 105.57 76.83 147.48 86.20 122.60 111.95 151.24 240.73 273.99 233.37 295.59 135.29 256.47 258.98 302.20 221.85 138.51 131.56 70.32 100.55 30 E6a_E7a KnownJunction 0 94.46 128.20 53.69 101.69 83.79 143.50 147.77 94.35 96.50 127.16 247.01 282.54 266.54 336.04 167.75 276.34 290.70 283.38 193.70 129.69 126.21 60.31 97.74 31 ER7a ExonRegion 1 59.92 104.54 58.09 120.53 66.06 124.64 98.22 97.98 110.89 129.99 202.23 298.73 203.43 293.00 142.34 237.40 244.58 303.15 183.36 127.66 120.93 67.45 59.01 32 E7a_E8a KnownJunction 1 62.60 97.35 57.60 103.65 65.37 155.82 74.90 73.60 90.68 97.54 184.73 356.52 148.20 253.87 163.30 252.41 238.43 226.83 202.55 135.76 113.36 56.58 39.52 33 Ix_AR1 ActiveIntronRegion 0 2.88 4.20 3.07 8.85 10.61 4.62 7.49 3.73 11.67 11.12 8.15 23.35 35.48 9.69 3.91 9.77 10.89 1.59 4.03 4.64 4.13 11.81 4.01 34 Ix_AR3 ActiveIntronRegion 0 9.22 10.79 6.22 13.40 13.24 10.43 13.70 8.93 14.98 12.75 7.20 20.78 29.68 9.19 9.66 12.78 10.71 4.88 6.43 6.41 1.57 11.93 4.23 35 ER8a ExonRegion 0 66.61 90.20 66.25 101.21 106.33 216.61 102.94 93.15 107.96 133.93 221.29 242.34 180.20 276.53 131.32 237.61 222.07 293.21 219.87 127.83 105.60 73.72 72.72 36 E8a_E9a KnownJunction 0 67.49 121.29 63.92 76.81 85.40 192.45 91.28 90.32 101.62 123.38 255.28 195.81 173.20 228.68 92.34 179.87 264.05 307.25 228.34 109.81 112.19 72.62 66.24 37 ER9a ExonRegion 0 47.29 95.33 75.01 83.36 71.92 161.97 89.26 86.70 113.55 135.06 225.21 122.41 134.40 222.37 149.91 215.85 224.46 313.98 203.95 121.83 110.58 78.49 77.05 38 E9a_E10a KnownJunction 0 61.79 90.31 57.80 100.09 53.82 203.97 119.42 125.28 130.29 148.04 241.17 100.83 134.57 248.99 182.09 256.17 295.46 318.53 269.00 128.22 89.33 72.19 99.87 39 ER10a ExonRegion 0 63.63 124.55 86.21 127.03 108.64 226.74 116.56 123.95 143.30 178.53 254.12 114.32 135.75 241.82 166.12 259.91 295.26 303.44 273.47 136.65 93.83 108.08 95.57 40 E10_Da NovelBoundary 1 44.67 12.43 31.02 31.56 36.16 9.82 24.91 17.79 31.19 14.42 34.90 48.92 67.04 62.63 87.03 65.62 41.33 34.41 12.33 12.59 16.19 22.90 21.51 41 E10a_E11a KnownJunction 1 39.93 94.72 72.91 100.65 30.39 146.34 91.59 119.81 110.04 169.36 171.83 42.61 52.59 200.48 82.45 96.64 292.29 200.80 188.81 135.25 82.29 84.75 57.88 42 Ix Intron 0 17.38 8.49 6.84 16.44 19.53 14.77 18.63 14.65 19.90 10.75 27.66 70.44 62.73 27.67 17.29 38.31 27.88 9.86 12.80 9.71 7.14 21.28 13.00 43 Ix_AR1 ActiveIntronRegion 0 15.67 11.15 10.01 16.71 12.47 4.53 10.53 5.65 16.15 14.53 39.75 41.67 44.43 34.78 42.32 47.27 33.49 10.09 14.83 7.00 8.46 21.71 9.66 44 Ix_SR1 SilentIntronRegion 0 10.11 8.96 5.87 16.44 15.71 8.83 16.75 10.25 17.20 7.78 16.57 66.64 56.39 23.12 17.65 26.51 15.12 7.02 11.47 8.24 3.35 16.63 9.84 45 Ix_AR2 ActiveIntronRegion 0 14.95 6.73 4.96 15.45 15.66 13.67 19.72 12.31 24.29 13.54 34.68 71.17 49.51 32.17 14.28 44.72 31.33 14.93 14.42 11.26 10.71 17.31 19.56 46 Ix_SR2 SilentIntronRegion 0 21.95 5.47 5.69 22.05 22.79 21.88 18.27 32.62 28.82 10.63 35.90 88.95 103.42 24.83 13.65 38.74 32.76 10.00 8.18 9.20 4.85 29.39 12.02 47 Ix_AR3 ActiveIntronRegion 0 22.26 9.22 8.02 15.80 24.27 19.19 20.72 16.39 18.27 10.53 27.08 73.77 68.09 27.55 14.95 40.58 31.81 9.02 13.39 10.40 7.88 24.28 12.47 48 E11_Aa NovelBoundary 1 26.30 29.14 9.17 8.49 35.57 40.37 10.86 10.88 12.76 8.68 28.59 83.13 61.85 33.32 10.26 51.35 36.19 9.66 20.05 17.13 8.59 27.86 16.22 49 ER11a ExonRegion 0 80.49 129.35 66.87 109.49 92.91 209.90 103.10 114.66 113.37 165.07 242.72 134.93 115.79 211.64 107.91 235.71 240.40 283.76 248.80 116.73 118.68 106.97 86.64 50 E11_Da KnownBoundary 0 132.91 213.91 112.65 118.23 114.60 269.16 140.00 108.81 116.90 131.97 232.95 137.29 77.92 192.60 125.72 242.24 246.94 279.06 247.35 125.92 155.56 85.05 85.79 51 ER11b ExonRegion 0 155.71 150.26 111.96 141.42 123.43 188.72 107.91 128.64 90.68 123.63 133.33 92.94 132.48 123.43 151.36 119.02 121.43 115.59 155.51 71.60 45.82 79.48 50.01 52 ER11c ExonRegion 0 3.53 12.54 2.86 4.32 7.14 5.50 0.88 2.59 3.71 2.29 2.58 0.72 0.78 2.98 6.29 2.97 2.20 0.00 1.59 2.84 0.00 0.00 0.49 53 IG35_AR2 ActiveIntergenicRegion 0 1.36 2.45 3.32 9.57 3.01 9.84 3.43 7.95 16.57 13.34 0.25 0.56 0.99 0.78 1.22 1.74 2.54 9.04 8.48 2.07 2.01 0.47 2.26