Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	UBE2Q2	Gene	0	93.61	87.27	51.92	86.68	106.28	162.50	98.41	91.69	88.09	94.66	167.06	138.21	232.58	134.60	100.82	79.73	77.11	43.38	65.79	90.10	58.98	203.28	88.82
2	338677	Transcript	0	0.00	4.74	2.75	3.35	1.95	6.39	3.38	0.00	7.31	5.45	1.54	3.15	0.00	1.12	0.00	1.88	0.00	0.00	0.00	0.00	6.30	7.62	6.44
3	267938	Transcript	0	5.64	6.41	5.37	5.03	5.69	2.87	5.87	5.10	0.63	3.06	2.83	1.44	2.77	2.04	5.43	0.00	3.30	0.33	3.35	6.06	0.62	4.97	1.66
4	426727	Transcript	0	1.71	0.23	1.28	0.72	0.63	2.55	1.61	2.67	2.85	2.43	4.25	2.28	3.67	4.10	1.02	3.49	5.10	11.28	5.20	9.33	6.33	0.72	2.88
5	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1b	ExonRegion	1	2.47	5.80	5.83	5.27	3.91	29.91	9.82	10.45	12.76	18.39	50.53	5.80	7.78	39.07	10.80	28.36	33.73	36.44	19.06	22.78	55.59	21.67	41.86
7	E1a_E3a	KnownJunction	1	17.34	65.32	30.04	31.13	28.27	68.31	44.78	49.41	69.96	90.23	233.48	66.77	86.52	165.52	65.02	110.65	107.43	60.40	34.92	90.51	165.69	96.26	64.45
8	E1a_E5a	NovelJunction	0	0.00	3.22	14.01	35.09	4.41	5.91	0.00	43.25	25.67	37.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	47.75	4.61	48.07	0.00	0.00	0.00
9	E2_Aa	NovelBoundary	0	0.00	0.00	1.12	1.86	3.74	0.00	4.02	0.00	1.36	1.40	2.42	6.30	0.00	7.36	0.00	11.36	4.49	15.67	8.94	8.18	5.75	0.00	0.00
10	ER2a	ExonRegion	0	3.42	0.47	1.24	1.43	1.26	5.10	3.22	5.35	4.17	3.44	8.50	4.56	7.34	8.20	2.03	3.73	6.46	19.99	10.39	18.66	4.19	1.45	5.77
11	E2_Da	NovelBoundary	0	0.00	0.00	0.00	1.96	0.00	5.45	13.29	6.41	5.01	0.00	6.79	0.00	8.28	7.42	0.00	4.36	0.00	14.26	36.80	29.91	7.54	3.12	4.35
12	E2a_E3a	KnownJunction	0	0.00	0.00	1.33	0.00	0.00	0.00	0.00	0.00	1.53	1.42	0.00	0.00	0.00	0.00	0.00	3.25	3.74	2.57	0.00	0.00	8.46	0.00	0.00
13	I2	Intron	0	2.73	3.55	2.52	5.07	2.50	4.14	7.91	2.58	3.53	2.52	5.15	8.40	12.79	2.41	1.42	2.44	2.79	6.58	5.36	18.30	1.86	1.97	3.85
14	I2_AR1	ActiveIntronRegion	0	1.79	2.01	0.00	1.79	0.00	1.82	2.89	3.94	4.62	1.21	8.18	4.54	16.89	5.05	0.00	5.19	5.06	17.47	9.46	18.47	2.18	0.00	8.10
15	I2_SR1	SilentIntronRegion	0	5.47	4.22	2.47	5.79	3.98	7.11	9.35	4.64	5.72	3.59	11.11	9.69	16.81	5.71	2.12	5.02	5.79	18.38	11.06	31.61	3.08	2.35	7.87
16	ER3a	ExonRegion	1	41.36	50.98	26.90	48.17	43.84	109.43	42.51	50.60	63.49	80.73	235.04	80.73	127.37	196.18	64.77	108.74	129.51	71.86	70.70	99.19	156.03	132.30	104.08
17	E3a_E4a	KnownJunction	1	67.79	26.31	35.45	36.13	44.06	34.41	40.28	41.81	56.42	78.38	227.00	82.98	336.67	192.42	85.30	101.77	120.43	27.23	93.84	87.76	154.88	153.88	114.98
18	E3a_E5a	NovelJunction	0	14.74	35.13	19.99	34.26	50.17	81.94	85.72	32.82	34.35	43.54	29.85	37.51	36.69	35.79	9.89	17.43	13.00	30.05	12.71	65.13	27.80	56.15	27.74
19	ER4a	ExonRegion	1	50.49	42.26	34.08	52.56	64.75	96.67	76.97	40.58	58.09	65.48	251.20	119.74	269.79	186.00	61.09	117.95	132.26	43.20	90.37	88.15	132.60	143.94	105.08
20	E4a_E5a	KnownJunction	1	70.31	34.60	26.55	50.94	121.31	105.22	66.73	30.60	36.63	40.02	162.57	100.98	172.39	165.64	32.76	78.36	83.31	36.85	39.81	63.15	82.47	102.26	77.34
21	E5_Aa	NovelBoundary	0	5.63	6.05	15.58	32.60	20.37	15.50	62.09	17.58	13.63	16.65	0.00	0.00	12.66	0.00	6.06	0.00	0.00	3.69	3.67	22.05	2.84	0.00	0.00
22	ER5a	ExonRegion	0	44.73	56.74	41.15	80.30	122.10	140.81	73.48	66.29	62.89	65.13	195.25	153.55	331.27	179.36	80.56	101.55	98.26	50.35	64.03	107.87	95.53	178.31	115.75
23	E5a_E6a	KnownJunction	0	44.82	80.18	57.48	142.74	74.45	140.54	79.58	108.44	107.72	102.13	207.89	197.01	367.67	217.55	139.69	84.00	98.64	70.30	103.25	138.00	67.15	298.08	165.09
24	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	4.33	0.00	0.00	2.16	2.14	6.86	2.90	5.26	6.30	0.00	4.59	0.00	0.00	8.98	2.07	4.80	8.69	0.00	11.08	0.00
25	E5a_E10a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	5.28	2.12	2.22	3.04	2.61	7.37	0.00	0.00	0.00	0.00	4.36	0.00	0.00	4.33	0.00	0.00	10.84	14.34
26	ER6a	ExonRegion	0	50.71	58.17	56.12	146.79	106.65	151.46	102.25	113.72	126.64	105.21	277.24	258.29	447.28	236.10	119.40	121.14	123.73	67.42	100.03	142.46	72.63	308.04	139.33
27	E6a_E7a	KnownJunction	0	66.68	69.86	63.87	104.78	118.85	177.40	94.02	117.64	121.15	110.03	250.70	173.61	399.81	264.94	106.56	129.88	88.36	58.41	106.83	121.95	71.17	284.37	113.53
28	E6a_E10a	NovelJunction	0	6.59	3.22	1.54	0.00	0.00	11.02	12.32	2.55	12.79	4.41	0.00	6.30	12.99	7.42	0.00	3.25	0.00	0.00	0.00	0.00	0.00	16.17	3.41
29	I6_AR2	ActiveIntronRegion	0	19.05	1.02	2.45	4.09	5.35	1.83	11.92	0.00	1.24	1.15	0.00	0.00	4.69	1.62	5.80	1.98	3.30	3.70	6.37	3.19	2.20	0.00	1.47
30	ER7a	ExonRegion	0	104.66	82.23	34.81	76.31	197.06	224.22	132.30	90.98	111.06	102.21	284.50	238.63	440.37	228.29	121.37	105.49	132.35	57.82	110.59	130.86	86.96	307.45	161.17
31	E7a_E8a	KnownJunction	0	69.42	81.83	31.46	61.76	116.04	210.79	74.94	80.09	120.95	102.26	285.07	248.63	443.32	143.21	108.17	129.97	157.64	31.09	71.44	83.99	44.97	326.80	126.68
32	I7_AR1	ActiveIntronRegion	0	14.23	19.04	12.13	22.37	7.60	5.91	10.21	6.83	6.58	7.33	2.17	8.39	7.43	2.97	2.66	1.17	0.00	0.00	6.40	15.74	0.00	7.36	1.92
33	ER8a	ExonRegion	0	72.79	71.28	31.32	63.52	130.72	231.00	93.65	76.90	106.08	105.42	289.59	227.47	423.49	179.66	85.94	119.52	161.53	37.44	76.81	93.51	60.69	292.41	137.35
34	E8_Da	NovelBoundary	0	30.45	25.19	17.15	31.16	17.83	9.37	27.20	9.61	6.11	9.13	0.00	0.00	41.88	2.35	5.81	4.36	3.93	0.00	4.52	5.69	0.00	0.00	4.18
35	E8a_E9a	KnownJunction	0	98.46	68.94	20.73	57.30	145.67	184.10	127.41	74.71	92.27	83.35	300.39	250.58	396.89	230.56	149.58	199.95	152.03	37.27	99.86	111.54	76.48	331.82	178.49
36	I8	Intron	0	9.57	10.40	7.66	18.10	8.24	5.17	12.32	8.78	7.72	6.83	1.52	4.22	10.60	2.19	2.45	3.51	3.89	3.86	5.85	9.07	2.02	2.05	2.89
37	I8_AR2	ActiveIntronRegion	0	7.04	8.76	8.76	20.76	7.58	5.19	10.93	7.62	5.89	7.79	1.19	6.59	8.56	2.18	1.72	2.56	2.44	4.76	4.72	9.17	1.63	2.82	2.17
38	ER9a	ExonRegion	1	85.92	58.50	28.87	64.09	125.47	201.86	132.70	97.19	116.20	100.17	306.63	275.42	499.98	274.71	95.17	138.74	155.65	74.60	98.89	139.70	72.41	277.66	166.29
39	E9a_E10a	KnownJunction	1	95.57	67.36	48.46	80.38	129.63	227.26	155.81	115.34	133.01	101.08	312.82	349.91	678.20	355.88	99.26	163.46	220.66	88.42	112.00	124.96	102.92	262.08	143.58
40	E10_Aa	NovelBoundary	0	34.67	28.55	1.30	8.46	29.80	57.81	52.07	2.55	1.39	1.67	65.70	40.96	82.30	32.14	9.64	37.17	43.76	0.00	22.02	44.87	19.27	45.37	39.95
41	ER10a	ExonRegion	0	66.33	77.90	50.30	89.44	97.46	225.34	135.09	90.41	133.87	111.52	287.35	290.59	507.64	283.97	140.98	172.38	147.31	82.02	111.11	132.78	130.02	275.13	160.07
42	E10a_E11a	KnownJunction	0	43.42	45.45	42.10	95.79	88.79	172.85	110.98	85.43	119.56	102.37	263.07	287.19	464.09	205.72	181.59	202.51	111.08	70.97	134.97	130.71	136.53	245.67	176.10
43	E10a_E13a	NovelJunction	0	3.11	10.06	2.78	1.73	3.99	17.04	0.00	6.57	0.00	1.67	2.05	0.00	20.45	0.00	0.00	0.00	0.00	0.00	0.00	3.26	0.00	8.63	0.00
44	E10a_E14a	KnownJunction	0	0.00	9.47	5.50	6.69	3.90	12.78	6.76	0.00	14.61	10.91	2.68	6.30	0.00	2.24	0.00	3.76	0.00	0.00	0.00	0.00	12.60	15.25	12.89
45	I10	Intron	0	5.63	9.91	2.91	10.31	5.75	7.41	13.75	6.22	7.86	4.49	8.94	13.52	22.63	8.82	3.86	11.95	7.67	14.31	7.04	16.18	3.83	7.23	5.68
46	I10_AR1	ActiveIntronRegion	0	8.31	12.14	7.04	20.36	6.91	10.91	19.03	7.64	17.10	8.72	19.49	15.00	26.82	14.39	4.66	19.62	11.91	26.52	9.68	18.74	13.75	12.47	11.90
47	I10_SR2	SilentIntronRegion	0	5.99	12.68	1.52	10.73	8.18	9.60	15.81	7.78	7.53	5.32	10.23	14.62	20.51	8.77	3.14	13.84	7.66	14.47	7.89	18.15	3.12	8.00	5.34
48	ER11a	ExonRegion	0	58.66	65.12	48.71	90.67	94.58	214.55	88.65	90.76	119.88	96.34	327.05	246.07	468.05	256.05	113.74	217.45	140.39	97.10	168.82	142.12	158.58	337.36	254.71
49	E11a_E12a	KnownJunction	0	105.35	85.77	62.86	86.70	120.80	187.11	90.75	96.36	111.14	85.13	366.51	215.17	359.39	232.03	89.13	224.47	172.60	85.77	214.78	148.03	160.99	261.28	255.49
50	ER12a	ExonRegion	0	94.96	88.67	65.58	97.16	129.30	203.59	101.61	102.75	130.34	132.59	267.20	179.58	400.80	289.67	135.57	168.27	158.55	88.98	123.90	166.02	152.22	257.36	171.70
51	E12a_E13a	KnownJunction	0	190.18	135.63	85.92	129.15	221.99	284.72	174.22	113.28	143.69	176.89	321.13	248.78	603.04	346.70	265.53	190.55	190.00	102.72	168.85	226.20	167.97	341.99	157.75
52	E12a_E14a	NovelJunction	0	3.26	0.00	0.00	1.63	0.00	0.00	0.00	1.64	0.00	2.77	7.84	23.71	0.00	2.24	0.00	0.00	4.77	1.82	0.00	3.26	2.35	2.51	0.00
53	E13_Aa	NovelBoundary	0	10.52	25.65	12.12	31.80	44.57	4.32	37.76	9.41	4.28	9.21	5.32	0.00	19.48	9.42	6.30	0.00	9.54	4.73	0.00	21.09	6.18	12.37	4.35
54	ER13a	ExonRegion	0	106.58	106.02	55.43	116.80	141.61	279.67	172.55	82.24	129.39	152.44	308.14	187.91	364.21	237.78	149.31	180.50	161.99	98.90	178.38	160.59	118.54	358.30	193.73
55	E13a_E14a	KnownJunction	0	145.51	130.57	40.74	130.32	179.71	396.76	240.95	65.23	124.45	135.76	222.42	131.59	331.80	247.63	182.34	255.06	139.50	88.88	191.82	133.40	78.95	415.90	296.89
56	ER14a	ExonRegion	0	166.20	153.17	88.07	140.84	170.50	246.27	155.52	151.01	130.40	145.21	195.30	188.60	294.60	151.08	159.67	88.63	78.43	38.86	76.53	114.05	47.34	297.89	95.90
57	E14_Da	KnownBoundary	0	28.08	21.44	20.08	12.99	21.73	21.58	24.38	16.06	1.10	9.43	4.53	5.25	17.04	7.06	13.35	0.00	4.02	0.00	12.52	16.11	2.35	24.92	6.91
58	ER14b	ExonRegion	0	5.64	6.41	5.37	5.03	5.69	2.87	5.87	5.10	0.63	3.06	2.83	1.44	2.77	2.04	5.43	0.00	3.30	0.33	3.35	6.06	0.62	4.97	1.66