Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HOMER2 Gene 0 4.36 36.30 36.26 21.92 8.20 45.77 15.83 5.64 36.03 46.44 0.60 34.33 10.25 43.40 6.56 91.18 3.40 73.12 44.30 60.95 17.48 6.12 9.08 2 450735 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 426485 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 399166 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 304231 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 1.13 2.08 1.87 0.39 0.00 8.83 0.36 0.00 2.72 2.44 0.00 0.79 0.71 3.83 0.00 12.23 0.41 9.43 3.75 3.92 0.83 0.46 2.61 7 E1a_E2a KnownJunction 0 0.00 6.71 7.78 3.43 0.00 0.00 0.00 12.94 17.01 13.65 0.00 0.00 6.82 13.77 0.00 30.25 4.77 46.05 13.37 30.68 14.27 2.45 0.00 8 ER2a ExonRegion 0 2.31 8.04 22.88 10.09 2.66 41.00 8.38 5.19 37.24 34.06 1.26 15.83 7.23 31.70 2.81 78.87 1.68 62.20 38.61 60.12 23.72 1.95 13.65 9 E2a_E3a KnownJunction 0 3.78 15.06 63.75 20.54 20.63 194.60 74.90 48.88 46.15 58.24 0.00 31.21 13.15 47.62 10.51 96.04 0.00 163.53 101.27 188.94 22.73 11.57 17.07 10 ER3a ExonRegion 0 3.16 18.81 39.59 18.13 8.11 63.43 16.84 10.16 56.21 59.00 1.49 52.87 16.88 45.73 4.77 101.03 5.60 93.23 60.52 85.38 29.75 6.22 13.93 11 E3a_E4a KnownJunction 0 6.74 19.08 55.47 15.38 7.05 24.76 22.13 44.89 53.18 93.10 0.00 66.92 19.32 60.63 8.90 84.68 4.77 103.01 59.86 139.91 17.05 3.12 16.56 12 ER4a ExonRegion 0 6.28 26.13 43.86 23.87 6.59 50.18 19.73 9.03 49.95 80.49 2.12 53.30 17.25 57.00 4.21 120.39 6.96 99.38 70.97 86.27 20.95 9.59 11.62 13 E4a_E5a KnownJunction 0 0.00 0.00 0.00 3.83 0.00 17.55 4.24 0.00 0.00 9.37 0.00 38.71 0.00 17.19 0.00 15.72 0.00 25.49 0.00 5.31 0.00 2.51 3.41 14 E4a_E5b KnownJunction 0 3.70 25.98 39.83 17.58 12.99 29.02 22.48 1.89 48.84 59.55 0.00 62.72 12.99 23.43 0.00 101.17 3.83 90.58 68.33 69.48 8.59 5.94 8.54 15 ER5a ExonRegion 0 0.44 2.33 2.13 6.97 0.31 20.33 6.50 0.05 2.54 16.09 0.00 20.50 3.31 12.90 4.86 23.34 0.19 22.34 4.40 12.64 2.46 0.80 3.54 16 E5_Ab KnownBoundary 0 0.00 6.31 9.22 21.68 0.00 27.26 39.97 19.39 3.47 26.86 0.00 0.00 6.82 7.00 11.00 24.35 0.00 30.22 4.80 42.12 2.90 0.00 0.00 17 ER5b ExonRegion 0 4.65 35.17 39.34 18.72 7.24 60.58 25.38 6.44 37.96 68.63 0.00 70.25 18.89 50.72 11.93 107.16 7.63 94.64 59.50 79.99 13.64 8.18 9.39 18 E5a_E6a KnownJunction 0 7.11 29.53 37.91 21.44 3.40 50.88 32.28 10.27 46.35 52.49 0.00 54.77 45.94 56.86 10.38 78.87 7.48 118.76 57.70 85.84 19.27 17.02 7.94 19 E6a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER6a ExonRegion 0 4.00 25.08 38.53 24.91 6.84 42.08 21.77 7.78 38.70 54.16 0.00 46.90 30.22 58.38 10.48 96.43 4.40 131.91 66.72 76.48 22.16 14.12 15.50 21 ER6b ExonRegion 0 1.13 27.88 46.69 23.45 11.51 40.82 13.54 5.40 43.88 52.00 0.00 23.49 7.19 51.29 6.95 94.36 4.13 84.57 43.61 83.38 16.87 5.05 8.54 22 E6b_E7a KnownJunction 0 10.96 32.30 61.20 27.14 23.17 65.76 19.52 7.15 48.49 46.12 0.00 39.16 0.00 61.75 5.19 129.28 4.30 88.30 49.13 77.34 21.62 14.88 4.35 23 E7_Ab NovelBoundary 0 13.71 45.78 46.33 30.23 23.01 110.85 28.44 6.53 59.90 41.66 0.00 18.91 13.15 45.32 15.08 133.98 3.93 104.38 63.15 101.37 22.05 4.90 7.43 24 ER7a ExonRegion 0 7.21 30.80 46.29 27.01 21.31 84.08 19.17 8.32 44.51 43.58 0.00 23.25 8.86 52.69 9.89 125.93 1.47 100.26 53.44 85.03 20.98 9.34 6.20 25 ER7b ExonRegion 0 6.43 36.43 42.70 24.32 7.29 66.08 21.40 11.13 52.05 50.98 0.00 36.75 8.77 49.23 5.80 128.79 1.53 115.81 52.63 99.27 19.26 0.60 7.03 26 E7a_E8a KnownJunction 0 9.56 40.26 44.91 30.87 7.22 72.06 21.99 12.03 65.22 60.47 0.00 32.86 13.64 49.44 0.00 139.54 0.00 121.62 69.84 96.26 14.15 0.00 18.78 27 ER8a ExonRegion 0 6.69 48.45 54.20 29.92 8.13 57.93 18.63 10.01 56.10 67.95 0.00 38.38 7.18 64.94 7.24 164.97 4.03 115.36 57.85 84.16 18.28 6.48 12.58 28 E8a_E9a KnownJunction 0 17.63 54.40 70.19 30.27 11.04 48.15 31.66 9.61 60.73 74.03 0.00 51.02 0.00 58.21 0.00 87.33 0.00 107.07 74.45 70.56 8.53 10.65 7.77 29 ER9a ExonRegion 0 5.49 53.76 41.28 28.33 10.66 47.28 18.39 5.04 34.74 47.80 0.64 37.39 10.86 48.00 8.29 94.43 3.31 70.77 45.84 56.50 18.42 7.98 8.77 30 IG20 Intergenic 0 1.36 16.59 7.61 14.45 7.62 35.92 12.47 4.85 32.02 31.33 0.16 6.76 2.14 6.86 1.56 18.56 1.27 41.52 23.79 29.52 10.10 3.09 4.16 31 IG20_SR3 SilentIntergenicRegion 0 0.30 7.56 5.25 4.74 1.13 14.11 5.70 2.67 18.22 16.79 0.00 2.98 2.28 5.37 1.04 14.25 0.69 39.00 15.59 19.55 10.02 2.36 4.70 32 IG20_AR3 ActiveIntergenicRegion 0 0.61 7.49 5.34 8.57 1.04 20.06 7.73 0.93 24.45 22.71 0.56 4.48 1.11 4.85 0.83 13.18 0.96 35.14 15.04 18.45 11.35 2.88 3.45 33 IG20_SR2 SilentIntergenicRegion 0 1.16 13.10 5.42 5.33 5.67 34.03 10.96 1.58 27.11 30.25 0.00 2.56 0.00 5.12 0.34 19.62 6.85 35.23 20.96 28.30 11.02 2.51 3.19 34 IG20_AR2 ActiveIntergenicRegion 0 1.36 21.57 5.83 12.86 7.03 38.65 15.84 4.80 39.79 34.20 0.00 6.78 1.36 6.25 0.92 24.20 1.16 43.40 33.37 34.93 12.63 2.36 3.11 35 IG20_SR1 SilentIntergenicRegion 0 2.27 21.23 11.53 25.10 15.09 53.15 16.19 8.39 41.43 42.31 0.11 11.34 3.15 10.16 2.27 21.03 2.00 48.80 30.82 38.94 9.14 4.39 5.64 36 IG20_AR1 ActiveIntergenicRegion 0 2.43 29.52 9.49 21.37 13.46 56.80 18.92 7.25 37.50 42.23 0.26 7.68 2.68 6.37 3.14 20.31 0.00 37.85 22.48 34.99 6.96 3.01 2.57