Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CSK Gene 0 266.98 129.42 226.53 154.69 129.35 171.25 90.79 193.26 133.78 218.01 944.02 174.45 258.11 1223.69 1053.54 676.20 922.41 342.28 222.70 146.92 123.76 96.26 102.38 2 451345 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 439220 Transcript 1 6.59 0.00 0.00 1.86 0.00 2.90 0.00 2.26 0.00 0.00 41.01 0.00 0.00 21.37 8.90 36.40 34.60 3.56 0.00 0.00 2.97 0.00 0.00 4 220003 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 1.24 0.00 0.97 0.00 4.69 2.44 8.70 0.00 6.60 0.00 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 2.47 0.03 0.04 0.99 0.00 44.35 0.04 0.69 0.08 2.21 113.59 13.99 11.54 34.86 32.40 62.92 74.65 25.41 32.25 10.41 19.80 1.25 20.15 6 E1_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 41.06 0.00 4.72 3.15 1.34 134.03 0.00 7.79 0.00 4.45 79.30 95.93 62.43 21.74 11.06 28.73 0.00 3.41 7 E1a_E1b KnownJunction 0 6.59 0.00 0.00 1.86 0.00 2.90 0.00 2.26 0.00 0.00 41.01 0.00 0.00 21.37 8.90 36.40 34.60 3.56 0.00 0.00 2.97 0.00 0.00 8 ER1b ExonRegion 0 15.49 6.00 10.20 2.85 4.40 22.86 5.71 16.69 12.07 26.61 196.39 49.72 68.85 201.86 125.36 89.25 172.26 42.40 31.09 21.86 35.20 7.08 11.20 9 E1_Ab KnownBoundary 0 114.76 36.57 85.60 36.59 65.03 65.13 28.88 110.90 60.91 80.34 398.79 56.27 173.20 656.78 382.22 391.86 515.66 234.05 130.17 100.29 53.75 42.31 46.61 10 ER1c ExonRegion 0 82.50 36.45 111.67 55.96 37.98 55.54 18.82 98.59 65.39 112.88 566.75 68.86 173.71 732.76 594.59 435.65 568.77 274.57 157.49 98.49 93.78 52.57 58.34 11 E1b_E2a KnownJunction 0 84.01 70.18 178.62 98.79 48.22 98.92 31.93 138.46 79.66 168.10 750.87 109.99 276.44 990.76 783.61 578.05 763.16 322.96 265.33 114.60 102.67 74.58 99.96 12 I1_AR7 ActiveIntronRegion 0 33.74 3.77 3.17 9.62 11.88 3.40 9.93 22.22 9.37 8.06 29.28 28.40 18.90 37.16 69.80 73.17 39.13 27.55 58.93 26.03 11.15 3.37 9.85 13 I1_AR10 ActiveIntronRegion 0 67.46 12.96 13.97 14.10 7.58 5.98 9.38 12.77 5.48 11.38 17.80 9.80 9.03 18.42 42.12 31.16 38.35 24.46 13.99 9.04 4.68 2.36 3.74 14 ER2a ExonRegion 0 86.06 86.73 176.41 115.44 71.84 124.77 40.91 167.25 119.07 203.83 1081.19 204.46 227.00 1161.83 881.44 542.82 937.70 299.94 223.06 144.07 126.22 69.82 81.60 15 E2a_E3a KnownJunction 0 112.46 91.23 193.64 129.95 108.32 135.15 63.11 208.98 159.89 225.45 1233.31 201.07 324.00 1303.44 958.65 555.58 1055.54 309.82 254.60 194.56 119.29 78.75 90.48 16 ER3a ExonRegion 0 131.15 86.96 297.64 172.51 80.08 164.59 84.79 226.52 184.12 294.01 1291.11 220.80 317.19 1520.49 1353.94 712.14 1146.97 412.76 271.26 215.71 161.35 104.01 107.50 17 E3a_E4a KnownJunction 0 138.02 78.93 369.65 240.30 64.94 165.70 78.92 294.50 210.62 357.13 1289.64 280.89 358.74 1757.26 1544.72 763.56 1228.89 459.43 290.08 214.63 141.90 82.11 140.76 18 ER4a ExonRegion 0 186.85 97.36 324.72 206.15 119.27 209.64 95.84 258.81 192.72 311.31 1433.30 290.76 412.27 1924.21 1631.04 1016.26 1225.48 505.37 355.89 249.46 169.82 133.55 135.68 19 E4a_E5a KnownJunction 0 237.82 97.55 409.30 262.10 155.69 321.01 106.43 244.76 216.35 362.23 1622.41 287.79 570.90 2035.62 1944.50 1210.20 1469.19 682.65 358.03 253.62 173.90 151.31 170.64 20 E5a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 ER5a ExonRegion 0 211.12 95.07 366.23 207.50 126.43 289.05 88.37 215.41 197.31 326.22 1575.31 302.25 500.37 1933.11 1722.07 1098.39 1430.94 609.99 288.08 247.87 172.58 138.29 162.80 22 ER5b ExonRegion 0 179.60 122.54 334.49 200.76 120.30 207.00 103.21 253.07 188.37 303.74 1346.33 196.26 357.54 1742.38 1567.07 916.19 1324.13 501.98 277.17 248.56 154.46 128.30 129.78 23 E5_Ab KnownBoundary 0 354.43 175.56 399.45 252.78 191.51 256.39 129.13 252.93 211.02 310.39 1301.59 221.47 378.87 1866.28 1843.26 1262.23 1202.71 686.55 318.79 296.51 161.49 161.41 137.35 24 ER5c ExonRegion 0 290.85 129.38 352.78 244.53 131.81 264.69 124.48 253.53 213.13 316.34 1445.34 205.65 303.54 2123.76 1657.14 1221.90 1415.36 667.56 345.55 235.87 172.55 159.18 157.29 25 E5b_E6a KnownJunction 0 397.63 167.01 356.40 280.72 172.16 302.72 145.21 278.19 238.16 365.54 1697.75 177.36 270.60 2063.35 1624.70 1205.24 1672.93 682.99 418.84 218.72 165.25 131.16 189.51 26 ER6a ExonRegion 0 260.20 111.91 255.49 159.33 102.13 212.14 112.95 185.00 177.84 263.30 1284.97 134.40 248.62 1575.69 1207.82 873.30 1285.03 412.66 245.21 210.80 167.51 112.95 145.68 27 E6_Da NovelBoundary 0 184.77 24.01 22.35 20.31 15.53 35.21 7.33 45.06 21.27 38.04 96.55 25.21 34.25 83.00 120.53 98.95 69.28 55.84 34.35 11.82 17.17 13.84 15.79 28 E6a_E7a KnownJunction 0 276.64 126.16 226.96 122.76 84.64 123.39 93.14 152.34 148.41 222.01 908.18 187.11 222.39 1210.38 1176.59 638.04 1043.48 277.70 163.77 231.44 150.67 72.99 72.30 29 ER7a ExonRegion 0 281.24 124.66 264.68 158.28 106.14 235.34 109.75 193.43 156.75 252.81 1337.80 214.57 299.38 1747.28 1437.75 855.25 1334.51 506.45 254.88 223.53 165.98 119.11 124.23 30 E7a_E8a KnownJunction 0 584.84 194.04 421.69 247.55 136.93 274.05 129.35 289.37 190.97 338.11 1508.01 291.09 399.16 2416.46 2008.91 1082.02 1444.04 720.21 413.47 241.22 163.52 198.95 185.41 31 ER8a ExonRegion 0 408.76 142.94 326.87 217.53 117.97 218.46 106.78 238.35 214.05 330.12 1391.17 274.10 317.33 2125.81 1568.56 1122.87 1437.97 605.05 340.87 226.62 183.55 160.54 168.30 32 E8a_E9a KnownJunction 0 495.35 149.32 312.38 243.53 159.85 268.65 105.64 306.49 208.88 361.99 1503.59 215.62 228.56 1925.61 1675.51 1101.25 1279.94 517.59 311.07 233.62 185.58 127.43 131.29 33 ER9a ExonRegion 0 393.60 142.04 277.81 218.62 150.25 266.83 116.62 271.65 196.48 300.41 1467.71 276.04 366.54 1665.63 1438.83 980.61 1345.46 583.30 270.16 244.35 161.65 110.47 147.48 34 E9a_E10a KnownJunction 0 493.35 239.17 333.55 274.09 201.10 292.73 163.05 243.40 219.99 330.97 1563.61 365.22 523.67 1883.88 1524.82 1070.06 1587.19 619.65 313.51 296.38 156.91 148.92 152.29 35 ER10a ExonRegion 0 473.90 189.92 344.68 276.74 157.83 277.89 143.95 275.88 219.88 356.47 1395.45 281.77 347.13 2030.32 1656.69 1117.16 1414.92 538.49 326.89 255.46 167.84 145.28 184.57 36 E10a_E11a KnownJunction 0 825.18 290.41 421.10 318.87 330.56 424.36 243.60 346.95 227.69 360.94 1751.97 359.82 400.14 2392.74 1800.86 1313.07 1572.98 690.86 499.97 300.09 174.46 155.84 219.30 37 ER11a ExonRegion 0 533.08 220.05 369.58 288.05 254.46 291.69 156.57 330.69 202.67 318.41 1615.81 226.70 332.99 1832.44 1641.93 1159.33 1404.24 575.18 360.89 228.87 175.73 142.70 174.27 38 E11a_E12a KnownJunction 0 639.52 276.92 481.27 384.27 265.79 389.09 195.55 440.85 252.25 383.05 1826.04 318.55 347.06 2051.28 1800.24 1444.15 1608.88 682.65 366.98 270.63 238.71 196.87 209.74 39 ER12a ExonRegion 0 557.71 203.97 484.33 325.82 299.13 335.96 185.11 441.89 251.49 423.55 1817.52 226.63 359.35 2142.85 1715.04 1412.44 1595.96 671.01 416.40 242.60 235.11 211.32 190.21 40 E12a_E13a KnownJunction 0 800.96 221.14 563.49 397.88 315.37 324.81 200.63 456.91 282.93 435.92 1811.25 270.69 294.95 2003.72 1738.18 1229.16 1588.40 677.27 327.63 229.46 220.79 108.44 171.07 41 I12 Intron 0 25.78 2.94 11.69 31.87 7.73 9.84 6.56 12.24 12.16 9.88 14.77 1.37 1.77 17.00 28.44 23.32 23.17 24.65 10.52 5.71 4.10 5.59 0.61 42 I12_SR1 SilentIntronRegion 0 25.99 2.96 11.78 32.13 7.80 9.92 6.61 12.34 12.26 9.96 14.89 1.38 1.78 17.14 28.66 23.51 23.36 24.85 10.61 5.76 4.13 5.64 0.61 43 ER13a ExonRegion 0 372.65 200.90 242.85 171.34 190.53 185.71 116.52 219.10 135.73 227.79 793.69 188.90 291.04 1148.95 1082.81 632.32 886.46 293.89 231.51 118.62 120.90 107.49 103.09 44 ER13b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.86 1.24 0.00 0.97 0.00 4.69 2.44 8.70 0.00 6.60 0.00 0.00 0.00 0.00 0.00 0.00 45 IG43_SR1 SilentIntergenicRegion 0 7.82 2.40 3.43 2.94 3.94 2.17 3.68 2.48 3.09 2.75 9.47 3.08 5.45 8.68 23.19 11.72 10.16 11.23 5.45 2.51 1.21 0.02 0.87 46 IG43_AR1 ActiveIntergenicRegion 0 13.91 0.00 7.88 2.73 0.38 0.00 7.57 1.73 3.71 6.06 13.53 11.13 9.38 8.12 22.80 27.60 9.90 23.76 3.64 0.00 2.20 2.08 0.42