Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CATSPER2P1 Gene 0 2.94 2.72 5.77 4.46 3.09 2.95 4.58 3.28 1.98 3.53 3.09 3.75 5.39 5.45 5.59 4.10 4.64 6.36 4.35 5.94 3.75 2.08 3.89 2 429276 Transcript 0 7.23 5.83 15.78 9.55 6.21 6.09 10.03 7.98 5.21 5.88 7.87 7.39 10.96 14.12 9.03 9.13 8.77 15.76 10.43 12.44 7.33 3.54 8.10 3 381680 Transcript 0 1.20 0.94 0.77 0.06 0.95 0.59 1.11 0.07 0.15 0.14 0.68 0.98 0.62 0.92 1.64 1.04 1.02 0.22 0.99 1.48 1.05 1.04 0.90 4 416302 Transcript 0 0.00 0.00 4.88 0.00 0.00 0.00 0.00 0.00 0.00 3.95 2.68 6.30 0.00 2.47 0.00 7.78 0.00 0.00 0.00 0.00 7.72 0.00 0.00 5 439564 Transcript 0 0.28 0.86 0.88 1.86 1.17 1.02 0.98 1.21 0.43 1.44 0.07 0.30 0.37 0.30 0.04 0.48 0.18 0.35 1.13 0.26 0.04 0.36 0.00 6 446479 Transcript 0 2.05 1.97 1.77 1.97 1.04 2.49 2.55 3.50 1.78 1.64 2.25 8.99 11.63 5.95 19.03 2.31 7.33 1.25 2.47 5.36 1.71 4.02 0.57 7 ER1a ExonRegion 0 4.59 2.57 14.42 9.11 3.87 3.98 5.51 7.08 6.30 7.42 8.60 5.23 9.41 8.16 10.08 9.14 14.33 20.28 8.93 12.29 12.41 2.45 17.26 8 E1_Da NovelBoundary 0 41.79 24.07 112.41 50.21 39.56 73.71 60.99 46.04 46.21 83.65 60.86 6.30 31.65 95.24 88.76 49.47 86.21 262.19 22.49 65.83 159.94 50.21 49.94 9 E1a_E3b KnownJunction 0 0.00 0.00 15.29 2.00 0.00 0.00 0.00 4.68 4.66 0.00 2.21 0.00 0.00 7.30 0.00 0.00 0.00 2.11 0.00 0.00 2.72 0.00 0.00 10 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER2b ExonRegion 0 1.52 0.00 1.93 0.00 0.00 0.00 0.00 0.00 0.00 1.26 0.79 0.98 0.00 0.59 0.00 0.54 0.00 0.00 2.15 0.00 3.10 0.00 0.00 12 E2_Da KnownBoundary 0 0.00 0.00 1.21 1.80 0.00 5.56 0.00 2.09 1.45 2.66 0.00 0.00 0.00 2.47 0.00 0.00 4.21 3.90 7.25 0.00 8.59 0.00 0.00 13 E2a_E3b KnownJunction 0 0.00 0.00 4.88 0.00 0.00 0.00 0.00 0.00 0.00 3.95 2.68 6.30 0.00 2.47 0.00 7.78 0.00 0.00 0.00 0.00 7.72 0.00 0.00 14 ER2c ExonRegion 0 0.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E2b_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER3a ExonRegion 0 0.00 0.00 4.60 0.34 0.00 0.00 0.00 0.43 0.93 0.86 0.97 1.08 0.00 2.84 0.00 0.74 0.00 0.46 0.80 0.53 2.75 0.00 0.00 17 ER3b ExonRegion 0 0.00 0.00 18.38 1.36 0.00 0.92 0.00 1.73 3.71 3.44 3.87 4.33 0.00 11.37 0.00 2.97 0.00 1.85 3.19 2.13 11.02 0.00 0.00 18 ER3c ExonRegion 0 0.58 0.00 8.59 0.98 0.95 3.94 3.43 0.53 0.69 1.20 2.04 1.67 0.00 3.38 3.61 1.37 0.00 4.16 0.89 1.43 4.55 0.34 0.00 19 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4a ExonRegion 0 0.35 0.60 18.43 6.19 3.69 0.54 7.76 4.20 1.88 5.29 5.62 5.67 5.63 11.04 3.80 8.15 5.73 13.70 2.80 11.21 9.14 5.58 0.05 21 E4_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E4a_E4b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 ER4b ExonRegion 0 16.60 9.90 28.44 21.45 14.32 14.87 22.89 18.25 7.12 9.91 17.78 15.08 18.84 24.88 11.32 19.29 11.76 32.96 24.60 23.13 8.86 8.44 7.17 25 E4_Ab KnownBoundary 0 3.78 3.35 3.02 7.72 0.00 0.00 12.28 2.55 3.50 0.00 0.00 5.85 0.00 4.94 0.00 0.00 4.77 2.36 4.61 5.69 0.00 0.00 0.00 26 ER4c ExonRegion 0 5.35 7.45 12.51 17.82 12.67 2.70 11.21 8.11 3.00 11.96 5.43 3.63 7.10 20.21 5.72 1.44 4.42 10.16 8.53 12.83 7.71 4.81 3.33 27 E4_Db KnownBoundary 0 3.19 7.70 3.67 5.33 11.71 0.00 0.00 4.89 0.00 0.00 2.11 0.00 19.64 14.77 5.56 0.00 0.00 6.26 0.00 8.12 0.00 3.00 0.00 28 E4b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER4d ExonRegion 0 7.75 10.85 4.99 5.66 6.66 5.53 11.71 1.91 2.78 6.19 2.87 9.26 15.60 16.16 14.71 8.09 9.00 7.71 8.19 14.33 5.32 3.25 7.98 30 E4_Dc NovelBoundary 0 3.56 20.46 1.18 2.96 3.57 7.21 9.67 0.00 1.33 0.00 4.47 12.30 18.67 16.83 0.00 0.00 0.00 3.69 0.00 8.50 0.00 0.00 3.33 31 ER5a ExonRegion 0 0.00 0.00 0.00 0.60 0.60 4.42 0.46 1.39 0.00 1.01 0.50 1.28 2.06 1.68 1.79 0.88 0.00 0.00 0.00 3.14 0.00 0.61 0.00 32 E5_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 E5a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER5b ExonRegion 0 0.00 0.00 0.00 0.00 2.61 2.61 2.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35 E5_Db KnownBoundary 0 3.78 24.47 7.01 36.89 26.49 26.23 30.52 56.85 26.07 8.33 4.69 18.46 6.82 2.47 0.00 0.00 0.00 6.05 12.42 29.21 0.00 5.20 4.18 36 ER5c ExonRegion 0 0.66 0.00 0.00 0.00 0.14 0.15 0.22 0.00 0.00 0.00 0.00 0.00 0.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 E5_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER5d ExonRegion 0 0.00 0.00 0.11 0.11 0.00 0.00 0.00 0.06 0.06 0.04 0.00 0.00 0.33 0.38 0.00 0.06 0.00 0.05 0.00 0.16 0.00 0.00 0.00 39 E5_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 E5c_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER5e ExonRegion 0 5.86 5.63 0.00 0.00 5.56 3.39 6.43 0.00 0.00 0.00 3.12 4.82 3.44 2.68 9.85 5.49 6.09 0.85 5.15 8.35 3.56 6.25 5.42 42 E6_Aa NovelBoundary 0 0.00 13.22 10.11 23.37 3.31 5.74 0.00 13.64 1.79 6.98 0.00 0.00 0.00 0.00 0.00 4.36 0.00 10.28 8.00 5.82 0.00 0.00 0.00 43 ER6a ExonRegion 0 0.91 4.36 6.12 7.65 5.73 7.86 3.40 6.62 5.40 7.28 0.00 1.53 1.62 1.08 0.00 1.20 1.41 3.48 8.19 3.43 0.00 0.00 0.00 44 E6_Da NovelBoundary 0 14.37 0.00 11.21 26.64 11.54 11.53 0.00 10.02 7.81 5.48 0.00 0.00 6.82 0.00 0.00 7.35 4.21 6.59 0.00 2.62 0.00 0.00 4.01 45 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 E7_Aa NovelBoundary 0 13.93 13.75 5.50 8.19 16.55 0.00 0.00 4.81 6.77 2.71 0.00 0.00 0.00 0.00 0.00 3.85 0.00 4.68 4.71 2.68 0.00 0.00 0.00 47 ER7a ExonRegion 0 0.00 0.58 0.03 0.59 0.00 0.54 1.09 0.07 0.03 0.47 0.00 0.00 0.00 0.39 0.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 49 E8_Aa NovelBoundary 0 3.63 0.00 4.97 13.82 3.57 0.00 1.81 16.76 7.00 3.73 0.00 0.00 0.00 2.24 6.30 4.36 9.07 4.77 0.00 0.00 2.97 0.00 3.50 50 ER8a ExonRegion 0 2.16 3.11 3.65 7.28 1.36 1.83 2.11 5.13 0.00 6.12 0.99 1.82 0.00 1.84 0.00 4.55 0.00 0.00 3.22 0.00 0.00 0.00 0.00 51 E8_Da NovelBoundary 0 3.78 5.79 3.13 13.95 4.33 0.00 6.62 6.78 7.58 5.72 0.00 0.00 0.00 0.00 0.00 4.02 4.77 0.00 25.98 6.46 0.00 0.00 4.35 52 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 53 ER9a ExonRegion 0 0.00 1.79 0.04 0.00 4.71 0.00 5.80 0.00 0.00 0.00 0.00 0.00 0.00 1.18 0.00 0.00 0.00 0.00 0.05 0.00 0.00 5.42 0.00 54 E9_Da NovelBoundary 0 0.00 19.73 4.44 4.66 0.00 19.99 5.83 1.97 1.45 9.16 0.00 0.00 6.82 0.00 4.45 0.00 0.00 0.00 6.96 0.00 0.00 0.00 0.00 55 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56 ER10a ExonRegion 0 0.00 1.48 0.89 4.52 1.12 0.89 2.26 1.87 0.45 3.75 0.00 0.87 3.95 0.00 0.00 1.44 0.00 0.45 0.06 0.52 0.54 0.02 0.00 57 E10a_E11a KnownJunction 0 0.00 0.00 0.00 0.00 3.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 58 E11_Aa NovelBoundary 0 0.00 6.12 18.36 17.11 12.82 0.00 0.00 2.38 5.82 3.65 0.00 0.00 0.00 0.00 0.00 3.50 0.00 6.18 0.00 0.00 3.09 0.00 0.00 59 ER11a ExonRegion 0 1.16 1.60 2.48 7.82 0.89 4.19 0.00 4.40 0.53 3.93 0.00 0.31 0.00 0.00 0.00 0.00 1.26 1.28 5.46 0.00 0.00 0.00 0.00 60 E11_Ab KnownBoundary 0 33.41 40.26 23.65 94.43 45.67 30.61 24.38 55.78 16.29 23.80 15.32 0.00 0.00 5.18 4.94 7.52 8.88 17.33 12.80 8.25 0.00 3.12 7.43 61 ER11b ExonRegion 0 1.36 0.30 3.70 4.76 3.33 0.85 2.20 4.88 1.35 5.72 0.00 1.69 3.20 1.11 1.20 1.23 0.94 2.99 1.99 0.88 0.00 0.00 0.00 62 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 ER12a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.16 0.00 0.14 0.00 0.00 0.00 0.00 0.00 0.00 2.89 0.00 0.00 0.00 0.00 0.00 0.00 64 E12_Da KnownBoundary 0 33.41 16.18 8.69 30.57 8.40 44.92 28.62 22.71 10.91 8.06 19.16 5.70 7.95 2.47 20.40 4.10 9.54 2.32 0.00 12.08 0.00 5.08 0.00 65 ER12b ExonRegion 0 2.05 1.97 1.77 1.97 1.04 2.49 2.55 3.50 1.78 1.64 2.25 8.99 11.63 5.95 19.03 2.31 7.33 1.25 2.47 5.36 1.71 4.02 0.57