Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C15orf61 Gene 0 4.08 16.02 44.51 34.79 10.43 25.93 7.66 21.10 19.79 27.06 23.68 3.13 4.02 23.68 52.96 6.55 12.61 12.84 15.43 30.25 21.78 21.75 11.68 2 342683 Transcript 0 5.26 16.41 82.44 43.94 11.19 40.82 16.79 31.18 28.80 39.55 41.86 3.35 7.02 41.19 85.73 8.32 20.70 16.16 15.44 43.73 37.68 29.40 17.85 3 ER1a ExonRegion 0 4.46 14.24 63.18 23.70 7.39 35.00 11.72 20.88 14.57 31.73 48.78 0.38 3.50 44.79 104.85 12.89 24.76 30.96 20.42 47.79 48.65 26.32 23.90 4 E1_Da NovelBoundary 0 0.00 5.72 26.82 19.11 3.40 17.55 12.01 15.69 10.39 26.73 17.32 6.00 0.00 19.66 39.43 10.77 30.86 26.28 24.57 50.37 31.51 13.84 11.87 5 E1a_E2a KnownJunction 0 7.41 18.15 148.31 68.16 14.35 65.76 32.86 51.47 49.62 62.02 64.81 5.25 13.31 64.92 123.49 8.46 30.39 13.10 12.80 61.30 55.11 42.25 23.65 6 I1 Intron 0 6.00 27.48 13.89 55.71 14.77 24.67 14.11 11.29 14.30 14.60 9.20 8.73 14.47 9.08 8.75 4.34 3.17 12.66 12.26 21.16 3.38 7.70 5.28 7 I1_AR1 ActiveIntronRegion 0 5.56 2.44 6.11 3.51 1.25 4.01 5.58 1.38 2.77 5.81 3.89 1.33 5.07 12.86 13.58 2.10 4.49 4.78 3.82 13.36 5.29 7.20 4.86 8 I1_AR2 ActiveIntronRegion 0 5.52 11.78 9.31 27.22 7.85 16.20 10.13 11.29 15.32 17.64 16.54 8.29 33.76 17.37 13.28 13.03 5.34 39.09 15.00 28.04 9.08 8.52 12.62 9 I1_SR1 SilentIntronRegion 0 6.88 32.38 16.55 60.37 22.14 37.39 21.27 15.38 16.90 17.18 21.51 18.88 19.57 14.41 10.69 5.94 6.01 18.48 15.27 30.65 6.01 12.48 6.92 10 I1_AR3 ActiveIntronRegion 0 6.40 27.98 12.88 57.22 14.64 21.61 14.74 12.59 18.92 17.60 8.38 11.87 12.50 6.99 10.12 2.24 2.65 5.46 10.72 22.92 2.52 8.57 3.39 11 I1_SR2 SilentIntronRegion 0 10.39 60.06 15.58 78.37 14.92 19.49 13.93 15.90 15.69 16.58 3.59 12.71 15.78 4.24 5.50 3.91 2.37 4.62 8.50 21.98 1.07 7.24 3.49 12 I1_AR4 ActiveIntronRegion 0 5.67 33.26 13.72 64.53 14.35 36.07 16.12 6.43 9.96 9.79 3.18 1.54 5.84 7.27 3.65 1.49 1.55 9.23 13.14 15.52 1.35 7.38 4.42 13 I1_SR3 SilentIntronRegion 0 3.22 14.81 15.32 52.81 15.09 25.10 10.58 6.91 9.63 9.12 3.02 1.76 4.24 6.35 6.55 1.79 2.03 5.16 11.65 8.96 0.97 3.18 3.12 14 I1_AR5 ActiveIntronRegion 0 4.54 20.38 15.11 65.05 14.95 12.63 11.83 13.45 15.28 16.92 5.71 4.31 11.79 3.12 10.85 1.84 0.57 6.18 12.28 23.35 1.41 6.10 2.04 15 E2_Aa NovelBoundary 0 10.89 6.18 50.32 125.69 4.24 0.00 6.18 14.62 24.88 19.21 2.11 5.85 42.21 0.00 26.33 0.00 0.00 3.52 13.08 12.02 0.00 5.45 0.00 16 ER2a ExonRegion 0 3.91 16.84 35.84 39.95 11.85 21.71 5.78 21.20 22.22 24.88 12.00 4.41 4.26 13.86 28.84 3.61 6.96 4.42 13.11 22.10 9.29 19.62 6.00 17 IG22_AR1 ActiveIntergenicRegion 0 0.00 18.60 7.30 10.40 1.35 17.66 5.87 5.79 8.29 9.14 0.00 2.51 0.00 1.37 0.00 0.00 0.00 0.00 3.52 7.12 0.00 2.24 0.00 18 IG22_SR1 SilentIntergenicRegion 0 1.54 16.15 11.90 16.87 6.91 20.37 6.60 8.37 10.53 12.31 0.79 3.57 0.75 1.60 0.03 0.00 0.64 0.00 5.51 9.07 0.00 1.21 0.57 19 IG22_AR2 ActiveIntergenicRegion 0 4.58 16.91 13.47 34.42 10.05 19.91 5.68 7.98 14.70 15.82 0.15 2.13 0.99 0.79 0.34 0.42 0.28 1.03 8.13 8.46 0.00 2.38 1.26 20 IG22_SR2 SilentIntergenicRegion 0 5.87 20.68 20.70 29.49 9.16 24.96 8.03 12.21 12.64 14.21 0.76 3.39 0.62 0.96 1.35 1.31 0.00 1.58 8.52 12.46 0.00 3.76 0.00 21 IG22_AR3 ActiveIntergenicRegion 0 5.15 24.54 11.37 23.41 9.32 22.35 5.24 15.33 8.29 10.70 0.00 4.38 2.25 0.19 0.00 0.00 0.00 1.34 6.00 5.21 0.64 2.13 0.86 22 IG22_AR6 ActiveIntergenicRegion 0 1.93 5.61 12.57 18.58 10.23 2.76 17.34 12.73 4.52 12.62 2.58 12.69 9.59 3.13 12.34 4.21 0.71 2.49 2.86 3.28 1.10 4.65 0.00 23 IG22_SR6 SilentIntergenicRegion 0 2.72 6.68 4.97 4.58 20.13 0.00 26.42 6.63 1.94 4.14 1.96 0.45 2.94 5.55 6.37 3.81 0.74 0.99 2.04 0.73 0.03 3.02 0.00 24 IG22_AR8 ActiveIntergenicRegion 0 8.64 7.50 15.34 19.93 6.82 3.62 15.03 8.87 3.37 14.67 5.58 17.26 10.84 10.19 12.09 6.04 7.50 5.72 9.69 5.74 3.71 3.04 1.08