Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SHC4 Gene 0 1.52 2.00 2.31 1.55 1.43 5.33 1.00 1.21 9.73 1.12 0.57 1.98 0.79 0.31 0.34 0.26 0.65 2.50 1.18 10.67 3.37 21.83 6.48 2 332408 Transcript 0 1.53 1.13 1.47 0.20 0.00 3.37 0.13 0.25 8.08 0.62 0.25 0.33 0.21 0.20 0.32 0.77 0.00 2.30 3.32 12.86 3.47 20.32 6.52 3 396535 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.96 0.00 0.00 0.00 0.89 0.31 0.00 0.00 0.00 0.00 0.00 0.49 0.00 0.00 0.00 4 ER1a ExonRegion 0 0.36 0.41 1.47 0.10 0.00 2.55 0.00 0.00 4.19 0.17 0.00 0.18 0.19 0.07 0.00 0.30 0.00 4.76 0.32 8.69 3.45 11.83 6.58 5 E1a_E2a KnownJunction 0 3.63 0.00 0.00 0.00 0.00 5.11 0.00 0.00 8.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.14 5.87 14.02 4.35 6 ER2a ExonRegion 0 0.98 0.11 0.00 0.00 0.00 6.97 0.00 0.00 9.99 0.00 1.39 0.00 0.00 0.00 0.00 0.88 0.00 1.74 4.85 15.88 3.91 24.71 12.57 7 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.56 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 1.95 12.99 20.52 3.15 19.84 7.34 8 ER3a ExonRegion 0 0.00 2.48 0.77 0.00 0.00 3.35 0.08 0.05 7.78 0.95 0.00 0.00 0.07 0.00 0.18 1.39 0.00 4.62 3.63 14.46 4.24 24.84 4.18 9 E3a_E4a KnownJunction 0 0.00 3.35 1.83 0.00 0.00 2.38 0.00 0.00 4.43 1.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.89 4.80 10.99 6.12 28.84 10.24 10 ER4a ExonRegion 0 0.62 3.80 5.47 1.73 0.00 9.96 1.08 2.16 14.63 1.31 0.82 2.78 1.60 1.71 2.66 0.00 0.03 2.76 3.32 20.60 1.34 24.98 9.81 11 E4a_E6a KnownJunction 0 7.11 0.00 3.67 0.00 0.00 0.00 0.00 0.00 12.44 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.47 3.15 33.80 3.59 12 I4 Intron 0 96.88 232.79 247.68 234.42 207.34 202.70 184.79 213.73 194.32 175.88 152.98 283.88 138.64 118.57 156.25 61.27 78.13 37.88 77.41 142.45 43.04 303.46 71.50 13 I4_SR1 SilentIntronRegion 0 4.07 5.78 3.32 5.05 4.89 2.56 3.81 11.89 19.58 6.92 5.21 2.31 1.31 2.99 2.83 1.45 2.28 4.10 3.35 8.52 0.73 1.44 0.60 14 I4_AR1 ActiveIntronRegion 0 2.58 7.43 3.04 3.90 5.02 3.38 3.28 10.74 16.44 6.90 4.72 6.60 3.58 3.08 0.50 1.21 1.88 3.35 2.59 7.49 0.36 3.21 0.48 15 I4_AR2 ActiveIntronRegion 0 333.90 806.71 866.44 815.58 719.96 708.85 642.74 729.22 642.17 604.31 526.81 993.12 484.75 410.98 546.79 213.18 270.22 124.75 265.11 482.59 150.15 1066.86 250.64 16 Ix Intron 0 12.52 34.57 0.00 0.00 31.64 63.70 27.40 0.00 0.00 0.00 158.58 151.34 178.02 304.86 350.17 369.06 100.03 45.07 193.11 176.13 200.38 135.55 347.29 17 Ix_AR1 ActiveIntronRegion 0 12.86 35.51 0.00 0.00 32.51 65.44 28.18 0.00 0.00 0.00 163.14 155.80 183.05 313.58 360.15 379.37 102.97 46.36 198.44 181.14 205.96 139.10 357.00 18 E5_Aa NovelBoundary 0 14.22 12.96 60.38 72.58 0.00 25.67 17.09 131.56 65.45 84.10 4.42 0.00 7.47 5.12 6.30 0.00 17.95 70.72 16.28 49.73 26.63 26.39 18.27 19 ER5a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.73 0.00 0.00 0.00 1.77 0.61 0.00 0.00 0.00 0.00 0.00 0.98 0.00 0.00 0.00 20 E5_Da NovelBoundary 0 3.78 10.00 7.27 22.74 3.90 0.00 17.36 35.94 26.74 17.78 0.00 0.00 0.00 0.00 0.00 0.00 4.49 4.73 0.00 2.88 0.00 3.12 0.00 21 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER6a ExonRegion 0 7.80 0.00 1.41 0.05 0.00 1.39 0.00 0.00 9.74 1.64 0.97 3.69 0.00 0.00 0.00 0.00 4.71 1.57 4.37 15.48 7.71 16.21 10.39 23 E6a_E7a KnownJunction 0 3.78 0.00 1.71 0.00 0.00 2.33 0.00 0.00 8.04 1.67 2.68 0.00 0.00 0.00 0.00 0.00 4.77 2.57 8.47 20.07 5.81 15.19 16.90 24 ER7a ExonRegion 0 0.85 0.51 6.39 1.36 2.57 3.31 0.00 0.00 13.11 1.63 0.89 0.25 0.00 0.09 0.00 2.40 2.48 2.95 1.72 18.09 2.80 14.34 14.68 25 E7a_E8a KnownJunction 0 0.00 2.89 8.46 1.76 8.57 10.68 0.00 0.00 23.47 1.67 0.00 0.00 0.00 0.00 0.00 0.00 4.30 0.00 0.00 27.04 5.25 24.06 11.10 26 ER8a ExonRegion 0 0.87 5.64 2.59 1.26 5.31 7.76 2.11 0.00 13.35 0.94 2.23 7.61 0.00 1.53 0.00 0.22 2.32 1.65 2.18 17.23 7.84 26.63 12.01 27 E8a_E9a KnownJunction 0 0.00 0.00 2.75 1.60 12.90 19.31 6.58 0.00 21.09 2.50 2.16 5.85 0.00 0.00 0.00 0.00 0.00 1.87 4.52 28.00 9.02 24.13 13.83 28 ER9a ExonRegion 0 0.98 1.00 2.22 3.72 1.23 7.09 0.83 0.76 14.50 1.10 3.53 9.31 1.96 0.74 0.00 0.00 0.00 2.12 4.50 26.15 9.07 36.72 12.58 29 E9a_E10a KnownJunction 0 3.78 6.12 1.83 1.80 4.16 5.39 0.00 0.00 12.21 0.00 5.37 0.00 0.00 0.00 0.00 0.00 0.00 10.11 4.80 17.45 0.00 47.70 4.27 30 ER10a ExonRegion 0 2.50 6.20 1.63 5.34 4.69 3.10 1.09 1.64 8.89 0.53 3.11 5.96 0.00 0.56 0.00 0.00 0.00 8.15 2.82 20.23 3.00 38.77 11.46 31 E10a_E11a KnownJunction 0 0.00 3.35 1.83 6.29 7.64 0.00 0.00 2.01 9.72 1.58 1.95 0.00 0.00 2.47 0.00 0.00 0.00 0.00 4.80 18.15 3.15 49.29 0.00 32 ER11a ExonRegion 0 0.61 2.95 1.63 4.22 1.55 5.42 0.76 0.32 7.96 0.79 0.61 4.31 0.00 0.88 0.00 0.84 0.94 4.48 2.27 17.20 6.83 27.05 12.22 33 E11a_E12a KnownJunction 0 7.26 3.35 3.43 5.23 3.65 8.52 0.00 1.89 6.11 0.00 0.00 0.00 0.00 4.83 0.00 0.00 0.00 2.20 0.00 18.02 5.56 27.92 12.89 34 ER12a ExonRegion 0 2.87 1.46 1.78 4.24 1.03 3.35 1.60 1.49 9.95 2.13 0.02 2.32 0.00 0.88 0.00 0.60 3.96 3.44 1.28 13.99 6.84 26.87 8.32 35 E12a_E13a KnownJunction 0 3.26 0.00 3.08 3.76 4.33 2.78 0.00 3.53 23.03 4.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.80 0.00 10.87 5.44 45.07 16.30 36 ER13a ExonRegion 0 2.04 2.56 2.78 1.63 2.03 6.67 1.47 1.97 11.83 1.52 0.49 1.78 1.15 0.16 0.52 0.13 0.49 1.31 0.82 8.40 2.21 24.38 4.71 37 ER13b ExonRegion 0 1.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00