Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	RFX7	Gene	0	2.66	9.41	2.46	8.18	4.00	16.72	11.46	6.90	13.37	9.11	14.00	25.29	25.35	23.65	4.23	22.34	29.00	37.86	12.37	29.18	20.10	10.36	11.40
2	423270	Transcript	0	10.29	46.10	7.93	21.86	12.40	46.91	49.30	11.45	33.39	23.92	43.57	40.94	19.36	47.95	10.15	37.33	45.75	101.11	41.88	75.70	42.43	23.33	32.31
3	317318	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	422057	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	IG22_AR1	ActiveIntergenicRegion	0	0.00	0.36	1.73	0.35	0.63	3.64	2.90	4.90	6.96	6.07	14.16	2.54	13.93	21.15	7.11	10.34	18.62	12.71	7.29	18.89	20.82	4.58	6.45
6	ER1a	ExonRegion	0	4.61	13.67	2.17	5.62	3.57	12.79	16.89	6.04	9.67	8.02	25.73	15.06	22.66	51.06	12.00	34.26	52.53	41.68	26.85	34.69	41.58	10.95	7.24
7	E1_Da	NovelBoundary	0	0.00	0.00	0.00	2.06	3.82	0.00	6.05	6.90	3.12	0.00	2.63	0.00	6.82	2.12	6.18	0.00	3.83	6.76	13.46	3.13	8.90	0.00	0.00
8	E1a_E2a	KnownJunction	0	15.41	33.61	4.79	23.14	3.57	38.50	30.43	7.89	19.56	20.36	78.02	35.26	45.13	98.95	19.53	62.80	144.65	94.72	52.71	75.68	96.62	29.45	11.18
9	I1	Intron	0	10.70	9.56	5.28	18.98	6.66	4.50	12.64	8.22	7.05	5.35	2.41	19.31	21.25	1.44	5.59	11.02	8.94	4.77	6.65	8.70	1.55	0.80	2.69
10	I1_SR1	SilentIntronRegion	0	29.52	18.38	4.50	25.58	11.28	9.12	14.00	15.82	13.73	9.52	4.35	28.83	32.58	2.81	9.65	15.18	8.73	4.82	9.46	8.73	0.70	1.84	3.20
11	I1_AR1	ActiveIntronRegion	0	148.46	70.32	17.25	100.13	49.91	19.82	29.35	58.10	31.89	24.08	5.23	45.83	50.48	2.11	30.40	27.59	9.96	12.27	27.65	12.32	2.83	3.60	5.25
12	I1_SR2	SilentIntronRegion	0	8.89	10.97	7.29	32.03	10.01	8.48	17.62	14.70	12.90	7.36	5.17	24.93	28.62	2.41	8.94	18.87	16.36	8.67	10.57	11.99	2.12	1.53	4.58
13	I1_AR2	ActiveIntronRegion	0	5.56	9.39	4.30	19.10	6.68	6.82	18.29	7.43	9.73	4.37	7.35	33.48	45.12	1.54	4.85	16.07	8.81	4.75	10.93	14.26	1.25	1.30	3.87
14	I1_SR3	SilentIntronRegion	0	4.33	4.10	2.87	25.55	5.83	10.11	26.08	7.00	9.95	5.63	4.45	36.71	35.52	3.92	6.38	13.01	16.43	4.89	7.97	14.79	2.09	0.87	4.48
15	I1_AR3	ActiveIntronRegion	0	6.64	4.63	6.62	18.41	8.12	7.56	20.16	4.74	10.24	3.44	7.70	21.32	35.19	1.89	7.73	18.17	15.84	11.05	6.19	10.60	0.44	0.21	2.89
16	I1_SR4	SilentIntronRegion	0	5.27	8.21	5.42	17.13	3.94	2.75	14.49	4.01	5.58	4.58	2.06	18.60	22.27	1.49	3.91	9.87	9.89	4.31	6.60	11.10	1.77	0.45	3.32
17	I1_AR4	ActiveIntronRegion	0	15.46	23.24	28.86	47.00	15.71	7.16	15.08	23.89	21.34	27.48	1.96	22.53	21.28	1.12	12.15	9.02	5.64	4.66	8.21	12.65	0.00	0.27	2.77
18	I1_AR5	ActiveIntronRegion	0	17.40	30.23	29.90	39.10	17.37	6.29	12.53	17.39	14.40	18.37	2.12	11.80	15.39	1.40	14.88	10.87	8.91	12.40	12.28	12.63	0.77	0.00	5.81
19	I1_SR5	SilentIntronRegion	0	8.31	7.25	5.96	14.18	5.45	2.70	11.09	5.25	3.57	3.90	1.36	13.50	13.76	0.80	5.62	7.56	5.73	2.73	4.73	5.90	0.83	0.60	1.47
20	I1_AR9	ActiveIntronRegion	0	4.46	6.94	6.24	17.77	5.70	7.50	14.33	8.06	4.23	3.74	0.65	14.75	12.26	0.46	7.86	7.14	9.04	2.70	11.08	8.42	0.37	0.16	2.01
21	I1_SR6	SilentIntronRegion	0	1.57	3.02	2.00	6.51	1.74	1.54	7.25	2.77	1.94	1.51	0.92	14.88	16.26	0.89	2.16	8.58	7.74	4.03	3.55	6.08	2.28	0.28	1.74
22	I1_AR11	ActiveIntronRegion	0	5.94	5.03	3.31	13.74	6.62	3.03	9.61	8.08	8.20	5.64	0.00	25.35	7.92	1.55	2.45	1.47	2.72	1.67	3.68	9.12	0.73	0.34	0.97
23	I1_SR8	SilentIntronRegion	0	8.92	11.81	4.08	15.89	7.02	3.08	10.93	6.53	5.54	6.47	1.08	13.80	9.73	0.49	2.94	6.26	2.98	3.25	4.38	7.04	0.66	0.54	1.64
24	E2_Aa	NovelBoundary	0	0.00	10.00	4.55	7.62	4.33	0.00	25.04	16.47	0.00	2.04	2.37	7.20	6.82	0.00	0.00	0.00	4.49	0.00	0.00	5.56	0.00	3.12	0.00
25	ER2a	ExonRegion	0	10.08	42.94	10.67	33.19	10.23	43.09	47.43	13.83	34.69	37.38	72.77	37.18	39.59	88.94	15.36	86.02	121.65	134.40	81.04	113.33	76.55	25.62	26.43
26	E2_Da	NovelBoundary	0	0.00	0.00	1.83	3.63	4.33	0.00	3.62	3.78	1.62	0.00	2.42	18.16	6.82	0.00	0.00	3.59	8.79	0.00	4.71	3.13	0.00	0.00	4.27
27	E2a_E3a	KnownJunction	0	7.56	59.73	14.46	30.23	20.97	33.73	63.77	15.16	36.60	43.25	59.70	68.72	53.89	102.89	17.80	87.93	88.64	108.86	98.54	145.86	64.68	14.08	51.56
28	I2_AR2	ActiveIntronRegion	0	35.59	14.30	11.33	20.44	26.55	4.04	23.54	14.20	4.57	6.82	0.80	6.53	7.26	0.75	7.13	9.02	8.64	3.55	12.73	5.87	0.30	0.57	3.64
29	I2_AR3	ActiveIntronRegion	0	4.44	11.18	1.97	10.11	2.23	1.53	16.00	4.13	2.16	3.14	1.93	11.49	16.42	1.31	0.89	0.21	4.22	1.69	4.42	6.71	0.00	0.00	0.00
30	I2_AR4	ActiveIntronRegion	0	4.31	29.40	3.71	10.72	5.37	1.63	10.51	7.24	6.11	3.22	1.29	18.65	20.86	1.49	2.30	0.00	3.34	1.08	3.42	4.26	0.84	0.00	0.00
31	I2_AR5	ActiveIntronRegion	0	6.35	13.15	7.43	17.08	2.68	0.00	10.50	5.30	5.85	6.65	1.55	15.01	28.45	3.25	0.77	0.00	5.28	0.00	1.49	6.10	1.91	0.00	0.59
32	I2_AR6	ActiveIntronRegion	0	5.50	13.50	6.72	23.11	2.14	3.37	5.14	3.11	6.18	1.56	1.93	42.08	41.08	1.62	0.00	0.00	6.87	0.89	1.91	7.74	0.00	0.00	2.94
33	I2_AR7	ActiveIntronRegion	0	1.00	3.38	0.43	3.61	0.63	0.43	10.21	2.44	2.18	2.23	1.38	3.32	5.69	0.71	0.73	3.88	16.44	2.51	3.78	8.08	4.70	0.25	0.35
34	I2_AR8	ActiveIntronRegion	0	4.23	6.86	1.15	0.00	4.85	0.00	14.23	1.73	4.82	1.00	0.00	7.71	27.26	0.00	2.90	2.23	3.71	2.66	1.99	3.46	0.00	0.00	2.94
35	ER3a	ExonRegion	0	6.12	31.14	8.09	38.39	14.73	52.03	62.42	30.45	58.84	42.95	58.20	81.58	75.72	110.07	20.62	80.43	131.80	158.66	52.65	140.40	88.79	16.97	50.88
36	E3_Da	NovelBoundary	0	0.00	3.35	3.37	3.63	0.00	0.00	10.11	2.51	1.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	17.67	4.31	0.00	6.33	2.90	0.00	3.24
37	E3a_E4a	KnownJunction	0	13.56	18.62	7.51	47.75	25.04	55.14	57.99	38.40	72.89	38.84	57.91	91.83	100.32	135.21	19.53	109.12	171.29	180.24	74.45	181.84	75.31	24.74	59.58
38	I3	Intron	0	1.39	3.20	6.14	5.42	3.91	4.36	8.66	3.39	7.33	1.50	1.63	6.96	5.14	3.23	1.59	4.45	5.55	3.12	2.10	7.63	3.46	8.08	2.04
39	I3_SR2	SilentIntronRegion	0	1.40	3.56	7.19	6.20	4.09	4.77	8.44	3.78	8.34	1.48	1.76	8.10	6.14	3.93	1.65	5.12	5.79	3.31	2.11	8.17	4.17	9.54	2.22
40	E4_Aa	NovelBoundary	0	10.37	0.00	12.36	7.09	4.33	9.99	18.28	3.70	11.95	7.76	2.16	24.91	0.00	7.18	0.00	0.00	8.51	17.24	4.80	20.01	5.07	9.00	0.00
41	ER4a	ExonRegion	0	12.73	35.76	18.73	56.41	17.75	70.94	68.00	33.56	81.22	47.13	80.74	103.27	85.34	129.93	28.23	112.72	169.15	197.77	82.25	166.87	86.18	55.92	63.17
42	E4_Da	NovelBoundary	0	9.48	5.53	8.10	17.78	0.00	0.00	9.76	4.07	7.93	6.21	5.37	0.00	20.45	2.47	0.00	4.36	12.16	0.00	11.48	18.34	3.15	0.00	7.85
43	E4a_E5a	KnownJunction	0	10.67	41.70	17.18	35.26	15.79	58.83	57.15	39.80	78.33	31.03	73.70	112.54	118.50	83.58	27.32	93.82	123.24	144.55	49.22	184.98	84.88	60.13	45.16
44	I4_SR1	SilentIntronRegion	0	3.18	8.09	1.25	10.20	4.73	0.97	12.99	2.88	5.52	5.77	0.40	14.02	14.07	1.34	2.46	4.59	8.65	1.65	3.94	8.84	0.97	0.37	2.82
45	I4_AR1	ActiveIntronRegion	0	0.69	11.22	0.76	11.32	2.61	0.60	6.43	6.14	7.78	4.89	0.41	20.60	28.23	1.77	4.82	7.25	11.10	4.40	1.03	6.21	1.43	2.03	2.02
46	I4_SR2	SilentIntronRegion	0	2.75	4.62	0.00	5.94	2.61	0.60	16.34	3.35	2.39	1.11	0.00	12.74	23.21	0.87	2.94	4.83	13.94	1.80	4.14	4.84	0.00	2.03	0.00
47	I4_AR2	ActiveIntronRegion	0	8.57	10.00	2.91	13.46	3.69	3.33	25.28	4.13	7.86	3.82	1.65	11.55	17.20	2.60	4.00	4.45	8.12	3.24	9.20	11.37	3.77	0.45	2.20
48	I4_SR3	SilentIntronRegion	0	5.90	8.93	5.50	17.12	4.95	1.91	10.38	9.61	8.23	5.92	0.92	9.35	8.61	1.13	2.73	5.13	4.98	3.55	3.51	7.59	1.50	0.72	1.78
49	E5_Aa	NovelBoundary	0	13.04	12.76	3.99	4.56	0.00	4.94	4.50	10.88	8.74	11.55	0.00	0.00	13.47	0.00	9.64	8.12	0.00	14.84	4.80	27.48	5.56	3.12	4.18
50	ER5a	ExonRegion	0	19.79	52.13	18.50	46.83	25.71	115.17	73.24	45.37	90.31	41.30	80.49	155.08	110.08	130.97	22.39	107.73	152.83	196.37	61.18	163.03	93.46	49.36	54.99
51	E5a_E6a	KnownJunction	0	7.33	33.81	13.45	24.37	11.04	78.31	42.57	18.98	38.57	21.33	40.12	31.51	6.82	39.85	10.26	82.88	107.81	77.97	29.65	67.43	32.06	16.17	24.41
52	E5b_E6b	KnownJunction	0	14.22	57.62	9.73	21.91	19.44	49.80	62.84	10.80	39.61	14.59	45.59	42.91	19.97	41.50	0.00	30.08	41.98	104.30	61.46	84.37	49.61	34.17	35.25
53	ER5b	ExonRegion	0	6.35	34.57	6.13	21.81	5.35	44.01	35.75	12.10	27.17	33.26	41.56	38.97	18.76	54.41	20.31	44.58	49.51	97.93	22.30	67.02	35.26	12.50	29.37
54	I5	Intron	0	13.65	10.33	5.89	18.01	18.55	4.36	10.62	6.54	6.01	6.34	0.86	10.05	10.76	6.00	6.70	11.02	3.46	2.86	4.11	4.20	1.33	0.50	2.01
55	I5_SR1	SilentIntronRegion	0	13.69	10.35	5.90	18.06	18.60	4.37	10.65	6.56	6.03	6.35	0.86	10.08	10.78	6.01	6.72	11.05	3.47	2.87	4.12	4.21	1.34	0.51	2.02
56	ER6a	ExonRegion	0	21.17	71.85	20.83	48.16	26.76	105.75	78.56	34.57	76.99	41.29	79.89	152.97	95.36	118.02	13.54	113.93	127.63	169.99	73.26	121.28	71.99	53.48	46.01
57	ER6b	ExonRegion	0	18.89	72.64	19.11	41.92	36.84	104.03	75.08	37.35	93.37	47.79	90.02	222.12	122.86	154.17	26.01	133.85	174.63	234.33	89.46	178.05	118.95	64.16	49.28
58	E6_Da	NovelBoundary	0	3.26	0.00	4.88	9.86	0.00	0.00	1.85	5.75	4.31	1.10	0.00	6.30	6.82	0.00	0.00	0.00	13.09	0.00	4.80	9.20	0.00	0.00	0.00
59	E6a_E7a	KnownJunction	0	6.96	52.36	16.50	35.49	7.89	107.78	57.72	39.72	85.01	37.77	64.49	162.80	120.12	143.86	15.82	112.53	139.78	257.92	39.25	186.45	124.98	48.99	53.78
60	ER7a	ExonRegion	0	11.23	49.26	14.89	41.73	22.81	97.62	65.14	35.77	70.70	52.86	83.13	181.78	129.38	142.60	23.22	149.13	177.25	224.32	71.85	169.58	132.74	62.79	60.62
61	E7_Da	NovelBoundary	0	0.00	0.00	1.83	5.23	0.00	17.38	5.61	4.52	6.54	4.24	0.00	0.00	0.00	6.77	4.45	15.12	0.00	8.58	0.00	6.01	3.15	0.00	0.00
62	E7a_E8a	KnownJunction	0	3.48	63.02	7.66	31.03	23.68	111.98	84.09	25.88	55.79	54.48	68.18	131.14	96.10	121.02	18.67	169.78	163.44	199.47	84.80	190.60	151.23	98.40	68.72
63	E8_Aa	NovelBoundary	0	0.00	3.16	1.69	7.92	4.33	15.90	14.35	7.19	6.54	6.39	5.11	0.00	0.00	2.47	15.70	0.00	8.13	3.81	3.95	0.00	8.53	2.39	0.00
64	ER8a	ExonRegion	0	18.22	68.25	14.12	56.85	28.70	103.78	67.77	50.07	90.85	68.73	98.26	180.92	212.95	164.30	28.00	156.98	201.08	247.40	81.08	205.44	128.57	84.95	92.26
65	E8_Da	NovelBoundary	0	0.00	13.02	0.00	10.02	0.00	14.25	2.03	7.89	10.07	10.29	0.00	0.00	5.84	0.00	4.45	4.36	18.42	1.87	0.00	12.66	0.00	0.00	0.00
66	E8a_E9a	KnownJunction	0	13.48	61.63	12.15	42.45	39.22	132.48	65.49	26.94	81.42	31.62	70.91	153.35	126.62	139.50	10.75	85.02	167.84	142.10	51.77	162.80	116.14	40.48	47.21
67	I8_AR2	ActiveIntronRegion	0	7.12	5.74	1.38	15.07	5.82	4.77	8.63	11.95	15.02	8.25	0.80	12.57	14.08	2.74	3.39	4.03	5.63	2.54	1.40	10.51	2.54	3.06	4.85
68	I8_SR2	SilentIntronRegion	0	6.14	5.34	0.24	10.09	0.85	1.35	8.83	7.06	10.89	9.61	3.70	15.87	24.75	1.94	2.62	1.98	12.42	4.11	0.97	8.69	6.34	2.63	1.79
69	E9_Aa	NovelBoundary	0	6.96	19.34	3.19	18.91	15.11	10.45	34.14	19.39	17.48	19.56	0.00	6.00	27.92	5.36	4.45	11.71	0.00	8.58	0.00	14.96	9.08	2.76	0.00
70	ER9a	ExonRegion	0	1.32	4.51	0.70	3.65	1.75	10.38	5.42	3.52	6.25	4.14	5.51	10.52	15.93	9.39	1.68	10.30	12.11	20.79	4.71	13.15	10.41	4.84	5.98
71	E9_Da	KnownBoundary	0	0.00	10.98	0.00	3.26	4.24	7.84	3.40	0.00	1.56	3.30	4.47	6.75	6.98	0.00	0.00	0.00	8.79	6.80	4.42	0.00	2.59	2.33	0.00
72	E9a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
73	ER9b	ExonRegion	0	0.14	0.40	0.30	0.50	0.00	0.00	0.06	0.17	0.12	0.45	0.00	0.06	0.28	0.00	0.00	0.15	0.11	0.12	0.05	0.00	0.14	0.07	0.00
74	E9_Db	NovelBoundary	0	19.63	161.75	7.72	29.07	29.12	38.44	20.89	17.58	25.38	43.14	2.68	12.60	0.00	9.83	4.45	0.00	0.00	1.74	13.18	22.95	0.00	3.06	0.00
75	I9	Intron	0	9.10	46.03	13.57	31.83	25.40	49.84	12.89	17.07	12.65	25.22	1.86	4.74	6.41	5.66	3.61	1.86	2.51	10.98	9.63	21.63	1.28	3.82	2.37
76	I9_SR1	SilentIntronRegion	0	5.92	52.76	8.88	24.93	20.09	45.81	13.51	17.47	13.68	27.03	1.50	3.42	13.33	7.99	3.79	2.62	2.79	17.00	8.65	23.09	2.30	5.57	3.02
77	I9_AR1	ActiveIntronRegion	0	4.67	25.59	7.73	18.70	17.38	42.96	12.36	8.82	11.79	20.85	2.34	5.59	4.43	5.71	2.37	0.89	2.67	10.03	8.62	24.66	1.50	2.62	2.64
78	I9_SR2	SilentIntronRegion	0	6.53	38.00	15.22	33.38	30.11	50.83	12.47	13.15	12.52	25.30	2.33	5.96	1.09	5.08	3.58	2.84	2.25	10.36	9.79	21.75	0.94	3.33	1.25
79	I9_AR2	ActiveIntronRegion	0	9.92	27.95	17.68	31.64	18.63	26.25	7.59	14.66	10.57	21.39	0.64	7.11	6.05	2.87	2.04	0.00	4.55	5.22	4.45	14.20	0.00	2.34	0.97
80	I9_AR3	ActiveIntronRegion	0	20.79	63.72	36.02	71.32	55.17	71.15	18.22	44.01	16.50	43.09	1.61	5.15	4.58	3.81	3.32	1.45	2.63	3.96	6.83	27.08	0.00	6.05	3.25
81	I9_AR4	ActiveIntronRegion	0	24.91	73.57	24.01	58.84	40.14	78.55	13.15	33.97	14.49	29.73	1.49	4.45	3.97	3.40	6.07	1.48	0.60	4.36	12.35	19.22	0.23	3.79	3.39
82	I9_SR3	SilentIntronRegion	0	19.09	95.75	18.23	45.63	34.13	68.01	17.57	19.08	7.32	16.72	2.88	0.00	1.86	3.82	6.38	1.43	1.59	8.19	25.54	10.40	0.58	1.22	1.41
83	E10_Aa	NovelBoundary	0	27.04	106.36	30.48	65.86	25.72	19.76	11.61	44.28	25.52	50.31	4.63	6.30	0.00	2.12	0.00	7.86	3.46	26.78	0.00	17.58	5.87	2.39	4.35
84	ER10a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00