Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SNAPC5 Gene 0 90.74 48.37 85.00 116.55 66.48 88.34 67.28 56.26 51.07 69.14 48.69 74.25 42.73 81.17 135.66 86.39 95.91 40.98 57.56 54.77 37.03 41.85 38.02 2 307979 Transcript 0 7.11 0.00 4.44 3.46 0.00 8.18 2.12 14.75 3.07 11.36 2.26 0.00 0.00 6.71 4.45 3.42 3.74 0.00 0.00 0.00 4.82 0.00 8.37 3 395589 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 316634 Transcript 0 146.34 72.23 126.49 172.55 95.45 104.43 93.10 78.62 65.05 97.69 64.36 129.83 62.58 114.47 185.63 101.35 121.52 45.50 82.54 61.84 43.85 68.58 42.99 5 IG14 Intergenic 0 9.24 23.62 38.89 26.29 13.56 9.01 10.12 16.87 5.45 22.39 7.54 14.00 2.11 12.29 11.70 7.19 11.33 18.91 31.80 30.69 2.58 4.22 7.33 6 IG14_AR1 ActiveIntergenicRegion 0 12.09 30.36 49.01 35.42 15.83 10.09 11.24 21.41 6.53 28.20 10.09 18.45 2.96 14.88 15.41 8.85 13.52 22.03 37.45 36.09 3.77 6.18 9.09 7 IG14_SR1 SilentIntergenicRegion 0 3.18 9.35 17.55 6.76 8.93 6.85 7.93 7.29 3.23 10.15 2.09 4.52 0.28 6.88 3.71 3.71 6.70 12.52 20.03 19.54 0.00 0.00 3.64 8 ER1a ExonRegion 0 0.00 1.81 1.77 4.39 1.19 1.83 0.59 1.34 0.00 0.00 1.07 0.00 0.00 1.62 2.90 0.00 3.30 1.23 0.00 4.49 1.71 1.16 0.00 9 ER1b ExonRegion 1 96.01 36.06 49.50 65.76 55.73 141.41 87.25 38.80 37.49 52.71 39.92 2.19 11.87 57.14 139.52 105.72 91.48 35.32 40.02 65.05 47.59 21.78 49.48 10 E1a_E2a KnownJunction 0 30.97 16.97 60.88 65.26 41.17 20.50 21.77 37.01 51.10 37.04 30.64 5.70 18.51 30.20 20.27 19.82 61.43 19.07 8.66 40.72 37.99 3.12 4.10 11 E1a_E3a KnownJunction 0 7.11 0.00 4.44 3.46 0.00 8.18 2.12 14.75 3.07 11.36 2.26 0.00 0.00 6.71 4.45 3.42 3.74 0.00 0.00 0.00 4.82 0.00 8.37 12 E2_Aa NovelBoundary 0 38.45 12.23 3.90 15.45 23.09 30.66 26.50 8.13 10.01 14.67 2.68 0.00 0.00 9.42 18.42 4.36 16.64 10.16 30.40 20.39 2.72 0.00 8.19 13 ER2a ExonRegion 0 41.58 23.70 74.75 118.65 42.46 24.43 25.99 49.93 54.55 73.81 69.73 30.84 48.98 73.57 119.63 80.08 131.27 42.95 54.72 75.08 74.29 21.58 38.34 14 E2a_E3a KnownJunction 0 39.12 28.35 126.43 217.42 24.96 33.96 28.00 66.54 80.90 102.51 78.02 11.70 59.41 150.75 316.34 229.77 115.38 85.31 159.82 111.98 55.04 81.75 89.29 15 I2_SR1 SilentIntronRegion 1 21.18 11.96 9.35 12.76 9.96 16.83 18.61 9.39 3.55 12.15 5.51 12.05 11.41 8.56 16.97 4.08 20.20 3.09 6.54 9.27 2.34 2.86 1.01 16 E3_Aa NovelBoundary 1 16.74 24.40 14.34 3.70 24.02 14.76 13.91 6.24 3.10 8.14 0.00 0.00 21.91 2.47 14.83 10.60 15.99 12.89 4.80 8.31 0.00 6.12 0.00 17 ER3a ExonRegion 0 90.23 60.65 136.76 164.60 88.90 154.17 84.74 74.32 92.38 101.09 81.39 117.43 68.18 142.48 233.51 172.96 158.51 95.98 82.98 105.44 66.37 59.98 80.37 18 E3_Da KnownBoundary 1 110.24 97.02 146.39 148.57 144.48 252.47 166.01 72.25 70.46 122.36 91.71 118.39 26.62 116.37 208.54 106.98 117.06 66.37 68.99 80.09 57.33 32.21 77.34 19 E3a_E4a KnownJunction 0 0.00 2.83 12.39 26.34 36.25 50.43 11.31 11.25 20.51 13.32 16.79 12.60 0.00 7.18 9.77 22.56 16.46 5.31 3.58 8.76 4.82 4.96 0.00 20 ER3b ExonRegion 0 146.34 72.23 126.49 172.55 95.45 104.43 93.10 78.62 65.05 97.69 64.36 129.83 62.58 114.47 185.63 101.35 121.52 45.50 82.54 61.84 43.85 68.58 42.99 21 E3_Db NovelBoundary 1 6.89 11.64 18.80 20.91 12.73 18.23 63.42 25.92 18.11 11.82 24.22 95.88 66.72 31.55 34.12 32.73 38.80 13.60 8.47 2.62 2.72 16.47 11.87 22 I3 Intron 0 22.00 10.72 11.56 22.86 20.26 21.01 17.04 12.29 8.94 7.55 10.08 37.02 23.16 14.66 15.41 15.49 16.82 6.66 7.32 9.20 2.66 7.54 6.40 23 I3_AR1 ActiveIntronRegion 0 15.67 7.53 2.25 9.19 12.11 6.79 15.79 7.42 6.06 5.62 10.33 59.70 33.25 21.49 27.16 36.67 21.72 4.53 5.24 10.50 3.61 10.28 10.87 24 I3_AR3 ActiveIntronRegion 0 17.00 10.59 3.96 22.34 16.00 18.91 14.38 9.78 9.18 7.99 9.65 43.41 30.37 14.96 12.01 10.97 11.46 1.80 4.84 10.39 3.35 6.80 2.89 25 I3_SR2 SilentIntronRegion 0 5.44 4.94 1.93 6.81 8.03 1.83 9.08 1.48 0.53 4.10 1.66 16.70 4.69 8.82 2.49 5.52 3.77 1.58 0.00 2.43 0.00 3.57 2.94 26 I3_AR4 ActiveIntronRegion 1 28.95 8.75 14.16 30.89 27.97 15.01 28.84 9.01 6.98 12.28 5.19 47.00 33.47 10.00 5.72 9.00 10.45 1.84 2.71 4.24 0.00 8.13 3.68 27 I3_AR5 ActiveIntronRegion 1 23.80 9.76 9.70 22.18 18.62 24.38 18.72 16.73 6.91 7.16 7.36 47.80 12.53 9.17 11.12 10.90 13.65 3.60 6.69 7.59 1.14 7.21 9.96 28 I3_SR3 SilentIntronRegion 0 23.39 15.44 16.66 25.54 36.01 25.04 20.04 15.88 11.89 5.01 16.15 14.03 11.92 12.64 16.32 18.17 20.56 13.15 7.53 8.93 1.17 4.51 6.00 29 I3_AR6 ActiveIntronRegion 0 24.47 11.84 19.22 24.22 21.63 25.08 15.18 13.48 10.52 7.03 12.11 23.20 20.14 17.49 20.42 18.34 22.91 12.79 11.25 10.22 3.64 8.13 7.16 30 E4_Aa NovelBoundary 0 300.42 412.29 183.41 144.04 165.20 174.90 104.18 149.67 205.73 165.79 449.59 156.35 295.11 517.93 435.75 341.36 467.79 112.13 131.30 100.29 182.86 225.16 219.13 31 ER4a ExonRegion 0 16.39 18.95 21.30 35.78 25.23 35.45 24.22 25.15 20.76 20.95 12.75 14.10 15.15 21.40 29.12 28.29 30.01 17.32 19.10 18.24 4.05 7.92 11.54