Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PDIA3 Gene 0 551.46 374.12 520.07 519.26 426.19 393.20 323.31 351.43 266.57 413.99 604.36 747.23 1298.13 697.15 652.37 610.00 528.03 379.10 267.29 294.98 782.31 1110.12 706.25 2 300289 Transcript 0 32.67 32.60 23.38 38.68 20.54 25.19 24.16 19.01 22.53 19.52 34.08 26.00 32.24 23.76 28.88 32.15 27.00 22.23 15.70 22.78 53.02 40.31 39.57 3 469684 Transcript 0 0.00 0.00 7.16 3.06 0.00 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 446523 Transcript 0 0.55 2.37 10.73 4.56 2.18 0.43 2.33 3.37 1.73 1.62 0.70 12.39 11.77 1.21 6.24 10.49 4.64 7.79 6.72 2.50 2.09 2.69 10.71 5 434494 Transcript 0 7.53 5.33 14.14 6.31 7.73 2.65 6.16 6.41 3.73 3.81 3.54 12.38 19.11 2.28 4.63 8.47 6.00 4.99 3.70 4.32 4.70 3.56 13.81 6 455250 Transcript 0 0.00 0.00 2.54 0.00 0.00 0.00 2.25 0.00 0.00 0.00 2.58 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 497349 Transcript 0 58.79 23.32 75.89 55.96 43.78 22.08 29.68 37.86 18.73 36.17 23.16 33.41 85.29 19.63 35.83 28.43 32.99 18.72 25.42 18.47 21.26 33.25 28.34 8 ER1a ExonRegion 0 8.24 9.42 4.77 0.57 0.84 11.39 9.96 2.64 6.70 1.87 42.12 1.60 2.22 17.52 19.85 32.07 26.41 14.00 8.38 11.31 64.95 19.63 42.50 9 ER1b ExonRegion 1 104.69 49.47 27.81 16.26 27.26 86.53 54.37 24.36 30.68 34.83 237.48 9.06 15.60 172.46 208.15 298.11 173.34 153.41 73.26 64.08 451.91 188.20 353.49 10 E1_Ac KnownBoundary 1 217.30 114.72 52.42 34.86 70.20 166.21 74.15 52.12 57.70 69.14 336.35 22.81 38.96 220.20 367.14 498.93 295.65 227.25 103.72 99.26 680.66 346.83 631.00 11 ER1c ExonRegion 1 160.96 95.76 111.53 58.17 56.73 234.75 125.75 59.52 57.01 123.07 360.31 17.86 71.65 467.23 383.82 456.77 370.30 469.47 110.19 170.76 854.72 315.55 492.93 12 E1_Ad KnownBoundary 1 28.67 32.69 111.76 40.99 25.98 81.60 17.80 83.91 86.23 182.61 620.26 31.51 129.21 427.75 306.45 142.70 624.22 130.95 54.03 256.12 1523.06 241.69 245.76 13 ER1d ExonRegion 1 75.11 122.56 328.11 213.41 47.82 118.49 56.80 194.32 195.02 344.07 613.02 196.21 366.07 1136.47 844.60 928.57 621.97 795.40 246.97 416.00 1357.44 1031.10 948.07 14 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E1a_E3a KnownJunction 0 0.00 0.00 1.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E1a_E4a KnownJunction 0 142.62 239.89 503.71 411.07 147.37 183.19 115.79 290.93 328.67 505.60 526.19 404.23 758.07 767.85 445.76 980.26 610.28 1205.80 253.65 462.44 1300.54 901.72 1253.56 17 E1a_E5a KnownJunction 0 0.00 0.00 7.16 3.06 0.00 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER2a ExonRegion 0 18.82 16.00 42.42 18.92 19.19 7.96 18.47 17.05 11.20 11.43 8.31 37.13 57.33 6.84 13.88 21.06 14.17 14.96 11.10 12.97 14.10 7.57 26.75 19 E2a_E4a KnownJunction 0 3.78 0.00 0.00 0.00 3.99 0.00 0.00 2.18 0.00 0.00 2.32 0.00 0.00 0.00 0.00 4.36 3.83 0.00 0.00 0.00 0.00 3.12 14.68 20 ER3a ExonRegion 0 1.65 7.12 30.58 13.69 6.55 1.30 6.99 10.10 5.20 4.86 2.09 37.17 35.32 3.62 18.71 31.46 13.93 23.37 20.17 7.51 6.28 8.08 32.14 21 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 ER4a ExonRegion 0 250.71 319.92 512.73 456.26 385.44 497.70 249.83 390.67 382.20 581.39 1280.68 729.16 1104.41 1419.09 934.46 894.76 1041.37 977.53 409.70 618.74 1866.49 1555.02 1156.07 23 E4a_E5a KnownJunction 0 468.97 502.28 602.79 559.30 646.01 977.96 538.87 456.58 522.51 765.30 1827.57 880.94 1632.85 2024.26 1150.63 1056.47 1507.90 726.47 667.22 865.18 2718.14 2293.99 1260.73 24 ER5a ExonRegion 0 618.71 696.33 747.86 732.54 494.32 794.37 533.04 591.51 563.29 869.17 1706.98 1222.54 2769.74 1783.01 1061.26 1301.17 1444.94 926.66 550.90 719.15 2794.39 2411.25 1510.54 25 E5_Da KnownBoundary 0 1415.21 1224.91 1066.17 1052.81 739.73 791.53 610.99 813.27 667.30 1057.02 1891.32 1989.80 2512.17 2831.32 1782.93 1835.33 1493.78 1188.55 768.78 1084.48 2657.35 3498.09 2240.61 26 ER5b ExonRegion 0 824.25 870.02 1057.47 1105.73 506.24 657.04 499.84 830.84 678.77 1056.80 2033.17 1305.81 1696.99 2078.60 1171.61 1520.71 1602.71 1324.43 711.35 927.24 2628.60 3361.63 1922.57 27 E5b_E6a KnownJunction 0 765.02 939.70 1248.36 1328.74 545.59 786.08 625.96 965.61 768.89 1197.24 2337.80 1503.94 2471.10 2006.90 1465.11 1580.78 1968.67 1470.77 720.02 1053.74 2999.54 3395.58 2020.63 28 E5b_E8a KnownJunction 0 0.00 0.00 2.54 0.00 0.00 0.00 2.25 0.00 0.00 0.00 2.58 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29 ER6a ExonRegion 0 470.71 551.59 1028.89 1192.97 480.74 600.40 436.51 869.27 725.48 1057.16 1772.06 1873.66 3125.56 2343.78 1505.40 1657.32 1605.95 1219.99 749.27 936.01 2757.33 3473.30 1973.23 30 E6a_E7a KnownJunction 0 535.35 567.99 1673.71 1849.98 829.54 806.81 639.79 1259.21 920.91 1343.82 1965.34 2398.53 4259.30 2583.86 1997.04 2126.96 1669.19 1246.05 839.08 1140.47 2407.22 4019.86 2467.16 31 ER7a ExonRegion 0 624.14 622.57 1392.39 1542.01 963.74 1007.15 741.89 1015.96 763.10 1196.94 1781.43 2230.11 3872.27 2161.94 1506.53 1742.37 1623.89 1017.21 705.83 1012.06 2160.47 3502.33 2060.80 32 E7a_E8a KnownJunction 0 732.13 880.24 1307.20 1304.16 1046.94 943.43 815.64 1026.73 718.40 1120.57 1906.27 2431.39 5802.54 2027.26 1739.91 1384.59 1588.87 720.21 540.72 942.84 1464.31 3720.67 1680.63 33 ER8a ExonRegion 0 873.65 1179.55 1321.25 1235.02 974.64 1082.44 921.85 929.51 684.58 1150.49 1914.45 2872.29 5417.47 1951.16 1526.31 1507.20 1604.97 748.13 631.65 831.75 1449.89 2925.08 1749.76 34 E8a_E9a KnownJunction 1 772.29 864.06 1151.29 992.31 537.01 734.80 782.17 857.17 626.18 1071.09 1256.00 1288.92 2516.23 129.73 178.87 422.28 1057.78 481.36 83.11 328.02 783.95 234.22 484.86 35 ER9a ExonRegion 0 1257.55 688.22 1003.54 908.04 949.74 990.05 816.51 770.64 564.86 951.08 1369.58 1615.99 2952.34 1326.98 1056.79 1017.36 1185.94 710.20 409.57 550.49 1243.00 2076.11 1112.71 36 E9a_E10a KnownJunction 1 1905.08 970.95 1337.03 1255.52 637.01 684.09 643.32 964.58 688.82 1049.95 1054.58 2689.78 4753.42 2340.47 2089.38 1938.98 932.21 1155.93 789.20 752.62 1176.61 3502.37 2099.42 37 ER10a ExonRegion 0 1557.28 754.70 974.77 850.08 450.15 569.10 487.38 661.28 507.03 792.86 1044.65 1079.01 1699.89 1131.39 837.46 902.42 890.61 833.34 398.10 462.85 2044.87 1734.89 1058.73 38 E10a_E11a KnownJunction 0 3272.80 2012.87 1891.00 1807.86 1565.96 1380.17 1294.67 1093.93 867.15 1251.42 2072.47 2522.62 4550.03 2995.78 2749.13 2201.13 1830.11 1593.05 1044.64 1002.86 4366.05 4419.34 2863.85 39 ER11a ExonRegion 0 2285.23 1653.01 1614.51 1507.55 1290.09 1180.18 984.08 952.63 742.30 1127.90 1974.04 2321.83 4346.32 2701.14 2460.26 2050.77 1702.32 1560.29 890.54 891.49 4042.23 3887.85 2559.07 40 ER11b ExonRegion 0 1672.05 1402.09 1146.38 1024.07 766.26 1167.88 896.97 689.74 496.63 840.12 790.06 889.03 2026.92 1010.25 1105.83 904.60 722.48 825.04 371.81 452.19 1581.25 1702.58 1189.89 41 E11b_E12a KnownJunction 1 1445.22 1770.21 1497.85 1242.83 857.22 1824.57 1379.86 776.01 616.63 1044.10 1254.48 483.76 2070.81 585.03 772.36 578.48 1066.29 437.62 266.55 611.37 2236.53 1074.71 816.58 42 ER12a ExonRegion 0 1346.14 1029.04 1586.34 1510.35 1077.60 1299.23 1016.07 996.77 671.32 1117.04 1128.77 1451.28 3142.39 1589.27 1810.94 2119.61 1074.53 1150.53 822.64 653.95 1823.17 3102.97 2307.38 43 E12a_E13a KnownJunction 1 2303.52 1494.34 2182.83 2023.89 1922.33 1053.54 963.67 1388.47 897.82 1482.08 1534.49 2924.60 6779.10 3225.93 4336.87 4690.22 1536.23 1840.12 2256.54 1049.33 2571.24 7217.96 4530.99 44 ER13a ExonRegion 0 1896.40 1137.01 2298.29 2205.79 1440.34 885.83 728.68 1448.70 912.28 1548.66 1897.77 2807.79 7023.87 2794.35 3405.99 3357.98 1730.54 1531.24 1840.86 1027.78 2595.39 6069.60 3623.13 45 E13_Ab KnownBoundary 0 2178.46 1143.28 2675.04 2720.73 1269.95 828.78 807.65 1618.77 1045.33 1768.05 2117.12 2320.21 5815.37 1852.68 2592.13 2048.10 1917.90 1096.77 1315.80 1108.00 2425.75 4080.60 2635.16 46 ER13b ExonRegion 0 1714.70 1037.04 2670.43 2710.48 1199.20 914.59 818.58 1503.64 992.33 1669.79 2541.47 2351.94 5332.16 1845.56 2313.18 1826.31 1938.49 872.42 941.41 990.14 2750.13 3489.94 2231.21 47 E13_Da KnownBoundary 0 16.60 29.07 64.78 37.52 40.58 10.45 68.10 33.97 17.13 23.45 17.21 17.41 34.25 0.00 10.14 24.95 16.08 14.34 4.52 17.07 6.18 5.14 15.54 48 E13a_E13c KnownJunction 0 3196.64 1671.41 2786.54 2943.42 1950.85 1564.16 1230.02 1441.08 1008.18 1669.34 2633.93 3116.82 7285.89 2822.19 3673.91 2490.20 1982.33 1080.61 1228.74 1066.84 2800.99 4528.58 2984.21 49 ER13c ExonRegion 0 58.79 23.32 75.89 55.96 43.78 22.08 29.68 37.86 18.73 36.17 23.16 33.41 85.29 19.63 35.83 28.43 32.99 18.72 25.42 18.47 21.26 33.25 28.34 50 E13_Ac KnownBoundary 0 154.77 35.78 46.07 25.44 47.28 21.46 31.49 13.60 7.99 18.64 2.47 6.00 34.25 9.01 22.99 15.12 8.60 8.29 17.98 15.66 0.00 3.12 13.06 51 ER13d ExonRegion 0 2904.68 1265.74 2221.25 2157.71 1657.79 1274.46 1143.69 1318.87 925.08 1429.77 1892.82 2515.80 5029.44 1794.91 2285.47 1532.52 1727.06 954.51 677.20 820.42 2272.49 2714.13 1894.70 52 E13_Db NovelBoundary 0 242.56 42.82 69.34 45.18 46.26 13.12 80.38 29.90 17.01 28.61 25.27 22.96 81.65 4.94 29.79 21.70 44.69 26.90 42.54 12.21 0.00 27.19 29.02 53 E13b_E14a KnownJunction 0 3784.52 1196.63 2242.65 2048.76 2506.54 1503.96 1558.63 1586.20 1082.60 1699.88 1946.86 3125.67 5188.30 2129.33 2971.27 1391.69 1684.80 1445.19 555.97 944.95 2195.07 2682.09 1725.96 54 ER14a ExonRegion 0 1675.60 880.70 1139.20 1152.57 1592.76 958.62 872.14 738.34 529.90 801.72 1199.81 2187.99 3121.57 1426.23 1803.59 1291.21 998.11 458.45 611.78 509.87 987.56 2530.12 1486.87 55 E14_Da KnownBoundary 0 268.42 300.01 50.59 149.80 165.87 120.56 112.57 50.73 80.70 65.76 84.39 91.53 122.72 48.91 107.18 88.87 72.93 30.10 43.86 77.66 61.34 222.46 68.03 56 ER14b ExonRegion 0 57.09 55.79 42.00 76.78 40.23 38.99 38.36 35.37 38.37 37.17 26.05 50.40 62.25 30.00 37.91 32.23 27.59 30.46 23.01 34.25 41.08 61.00 36.63