Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 USP3 Gene 0 117.91 169.72 119.23 111.89 105.15 110.80 100.43 83.99 65.81 110.09 373.72 206.08 494.15 321.86 279.07 155.31 163.19 115.05 168.37 149.35 68.62 94.13 69.18 2 380324 Transcript 0 22.65 40.42 13.77 14.37 10.35 13.30 17.13 13.54 11.45 16.88 79.43 15.17 67.00 105.77 62.87 27.17 33.80 34.90 31.90 38.14 15.91 19.64 11.66 3 268049 Transcript 0 10.10 11.60 12.02 12.76 10.09 20.29 11.43 8.73 4.77 10.57 41.01 10.67 52.13 31.00 24.28 17.47 15.05 53.12 39.92 27.22 23.94 12.98 19.65 4 IG23_AR6 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.72 0.00 11.38 3.67 1.71 15.11 9.82 3.06 8.50 0.00 0.00 0.00 4.39 1.07 0.00 5 ER1a ExonRegion 0 16.59 16.76 9.07 2.45 2.46 20.54 16.15 1.94 4.25 5.96 31.70 0.00 7.13 58.66 18.34 25.68 22.84 29.49 25.10 12.51 11.19 4.42 7.28 6 ER1b ExonRegion 1 21.79 23.78 16.59 10.71 7.51 23.44 20.71 13.05 12.87 29.03 151.04 11.50 49.62 129.61 62.68 60.91 79.90 64.63 50.98 51.04 49.75 19.68 31.84 7 E1a_E2a KnownJunction 0 0.00 0.00 5.77 10.39 0.00 0.00 0.00 2.30 4.95 9.48 30.85 0.00 13.64 28.14 17.80 12.30 8.79 71.13 55.91 14.13 15.26 17.57 23.13 8 E1a_E3a KnownJunction 1 8.89 64.20 23.27 21.74 0.00 8.12 16.61 22.47 25.00 36.08 185.57 19.81 97.72 243.22 120.77 50.07 70.50 65.50 56.47 82.77 33.79 41.09 23.65 9 E1a_E4a NovelJunction 0 0.00 5.66 7.36 5.83 0.00 0.00 4.06 0.00 5.56 2.74 4.47 0.00 0.00 2.18 6.30 0.00 0.00 6.30 26.35 5.75 0.00 2.51 3.76 10 I1_AR3 ActiveIntronRegion 0 24.84 20.22 21.96 14.15 9.08 3.96 19.26 16.63 9.34 10.29 3.43 12.37 35.46 3.38 6.54 8.54 9.07 4.12 10.53 17.68 1.93 1.60 3.26 11 I1_SR4 SilentIntronRegion 0 45.87 26.29 25.71 16.62 15.47 3.98 25.19 16.59 9.65 14.24 4.94 13.00 34.36 3.37 17.66 5.45 7.19 3.55 13.53 13.70 2.54 2.17 2.76 12 I1_AR4 ActiveIntronRegion 0 82.20 23.15 36.53 22.69 21.91 7.14 26.61 21.86 11.91 15.23 5.10 17.73 35.17 2.25 30.80 4.96 9.92 5.28 11.54 16.18 2.42 1.45 2.55 13 I1_SR5 SilentIntronRegion 0 24.93 13.44 13.20 15.62 15.06 4.21 22.46 11.44 10.13 9.38 3.37 14.92 41.24 3.22 13.39 6.59 7.53 3.97 9.05 13.56 2.15 1.42 3.54 14 ER2a ExonRegion 0 20.16 20.47 20.53 14.91 10.25 29.30 18.82 5.46 5.78 12.08 50.75 26.01 55.08 34.26 35.27 21.47 24.94 47.92 43.51 43.57 29.51 15.55 16.43 15 E2a_E3a KnownJunction 1 10.15 14.34 9.76 12.99 20.03 31.57 15.46 18.44 3.59 10.15 41.43 6.00 87.66 30.61 19.78 18.63 11.41 40.29 20.33 23.97 27.06 5.82 19.38 16 ER3a ExonRegion 1 27.90 57.87 35.33 31.88 23.99 47.59 24.74 45.68 28.81 51.16 219.27 48.55 195.83 279.46 150.53 157.77 106.49 113.32 99.69 124.73 63.94 56.15 80.69 17 E3a_E4a KnownJunction 0 20.97 82.42 43.85 38.36 35.31 51.05 29.85 48.55 30.03 45.83 250.48 61.52 181.32 240.33 143.64 170.64 118.84 117.11 107.86 136.59 45.53 44.46 89.03 18 I3_AR2 ActiveIntronRegion 0 9.00 12.03 1.96 1.49 12.29 12.09 23.40 3.47 0.66 1.50 15.28 18.16 35.83 9.47 8.76 8.50 10.42 3.49 7.73 16.90 1.33 2.95 0.00 19 ER4a ExonRegion 0 48.21 87.44 86.12 76.74 72.39 91.33 79.24 66.73 49.98 83.04 438.34 196.04 618.98 337.40 234.03 150.57 205.93 94.19 165.42 168.37 63.17 72.13 69.83 20 E4_Da NovelBoundary 0 20.82 12.89 35.87 38.42 4.33 0.00 20.67 30.72 18.17 14.53 11.27 29.86 28.73 0.00 36.84 14.87 17.67 26.74 16.57 35.28 3.15 3.12 4.35 21 E4a_E5a KnownJunction 0 61.34 115.51 84.33 78.74 50.00 83.99 75.78 73.11 44.24 101.05 400.79 239.93 661.64 342.52 231.66 185.68 229.73 93.60 178.26 174.24 55.97 75.19 77.85 22 I4 Intron 0 14.79 13.64 19.79 26.73 11.71 5.44 21.52 7.87 6.05 5.96 8.25 23.23 50.88 5.65 10.65 7.73 13.12 4.02 6.02 13.57 3.01 3.36 4.50 23 I4_SR1 SilentIntronRegion 0 19.23 15.65 13.09 21.53 15.66 5.63 26.27 11.43 6.93 6.94 7.92 24.65 50.30 6.59 16.77 10.91 18.81 6.12 9.84 15.14 3.63 2.66 4.47 24 I4_AR1 ActiveIntronRegion 0 10.19 8.72 10.02 19.20 7.11 5.82 23.02 7.54 6.99 6.47 10.77 30.25 64.47 5.69 8.89 10.02 17.81 6.87 8.21 18.42 4.10 4.41 8.95 25 I4_AR2 ActiveIntronRegion 0 4.74 7.40 16.11 30.57 13.36 3.35 17.07 16.08 11.06 9.23 14.78 27.47 70.32 10.57 8.68 7.53 20.40 6.07 6.23 21.44 1.92 2.67 8.51 26 I4_SR4 SilentIntronRegion 0 13.37 7.10 44.23 34.54 20.78 1.53 12.71 8.07 2.71 5.26 4.21 15.89 28.59 4.20 13.43 3.01 9.22 3.01 4.71 7.72 2.75 1.20 4.26 27 I4_AR4 ActiveIntronRegion 0 19.21 13.33 48.55 46.53 22.19 8.00 29.25 14.63 5.22 5.06 6.74 12.73 57.98 10.35 16.41 14.91 11.84 2.50 5.30 11.76 4.93 1.09 4.76 28 I4_SR5 SilentIntronRegion 0 15.29 7.68 48.33 32.25 5.48 4.72 14.52 7.30 7.23 1.84 5.46 2.89 20.32 2.66 12.85 3.11 13.05 1.50 2.58 14.49 2.62 2.15 2.70 29 I4_AR5 ActiveIntronRegion 0 16.48 23.21 41.57 53.12 18.50 4.97 17.26 8.94 6.47 6.75 3.41 13.69 32.30 3.76 9.91 4.55 4.06 1.21 2.98 11.47 0.90 2.04 1.46 30 I4_SR6 SilentIntronRegion 0 32.34 21.57 52.99 49.05 14.45 6.36 23.36 8.94 4.70 7.33 5.96 11.97 42.21 6.30 15.33 8.02 15.43 5.90 6.14 10.36 2.87 2.61 7.36 31 I4_AR8 ActiveIntronRegion 0 9.85 10.09 15.18 18.70 4.02 6.11 20.47 4.96 3.94 4.30 20.52 28.99 77.42 6.18 5.00 13.30 21.70 3.84 11.70 15.73 10.18 5.58 5.13 32 ER5a ExonRegion 0 56.62 117.71 102.48 100.68 48.29 75.14 68.26 75.37 56.21 109.39 533.94 267.04 620.09 368.69 226.06 183.35 226.31 132.16 178.49 181.15 83.40 91.77 67.02 33 E5a_E6a KnownJunction 0 56.01 133.20 106.53 117.23 107.30 115.16 94.15 83.91 88.02 136.83 616.00 319.45 667.33 509.69 300.88 209.26 302.01 127.10 225.23 218.92 98.72 140.47 77.68 34 ER6a ExonRegion 0 48.65 186.69 116.51 121.78 111.47 116.74 119.45 88.97 77.57 130.44 633.21 378.88 962.20 549.74 282.02 258.90 290.24 147.80 275.77 209.52 90.94 96.60 94.22 35 E6a_E7a KnownJunction 1 56.08 234.63 105.29 124.83 102.04 111.36 157.79 82.48 62.35 127.49 413.00 316.00 1069.41 473.43 344.89 205.33 238.99 131.32 203.30 217.83 69.87 88.36 86.13 36 ER7a ExonRegion 0 33.30 151.78 93.32 104.58 89.14 122.64 103.72 67.16 70.58 119.51 465.99 309.79 792.05 491.21 217.42 196.63 243.11 173.64 212.65 177.62 107.82 89.79 70.20 37 E7a_E8a KnownJunction 1 45.93 166.42 98.93 92.90 73.09 103.18 109.97 72.58 66.49 124.37 547.30 406.03 947.34 510.27 199.15 201.49 236.93 156.28 229.75 169.89 100.64 119.34 51.90 38 ER8a ExonRegion 0 58.39 133.41 117.88 112.50 61.00 81.54 88.83 63.30 58.97 125.84 485.63 351.71 746.13 499.53 239.05 265.35 231.32 214.91 283.67 187.21 113.12 97.69 96.57 39 E8a_E9a KnownJunction 1 61.34 167.47 142.51 102.08 102.21 102.21 67.30 79.40 64.76 125.07 559.98 346.46 529.35 473.90 199.15 251.05 218.14 245.16 305.42 213.99 156.85 113.10 105.34 40 ER9a ExonRegion 0 76.14 162.38 111.30 90.74 92.59 114.31 103.19 71.31 53.86 105.87 464.23 294.63 597.69 434.44 214.06 204.01 212.04 227.11 235.88 173.18 123.27 84.69 100.46 41 E9a_E10a KnownJunction 0 131.06 266.07 136.31 130.02 46.26 162.69 146.00 84.61 64.55 138.20 501.55 250.88 519.93 395.96 201.25 214.73 249.28 269.65 249.23 217.77 146.78 77.15 94.41 42 I9_AR3 ActiveIntronRegion 0 20.81 4.41 7.96 18.17 22.30 1.83 10.59 13.83 7.62 6.50 3.87 21.65 15.63 1.62 16.92 2.97 13.20 1.85 3.19 10.64 2.20 0.00 5.87 43 I9_AR5 ActiveIntronRegion 0 18.70 2.71 16.34 22.49 13.82 1.53 8.61 14.98 6.79 8.03 3.87 21.65 23.45 0.00 21.76 5.94 20.91 1.85 3.19 13.83 0.00 2.08 2.94 44 I9_AR6 ActiveIntronRegion 0 25.93 7.32 14.95 23.24 19.13 1.83 7.68 10.89 5.56 8.26 5.41 18.62 23.68 1.06 18.42 5.80 18.82 3.70 2.39 11.38 0.00 3.44 1.03 45 ER10a ExonRegion 0 78.96 213.04 96.30 86.47 65.78 121.72 97.61 65.28 66.32 108.38 424.00 224.98 554.35 422.53 262.28 221.62 228.91 156.07 192.40 175.13 112.69 97.97 95.83 46 E10_Da NovelBoundary 0 3.78 0.00 3.05 3.20 4.33 0.00 5.79 1.73 10.82 7.49 20.64 48.02 38.63 13.77 8.90 26.49 28.70 33.83 0.00 36.30 11.55 7.47 19.21 47 E10a_E11a KnownJunction 0 92.91 248.31 126.25 114.74 79.63 147.07 142.20 64.73 91.41 109.95 435.85 176.01 619.60 432.16 357.75 234.21 210.19 132.11 159.72 168.93 114.35 83.95 92.28 48 I10 Intron 0 11.44 18.05 6.19 12.47 11.59 10.13 19.63 8.25 9.88 9.25 22.69 40.59 107.08 18.39 8.73 16.35 17.29 7.82 13.50 29.99 6.31 15.07 9.96 49 I10_SR1 SilentIntronRegion 0 11.25 23.78 7.18 15.09 13.65 11.33 21.94 10.29 10.53 11.19 26.73 45.08 138.79 18.85 8.39 20.63 21.74 10.42 15.03 37.64 7.11 17.48 11.23 50 I10_AR1 ActiveIntronRegion 0 8.12 8.86 5.27 10.42 9.48 7.65 17.13 7.18 11.00 8.27 19.58 45.81 102.86 18.71 9.49 11.08 14.94 4.48 11.40 24.50 3.85 16.22 9.30 51 E11_Aa NovelBoundary 0 77.50 60.58 13.31 28.73 37.44 41.85 33.43 17.00 9.84 24.58 41.96 45.01 117.36 20.54 9.77 24.78 35.06 8.29 26.35 41.23 8.65 38.70 7.17 52 ER11a ExonRegion 0 83.02 219.63 134.55 130.44 118.53 147.00 132.37 80.61 85.86 123.06 450.11 268.43 653.80 371.03 285.57 151.11 212.21 104.56 159.71 172.42 73.73 122.17 64.39 53 E11a_E12a KnownJunction 0 139.06 233.45 178.23 172.04 124.62 149.91 129.57 95.83 96.87 141.46 541.82 316.45 750.60 352.88 342.17 194.65 221.04 99.45 217.14 149.25 63.20 177.88 82.89 54 ER12a ExonRegion 0 131.69 201.75 172.26 157.98 143.27 139.93 129.19 85.78 99.68 139.27 486.09 246.14 753.47 372.10 321.57 196.89 201.64 83.74 196.78 183.56 47.67 142.89 84.08 55 E12_Da NovelBoundary 0 0.00 8.35 15.17 16.61 19.27 0.00 27.07 29.82 11.02 19.42 7.32 32.26 133.92 5.47 9.52 3.50 21.51 12.60 4.52 19.24 3.03 0.00 0.00 56 E12a_E13a KnownJunction 0 151.21 212.73 116.97 104.88 98.22 104.83 79.98 52.99 116.72 121.39 325.77 267.24 741.02 269.29 347.86 127.06 214.40 60.15 134.22 134.55 36.08 141.82 65.90 57 I12 Intron 0 21.11 23.07 18.46 22.44 20.38 8.63 20.14 15.60 15.21 12.84 14.45 21.67 54.49 9.89 18.63 17.05 17.99 14.33 14.13 21.43 5.88 6.98 8.32 58 I12_AR2 ActiveIntronRegion 0 49.31 36.15 25.08 30.74 31.88 6.80 29.01 20.12 13.69 12.42 14.52 15.23 57.24 13.26 26.26 24.44 25.65 18.19 16.56 28.33 5.83 6.48 11.01 59 I12_SR2 SilentIntronRegion 0 35.38 18.77 24.72 31.84 32.42 7.86 26.83 16.39 13.63 15.79 12.94 16.10 61.26 10.98 27.82 19.45 14.06 15.99 25.39 22.24 7.55 6.61 8.74 60 I12_AR3 ActiveIntronRegion 1 61.01 60.50 28.91 31.52 33.87 5.23 19.28 20.40 12.24 14.62 7.96 24.77 129.95 5.69 11.79 7.53 10.46 4.09 11.10 18.86 0.70 9.87 2.79 61 I12_SR3 SilentIntronRegion 0 17.57 23.72 21.41 23.68 19.62 10.07 19.19 15.83 15.83 11.48 13.23 17.44 46.54 9.32 16.51 14.13 16.25 13.28 11.71 20.59 4.28 6.47 7.51 62 I12_AR4 ActiveIntronRegion 0 15.31 29.86 13.98 18.69 20.11 11.85 20.28 15.92 22.37 20.53 33.81 35.30 56.21 17.25 23.38 33.40 28.99 29.17 20.36 31.24 15.64 13.61 13.20 63 E13_Aa NovelBoundary 0 86.09 12.96 19.01 33.83 18.93 59.28 25.26 37.05 59.66 24.34 33.59 48.32 70.61 5.71 34.24 11.54 21.13 8.71 22.97 45.83 2.66 22.90 20.57 64 ER13a ExonRegion 0 210.26 262.38 105.53 106.71 79.62 126.87 109.72 65.39 72.59 122.55 312.93 236.67 525.44 251.94 221.06 126.83 137.61 57.39 142.06 110.96 30.57 104.88 53.03 65 E13_Da NovelBoundary 0 58.23 66.24 35.04 56.74 82.00 71.55 43.41 30.07 50.72 34.44 42.48 17.86 148.37 39.14 25.47 27.26 26.55 7.05 0.00 32.79 6.24 22.78 3.16 66 E13a_E14a KnownJunction 0 278.20 440.51 103.34 110.97 185.99 213.29 192.46 92.66 82.99 117.55 416.58 322.91 643.63 425.98 333.15 240.19 194.86 69.81 175.06 154.17 49.42 118.24 81.95 67 E14_Aa NovelBoundary 0 48.60 49.20 22.56 25.07 29.54 49.35 42.13 29.98 39.03 34.22 38.80 85.68 107.30 34.26 61.93 23.75 30.48 36.23 24.85 33.62 11.49 13.78 7.51 68 ER14a ExonRegion 0 150.96 238.27 107.14 79.76 119.02 195.43 137.29 80.36 69.78 118.08 317.98 186.96 506.93 336.72 280.43 157.21 122.48 99.00 162.31 116.31 58.92 91.36 84.98 69 E14a_E15a KnownJunction 0 197.07 221.54 126.25 92.73 135.14 136.51 141.59 93.77 62.24 127.97 371.09 200.77 763.75 370.59 350.58 216.52 157.92 184.84 191.44 148.42 63.88 92.95 108.33 70 ER15a ExonRegion 0 106.04 171.06 146.54 130.20 82.00 82.31 90.91 94.76 74.38 125.23 289.91 181.46 416.72 359.26 334.75 224.44 141.02 163.55 221.76 170.49 72.82 125.93 90.39 71 E15a_E16a KnownJunction 0 159.29 205.03 197.24 175.17 130.48 105.39 90.49 131.72 84.46 153.92 417.26 255.38 331.63 467.19 562.34 252.41 192.89 134.76 266.64 231.76 105.27 100.30 80.92 72 Ix Intron 0 30.86 25.20 13.67 11.09 24.32 14.39 17.49 17.77 18.11 12.18 19.59 19.46 49.73 16.59 19.45 18.75 16.08 13.94 9.58 17.46 4.47 8.11 4.80 73 Ix_SR1 SilentIntronRegion 0 24.81 30.60 12.33 13.02 21.26 12.09 17.18 13.97 20.30 10.49 18.97 17.52 49.78 14.79 12.57 16.93 10.29 9.97 9.34 18.80 3.61 7.38 4.26 74 Ix_AR2 ActiveIntronRegion 0 27.18 19.42 17.56 9.12 23.83 16.79 18.44 17.40 19.80 11.22 19.65 30.31 65.60 13.99 23.55 17.67 17.25 10.09 8.95 17.40 3.73 11.54 4.74 75 Ix_SR2 SilentIntronRegion 0 38.69 27.43 11.25 11.84 27.16 14.01 17.19 20.87 15.56 14.40 20.30 11.19 36.27 20.42 20.51 21.29 19.11 20.29 10.51 16.99 5.79 5.62 5.31 76 E16_Aa NovelBoundary 0 68.01 40.98 41.96 20.81 16.30 34.70 22.21 33.48 24.25 14.16 17.06 25.51 54.54 16.72 42.90 27.69 8.51 31.21 7.91 19.75 6.30 8.76 18.01 77 ER16a ExonRegion 0 214.75 234.88 186.27 178.79 185.47 144.97 139.64 140.09 92.78 150.35 420.99 228.27 510.82 326.57 439.88 153.31 158.95 110.79 185.87 175.78 62.95 126.89 72.45 78 ER16b ExonRegion 0 42.46 40.29 8.96 18.91 28.60 11.23 18.62 16.20 5.09 8.60 21.02 25.71 96.15 15.43 49.50 5.76 8.05 9.70 14.14 19.15 2.75 13.41 4.04