Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PARP16 Gene 0 46.84 111.16 70.89 61.21 37.58 46.82 41.44 38.43 31.79 49.63 95.98 45.26 36.55 57.88 37.21 35.91 40.07 53.63 31.64 55.66 37.60 21.75 20.34 2 261888 Transcript 0 4.94 13.74 9.82 11.48 11.47 4.71 7.11 7.28 7.95 9.76 20.80 11.26 1.92 14.58 10.27 12.55 19.45 12.71 4.11 9.09 13.89 5.73 5.29 3 432843 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 444347 Transcript 0 0.00 0.00 0.00 0.00 0.00 2.27 2.25 1.81 3.15 1.40 0.00 0.00 0.00 2.47 0.00 0.00 0.00 1.74 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 4.18 4.94 5.10 2.74 3.51 9.68 3.70 5.72 4.98 9.98 25.11 5.37 3.00 13.48 8.81 7.57 15.70 15.28 9.27 10.54 16.44 5.31 7.70 6 E1_Ab KnownBoundary 0 6.82 9.01 28.59 10.42 14.35 23.51 9.49 22.59 23.52 36.40 39.85 23.41 6.82 23.96 14.09 19.14 46.56 49.54 32.00 31.13 24.96 15.00 4.35 7 ER1b ExonRegion 0 15.35 28.27 33.16 14.66 10.80 24.58 13.25 21.41 16.85 29.20 50.95 13.24 10.83 38.00 18.01 14.52 29.98 37.28 19.37 41.48 22.67 9.82 11.02 8 E1a_E2a KnownJunction 0 20.30 61.04 59.70 32.16 54.50 67.06 26.50 46.33 31.83 72.61 88.13 38.11 27.27 77.93 22.25 27.69 30.76 67.57 32.38 64.75 42.50 13.66 20.40 9 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.27 2.25 1.81 3.15 1.40 0.00 0.00 0.00 2.47 0.00 0.00 0.00 1.74 0.00 0.00 0.00 0.00 0.00 10 I1 Intron 0 4.42 9.00 14.36 18.47 4.93 4.74 10.09 8.55 9.04 14.71 2.61 2.72 3.80 1.96 4.19 1.46 2.03 10.95 5.09 24.84 2.17 0.00 3.25 11 I1_AR1 ActiveIntronRegion 0 3.68 8.36 15.22 16.63 4.99 4.73 8.07 7.90 9.34 14.03 2.59 2.47 4.03 2.31 4.10 2.07 1.64 12.31 4.66 23.84 2.64 0.00 3.58 12 I1_SR1 SilentIntronRegion 0 6.30 10.69 12.51 23.26 4.88 4.84 15.18 10.27 8.46 16.59 2.72 3.39 3.28 1.15 4.50 0.00 3.00 7.82 6.21 27.69 1.05 0.00 2.50 13 I1_AR2 ActiveIntronRegion 0 1.75 16.13 8.61 10.03 12.17 4.44 8.78 9.47 5.47 11.03 1.15 3.12 2.29 2.40 3.68 5.46 3.84 12.55 0.00 21.13 5.02 0.00 1.40 14 E2_Aa NovelBoundary 0 17.34 5.20 3.13 15.62 6.62 8.35 2.03 16.51 5.53 14.64 2.26 0.00 0.00 0.00 0.00 0.00 0.00 4.15 0.00 8.76 0.00 0.00 0.00 15 ER2a ExonRegion 0 15.78 74.71 68.95 39.62 25.40 33.01 28.47 67.51 41.01 71.85 96.79 34.70 31.50 77.00 23.08 47.17 42.96 71.33 35.15 61.99 51.04 26.15 18.15 16 E2_Da NovelBoundary 0 6.59 25.72 18.27 23.01 3.90 13.46 8.13 16.47 8.13 13.67 2.53 0.00 6.82 2.47 0.00 3.67 3.55 15.25 4.14 24.03 2.72 5.57 0.00 17 E2a_E3a KnownJunction 0 13.78 94.33 74.81 60.73 21.22 55.14 38.42 69.74 39.73 85.61 115.66 50.72 27.27 60.27 18.42 40.84 25.15 66.82 49.13 55.54 59.24 20.21 11.87 18 E3_Aa NovelBoundary 0 13.19 36.38 18.63 50.81 14.77 5.00 3.53 26.04 9.61 19.56 0.00 5.85 0.00 2.30 0.00 0.00 8.60 22.92 4.52 14.83 3.15 2.94 3.84 19 ER3a ExonRegion 0 32.72 96.30 106.03 99.03 57.86 62.51 49.31 80.42 57.23 88.75 160.93 60.53 86.12 87.07 42.82 61.31 45.05 100.05 48.37 81.53 64.82 34.66 28.16 20 E3_Da NovelBoundary 0 0.00 24.67 5.71 8.02 3.57 5.68 12.01 0.00 8.04 6.90 0.00 5.70 0.00 0.00 0.00 0.00 0.00 15.59 0.00 11.76 0.00 0.00 0.00 21 E3a_E4a KnownJunction 0 38.90 72.09 83.05 79.38 37.69 37.31 30.74 33.56 43.34 65.81 111.24 49.52 73.05 72.93 47.72 50.59 29.92 81.33 35.01 45.83 50.47 19.23 18.69 22 E4_Aa NovelBoundary 0 0.00 5.20 4.55 11.45 0.00 2.50 1.68 2.55 9.84 6.02 4.95 0.00 6.66 0.00 0.00 8.12 0.00 24.62 0.00 10.87 5.62 5.94 0.00 23 ER4a ExonRegion 0 26.20 97.99 60.74 60.66 30.57 50.16 45.98 36.42 48.18 54.80 102.61 51.42 54.73 67.03 37.11 49.85 41.88 78.13 36.67 58.88 54.72 17.30 25.71 24 E4a_E5a KnownJunction 0 20.97 101.96 74.66 77.18 42.02 39.58 57.99 31.01 57.93 57.08 87.39 55.82 57.95 59.98 52.78 51.27 51.89 107.74 45.18 50.43 51.58 39.31 28.60 25 ER5a ExonRegion 0 35.58 92.67 69.82 69.56 53.70 57.56 41.43 42.57 55.60 64.32 120.67 42.50 44.42 77.73 40.64 48.54 75.15 90.08 43.85 83.62 60.32 27.39 27.57 26 E5_Da NovelBoundary 0 16.00 23.94 21.52 16.75 8.06 10.39 6.14 16.51 11.28 9.05 12.11 0.00 6.82 2.47 0.00 0.00 9.07 13.76 0.00 23.65 8.34 0.00 4.18 27 E5a_E6a KnownJunction 0 3.78 19.34 7.13 16.81 21.65 0.00 10.82 8.71 10.45 5.16 18.48 12.60 0.00 14.54 16.32 15.89 25.25 9.24 0.00 6.33 14.33 5.63 3.93 28 E5a_E6b KnownJunction 0 13.85 62.82 64.13 37.19 38.79 42.25 28.79 18.03 32.99 53.19 75.02 36.91 13.64 64.75 21.14 42.30 38.52 44.36 36.42 38.80 23.23 26.70 26.38 29 I5 Intron 0 10.22 23.93 14.67 22.74 11.51 10.04 12.95 12.23 11.50 11.86 9.65 2.04 2.15 4.22 1.77 4.94 4.69 19.97 6.98 25.12 6.53 3.21 3.69 30 I5_AR1 ActiveIntronRegion 0 6.86 12.84 11.02 15.28 2.45 7.79 7.93 9.43 11.50 10.47 11.98 1.22 3.51 3.29 0.74 8.42 2.71 22.16 5.52 25.47 6.80 2.57 3.98 31 I5_SR1 SilentIntronRegion 0 12.39 31.07 17.03 27.57 17.32 11.51 16.18 14.04 11.53 12.77 8.18 2.56 1.29 4.83 2.43 2.74 5.96 18.63 7.93 24.97 6.37 3.63 3.52 32 E6_Aa NovelBoundary 0 0.00 22.36 23.74 13.85 7.81 10.51 11.39 0.00 14.79 4.73 2.53 0.00 0.00 0.00 0.00 0.00 3.65 10.28 0.00 2.75 2.97 0.00 0.00 33 E6_Ab NovelBoundary 0 0.00 3.35 6.39 19.94 8.23 0.00 1.85 0.00 1.50 4.11 0.00 0.00 6.49 0.00 0.00 0.00 4.49 17.00 3.76 5.82 0.00 0.00 0.00 34 ER6a ExonRegion 0 11.11 27.96 26.04 25.21 20.74 9.17 12.58 13.83 16.37 20.64 38.66 27.06 4.69 28.42 15.96 26.75 36.31 26.33 7.17 15.96 24.79 11.98 9.54 35 ER6b ExonRegion 0 72.19 162.66 91.40 80.61 48.73 58.23 55.90 41.14 32.70 53.96 110.10 59.69 40.35 64.16 48.33 39.49 43.70 51.89 35.25 62.81 36.39 25.89 23.08 36 ER6c ExonRegion 0 0.71 2.71 1.02 1.14 0.00 0.00 1.32 0.86 0.00 3.25 0.97 0.00 0.00 1.89 0.00 0.00 0.55 0.00 0.00 3.55 0.00 0.00 0.00