Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 C15orf44 Gene 0 101.97 136.56 109.63 124.43 91.00 140.63 78.23 70.36 66.67 114.07 157.74 130.90 112.43 185.35 165.00 173.80 147.00 94.26 89.06 82.21 68.48 96.56 72.20 2 395644 Transcript 0 5.05 13.64 9.26 9.69 7.56 17.12 8.04 7.09 6.79 12.38 12.89 10.59 11.39 26.36 19.29 16.31 16.62 14.65 16.76 9.95 10.54 4.94 5.87 3 431261 Transcript 0 9.78 17.30 1.57 5.43 0.00 14.37 2.25 4.27 6.54 9.43 29.06 0.00 12.01 4.71 0.00 19.14 8.42 12.15 35.30 16.68 10.26 3.12 4.18 4 442903 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.06 0.00 5 313182 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 420799 Transcript 0 0.86 3.29 0.00 1.46 0.00 1.50 0.00 0.00 0.00 1.14 2.47 6.94 4.69 5.74 0.83 2.99 5.24 0.00 3.79 3.55 1.00 3.31 3.97 7 IG5_AR3 ActiveIntergenicRegion 0 3.40 0.04 1.77 9.47 1.61 2.78 0.78 2.08 14.16 1.99 2.14 0.99 1.19 1.14 3.12 1.56 2.29 1.37 0.88 1.18 0.00 0.87 0.72 8 IG5_AR2 ActiveIntergenicRegion 0 6.41 0.44 0.90 13.35 6.84 8.24 6.02 6.42 15.07 3.01 12.55 7.20 19.74 10.69 5.40 8.27 4.87 5.51 16.84 8.68 19.81 7.22 2.97 9 IG5_AR1 ActiveIntergenicRegion 0 4.38 1.32 3.26 2.89 3.37 4.61 3.92 2.32 5.45 1.66 9.23 10.59 7.39 10.14 9.63 22.67 9.51 8.46 15.25 6.13 30.39 10.74 8.34 10 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.44 0.00 0.00 0.00 0.00 0.00 1.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11 ER1b ExonRegion 1 17.19 47.70 5.01 11.11 36.00 55.29 38.92 7.33 5.80 14.11 46.04 0.00 0.00 42.57 64.88 60.70 66.92 21.67 16.60 27.92 28.38 9.72 19.49 12 E1_Da KnownBoundary 0 30.89 61.77 9.08 13.55 3.74 18.23 13.96 8.50 8.01 19.05 34.27 0.00 0.00 56.27 96.79 45.97 60.68 56.13 42.64 31.45 27.06 13.17 7.77 13 E1a_E3a KnownJunction 1 46.82 98.01 11.74 18.48 113.67 156.33 103.43 8.42 19.76 34.20 94.34 0.00 0.00 54.92 94.57 147.91 136.70 47.30 35.39 50.94 53.50 32.09 58.56 14 E1a_E3b NovelJunction 0 3.11 15.00 1.74 2.06 3.74 29.93 13.03 0.00 1.56 5.78 13.06 5.85 0.00 7.30 9.52 3.25 4.68 1.66 0.00 8.05 2.47 2.69 0.00 15 E1a_E4a NovelJunction 0 3.78 12.76 3.67 0.00 4.07 13.46 2.25 1.56 5.35 0.00 9.95 0.00 0.00 0.00 4.45 0.00 12.25 5.93 0.00 3.20 2.53 5.45 0.00 16 ER1c ExonRegion 0 6.82 22.94 12.42 15.76 6.94 20.89 10.73 11.42 14.24 23.27 19.83 6.97 29.44 47.64 36.56 47.63 40.96 50.28 43.34 27.13 23.01 10.13 16.99 17 E1_Db NovelBoundary 0 0.00 39.47 7.69 23.67 23.34 19.42 38.42 11.21 3.18 19.21 16.00 13.65 14.45 39.32 4.45 19.14 3.74 2.11 13.08 20.65 8.28 2.33 4.27 18 E1b_E3a KnownJunction 0 0.00 9.08 17.36 20.98 19.86 29.24 19.43 6.78 12.90 20.23 30.17 24.31 13.31 54.74 39.56 16.41 25.53 8.33 20.89 9.01 19.15 7.96 3.67 19 E1b_E3b NovelJunction 0 0.00 5.20 1.83 7.59 0.00 0.00 6.01 1.97 0.00 2.58 2.68 0.00 0.00 11.95 4.45 4.10 21.88 1.70 0.00 12.14 2.97 0.00 3.76 20 E2_Aa NovelBoundary 0 17.63 49.00 12.06 19.64 20.20 7.50 27.65 6.82 12.53 18.75 13.06 24.61 28.73 45.85 17.92 24.35 17.58 17.41 14.40 25.63 8.77 2.39 32.35 21 ER2a ExonRegion 0 1.71 6.58 0.00 0.87 0.00 3.00 0.00 0.00 0.00 0.62 2.88 13.88 9.38 11.47 1.66 2.74 6.08 0.00 7.58 7.09 1.99 6.61 4.10 22 E2a_E3a NovelJunction 0 6.15 15.00 9.93 9.82 0.00 9.54 6.05 10.84 5.99 12.95 20.43 6.30 13.31 16.72 8.90 15.30 13.18 20.52 17.41 3.26 2.90 0.00 7.85 23 E2a_E3b KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 0.00 1.67 2.05 0.00 0.00 0.00 0.00 3.25 4.39 0.00 0.00 0.00 0.00 0.00 3.84 24 E3_Ab NovelBoundary 0 48.01 74.86 18.72 38.29 73.17 105.39 81.83 18.40 23.90 41.13 82.07 22.81 19.48 23.19 5.69 70.84 112.39 28.31 28.05 29.85 35.27 28.04 18.78 25 ER3a ExonRegion 1 33.63 88.23 19.88 31.72 79.68 127.35 92.31 12.10 17.36 38.29 110.18 11.30 11.73 86.80 80.27 105.18 144.32 20.43 35.92 42.79 49.83 25.00 35.57 26 ER3b ExonRegion 0 20.82 58.11 19.12 28.06 18.64 42.04 31.47 10.92 18.73 32.58 48.62 23.62 31.19 47.02 32.27 49.87 68.62 20.48 19.32 27.47 22.48 16.96 19.12 27 E3_Da KnownBoundary 1 37.49 103.40 19.96 65.63 20.20 61.84 36.66 31.42 25.38 72.72 123.56 84.63 79.22 115.13 85.79 57.85 135.30 34.66 32.10 66.92 50.23 54.13 71.88 28 E3a_E4a KnownJunction 0 9.78 17.30 1.57 5.43 0.00 14.37 2.25 4.27 6.54 9.43 29.06 0.00 12.01 4.71 0.00 19.14 8.42 12.15 35.30 16.68 10.26 3.12 4.18 29 ER3c ExonRegion 0 23.43 41.34 34.32 46.96 35.12 96.51 43.46 26.66 29.12 68.97 112.14 107.33 55.56 120.33 82.05 117.20 84.25 45.37 28.60 39.21 33.95 60.39 47.38 30 E3b_E4a KnownJunction 1 34.60 78.74 50.41 59.13 92.95 166.95 129.09 26.49 40.80 105.94 193.84 95.58 47.56 230.27 91.11 198.15 146.33 59.44 58.92 58.23 67.65 103.67 57.96 31 E3b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.06 0.00 32 ER4a ExonRegion 0 58.48 126.72 72.52 91.82 62.73 123.31 66.35 39.64 60.88 125.98 193.72 178.19 122.59 231.74 107.32 171.20 156.03 104.35 102.55 89.83 90.37 103.71 66.24 33 E4a_E5a KnownJunction 0 90.91 144.58 87.52 90.63 72.75 156.44 48.00 56.89 71.99 121.98 192.21 217.87 173.37 233.80 110.76 173.63 172.42 113.21 75.20 105.27 110.52 127.06 68.38 34 ER5a ExonRegion 0 55.82 127.45 86.83 103.35 74.58 135.04 73.11 47.92 73.71 116.27 196.10 148.81 111.51 222.58 110.60 186.31 168.47 103.49 95.19 101.24 102.70 119.11 70.48 35 E5a_E6a KnownJunction 0 81.13 151.42 126.75 126.19 115.87 175.69 108.33 76.52 61.60 132.54 186.68 107.13 91.88 290.01 192.97 200.89 224.50 99.61 116.90 94.21 84.82 158.90 120.11 36 E6_Aa NovelBoundary 0 10.00 19.86 9.96 12.52 4.33 18.80 25.39 13.92 10.59 11.50 0.00 21.61 25.97 11.83 8.90 28.71 27.12 1.91 4.52 40.01 2.78 5.88 0.00 37 ER6a ExonRegion 0 86.87 112.22 106.84 132.61 97.74 149.31 111.62 73.28 91.12 144.72 207.65 165.47 131.16 255.57 161.57 218.69 193.37 99.72 111.78 96.69 76.04 134.33 109.64 38 E6a_E7a KnownJunction 0 154.69 135.30 114.96 171.91 125.04 143.04 106.08 91.84 125.78 147.18 230.90 218.02 100.32 231.21 193.58 214.90 189.71 78.76 94.87 131.03 43.86 126.75 77.85 39 I6 Intron 0 14.81 28.73 11.64 17.26 13.73 19.48 12.91 9.02 9.44 13.89 9.91 20.12 19.24 8.67 5.61 11.52 8.25 5.53 5.97 14.36 1.38 11.46 5.14 40 I6_AR1 ActiveIntronRegion 0 15.04 29.23 11.84 17.56 13.89 19.82 13.12 9.14 9.60 14.12 10.08 20.47 19.58 8.82 5.71 11.69 8.40 5.62 6.08 14.60 1.40 11.65 5.23 41 ER7a ExonRegion 0 122.05 169.48 126.89 135.92 134.91 188.89 109.25 93.41 101.84 144.00 218.84 212.69 178.35 255.30 146.73 204.97 206.57 77.54 81.93 107.83 60.41 135.88 108.72 42 E7a_E8a KnownJunction 0 146.77 198.19 168.06 151.00 150.68 167.80 207.92 93.32 131.51 167.19 294.86 232.13 209.89 262.52 195.56 204.31 210.75 55.05 81.32 108.98 62.64 115.24 86.22 43 ER8a ExonRegion 0 144.99 199.95 125.16 147.43 124.93 180.74 129.53 88.30 109.87 151.13 259.42 237.93 228.95 284.67 193.85 260.27 199.08 84.66 121.80 103.23 54.55 139.93 99.44 44 E8a_E9a KnownJunction 0 168.40 182.66 144.11 145.77 151.19 218.68 144.72 90.69 97.77 161.12 240.22 151.55 209.73 268.53 221.40 216.10 225.15 108.77 148.15 121.12 51.58 111.38 128.73 45 ER9a ExonRegion 0 109.84 180.47 169.16 169.44 142.98 206.19 116.98 109.46 109.73 159.36 267.45 251.59 208.69 269.10 213.65 280.57 222.64 140.82 127.81 108.10 80.53 139.09 130.61 46 E9a_E10a KnownJunction 0 141.51 180.76 171.96 198.98 146.52 213.34 100.07 134.72 106.74 163.43 277.81 263.49 197.88 286.72 322.15 339.65 189.81 138.41 190.78 135.89 98.60 180.58 156.90 47 E9a_E11a NovelJunction 0 3.56 39.20 3.05 9.09 12.99 8.18 2.12 1.93 4.86 1.58 0.00 0.00 0.00 2.35 0.00 3.33 0.00 6.92 0.00 9.46 0.00 0.00 0.00 48 E10_Aa NovelBoundary 0 6.37 0.00 5.38 7.86 3.74 2.33 3.89 7.11 19.68 2.98 2.11 0.00 6.17 4.94 10.01 7.43 4.30 2.07 9.22 8.88 0.00 0.00 21.08 49 ER10a ExonRegion 0 147.89 202.28 205.65 214.16 135.36 207.67 110.42 121.89 100.36 155.67 260.41 218.22 226.49 289.63 227.40 283.57 232.34 167.79 149.74 102.87 114.77 137.59 108.28 50 E10a_E11a KnownJunction 0 240.41 253.57 216.93 216.62 158.49 299.43 135.58 113.36 124.30 170.17 229.64 188.76 272.71 276.77 238.71 268.90 185.51 178.95 113.42 74.34 126.33 110.04 55.06 51 ER11a ExonRegion 0 232.85 247.96 229.26 237.10 153.03 279.86 122.17 114.47 99.14 157.27 230.39 218.95 195.92 280.28 268.57 291.34 183.55 195.29 151.00 108.67 127.33 161.57 134.79 52 E11a_E12a KnownJunction 0 253.97 222.66 245.59 315.38 149.58 285.97 127.23 85.27 97.97 163.83 204.47 213.67 167.20 301.02 214.23 257.62 146.52 148.73 116.05 98.56 87.79 123.08 87.33 53 ER12a ExonRegion 0 227.97 246.99 204.60 273.84 154.34 303.10 151.63 87.21 99.22 172.99 248.44 230.90 219.93 288.87 306.13 248.08 196.95 145.33 129.15 105.42 114.99 146.95 112.30 54 E12a_E13a KnownJunction 0 238.86 259.16 219.98 264.70 153.14 384.21 160.53 115.01 102.63 176.11 203.79 239.78 189.27 316.91 383.34 243.53 206.08 162.08 179.30 147.97 139.56 166.86 112.34 55 ER13a ExonRegion 0 169.50 200.61 154.46 174.57 134.30 192.90 106.10 106.38 83.39 159.63 186.28 138.43 113.78 239.95 268.59 229.90 195.09 132.44 124.66 118.80 94.85 123.01 89.00 56 E13_Da KnownBoundary 1 124.76 198.85 168.92 168.48 193.04 211.24 169.50 84.74 82.84 145.97 118.40 130.84 80.51 163.93 363.81 164.66 153.25 77.35 140.62 127.32 61.34 118.85 72.39 57 ER13b ExonRegion 0 96.93 116.06 115.90 135.57 81.55 85.61 49.13 77.45 56.46 106.29 106.40 85.67 70.37 100.12 177.49 105.12 93.65 49.45 54.14 64.93 41.76 85.75 40.06 58 ER13c ExonRegion 0 13.38 22.53 7.25 2.02 3.42 18.34 2.01 8.71 0.00 6.01 1.55 11.08 2.81 1.69 1.04 1.19 0.00 0.00 2.80 3.66 0.00 1.67 2.82