Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TUBGCP4 Gene 0 63.44 154.43 78.06 126.31 105.86 209.23 121.69 132.18 140.29 154.59 169.24 134.58 91.38 155.33 104.01 118.86 127.16 188.25 140.27 188.89 52.32 56.60 62.87 2 399460 Transcript 0 22.31 31.00 18.09 31.33 13.67 34.36 19.52 34.03 18.39 44.84 84.74 49.23 49.47 66.25 41.05 75.77 64.61 112.39 32.06 74.92 32.51 9.51 29.59 3 260383 Transcript 0 50.16 63.61 19.66 67.86 26.74 96.71 52.77 49.54 38.92 97.72 128.98 130.39 121.10 135.15 95.80 125.01 105.38 157.81 112.76 137.81 38.80 18.98 44.56 4 IG25 Intergenic 0 3.03 7.99 9.50 7.98 5.96 17.23 12.79 9.57 15.63 17.87 20.82 10.23 11.20 29.79 11.95 27.77 27.15 40.70 24.34 32.74 16.83 9.95 15.43 5 IG25_AR1 ActiveIntergenicRegion 0 4.52 11.16 10.97 11.37 8.81 25.45 18.18 11.84 20.10 17.32 16.21 13.39 11.21 27.46 12.44 31.77 32.87 54.92 29.28 42.85 18.34 13.11 19.81 6 IG25_SR1 SilentIntergenicRegion 0 2.12 6.51 8.95 6.81 3.21 15.22 7.68 10.37 9.88 12.39 18.75 13.85 14.54 22.58 5.80 14.86 18.49 40.84 24.85 37.45 24.90 3.13 12.92 7 IG25_AR2 ActiveIntergenicRegion 0 1.74 5.46 9.24 5.16 3.54 10.05 8.42 8.32 12.85 21.53 29.79 7.94 12.89 37.55 13.21 27.67 24.77 29.96 22.23 25.60 17.24 7.87 12.65 8 ER1a ExonRegion 1 5.12 13.83 8.93 13.55 7.43 36.87 13.91 9.86 12.15 29.39 68.29 12.72 15.46 58.95 41.09 53.58 55.34 83.95 40.51 73.66 14.64 9.20 14.91 9 E1a_E2a KnownJunction 1 5.78 22.30 17.36 47.28 11.46 45.37 17.53 28.67 51.94 69.33 109.34 30.01 13.64 86.17 59.58 56.14 78.26 227.79 218.36 157.75 23.91 17.70 25.18 10 E2_Aa NovelBoundary 0 2.82 4.87 8.99 18.15 13.67 6.47 3.36 9.36 23.09 29.60 27.80 0.00 0.00 26.31 9.15 33.41 29.64 77.64 56.94 49.22 4.70 4.47 10.76 11 ER2a ExonRegion 1 9.04 43.76 29.31 43.54 34.37 96.40 33.86 32.61 43.24 74.20 139.08 30.21 32.79 129.09 70.15 88.75 94.04 153.98 86.45 128.58 30.99 21.92 27.91 12 E2a_E3a KnownJunction 1 30.75 68.21 25.87 33.73 33.79 92.39 51.41 45.06 51.91 98.91 145.83 30.61 32.47 120.73 51.05 69.04 72.74 117.23 35.86 88.91 23.78 31.17 32.44 13 ER3a ExonRegion 1 20.30 66.56 26.94 48.11 30.46 83.79 50.04 60.50 52.34 103.29 166.12 64.34 57.00 156.55 47.43 99.29 122.91 148.35 72.59 132.61 37.88 23.73 34.31 14 E3a_E4a KnownJunction 0 32.15 53.28 38.88 66.99 20.97 119.42 31.75 66.46 59.92 110.16 193.21 75.47 62.66 165.64 53.90 191.40 97.24 187.45 104.66 112.81 43.49 16.72 72.05 15 ER4a ExonRegion 0 21.60 54.12 36.74 67.64 20.37 91.49 42.10 55.47 59.77 120.23 187.49 68.15 51.76 169.03 63.40 163.19 137.17 193.09 84.94 117.81 35.42 25.54 49.05 16 E4a_E5a KnownJunction 1 19.78 68.74 30.01 64.66 27.42 82.45 73.53 47.15 51.88 111.32 175.83 105.48 80.68 193.71 50.68 156.20 113.23 142.52 100.61 132.95 29.84 32.45 41.15 17 ER5a ExonRegion 1 12.33 60.12 42.63 67.67 34.64 115.30 49.13 72.78 45.48 115.29 207.50 117.35 96.19 195.04 48.10 120.87 132.44 155.63 77.51 136.77 37.54 27.60 40.39 18 E5a_E6a KnownJunction 1 21.71 84.46 57.15 66.16 58.57 133.22 55.82 94.18 38.40 119.11 275.60 170.76 126.94 214.14 60.94 130.73 160.64 154.41 107.58 182.16 44.05 34.96 36.36 19 ER6a ExonRegion 0 14.37 75.75 43.91 66.78 26.32 102.49 53.82 75.71 46.16 105.11 233.54 166.74 76.92 194.67 67.16 122.90 144.87 179.37 88.67 149.97 46.39 18.02 45.92 20 E6a_E7a KnownJunction 1 22.67 107.55 36.96 71.85 20.03 100.34 46.90 63.58 57.61 93.43 178.94 184.11 87.66 167.87 63.91 192.34 84.06 204.12 127.53 97.47 37.68 27.80 69.40 21 E7_Aa NovelBoundary 0 0.00 0.00 24.04 8.86 0.00 4.54 2.25 4.89 9.11 3.14 2.63 17.71 13.15 0.00 0.00 3.42 0.00 2.11 4.80 0.00 0.00 0.00 0.00 22 ER7a ExonRegion 0 34.72 102.37 61.33 71.59 43.25 107.67 69.57 79.48 58.94 110.50 196.60 179.16 84.10 194.51 71.44 139.34 154.01 182.58 103.21 145.32 43.80 33.66 34.57 23 E7a_E8a KnownJunction 1 54.08 93.08 56.65 111.54 56.45 190.46 111.38 89.17 54.92 120.40 208.05 229.87 71.75 206.96 106.56 174.40 152.97 209.42 194.83 156.34 45.53 43.48 42.85 24 ER8a ExonRegion 1 33.34 100.01 52.96 95.71 59.46 153.44 102.40 78.49 54.21 141.01 190.43 213.21 68.43 207.81 95.08 154.69 149.61 207.83 128.39 164.73 44.21 35.33 37.40 25 E8_Da NovelBoundary 0 0.00 12.70 26.58 20.74 0.00 0.00 2.25 15.40 8.59 1.64 10.00 12.45 5.84 0.00 4.45 7.60 9.16 11.15 26.07 3.26 0.00 0.00 0.00 26 E8a_E9a KnownJunction 0 18.08 112.55 55.56 113.07 65.45 161.95 140.83 68.47 65.88 163.80 178.78 244.58 184.40 219.26 130.54 182.69 163.25 250.63 177.13 198.27 32.74 58.23 46.78 27 ER9a ExonRegion 0 22.57 96.29 48.38 81.11 38.94 95.12 64.12 58.41 56.88 126.88 212.97 170.23 80.11 191.23 119.53 156.10 146.64 221.82 116.74 156.00 51.11 49.55 34.32 28 E9a_E10a KnownJunction 1 48.45 95.84 54.26 73.58 19.44 87.73 77.06 40.13 46.15 116.77 195.79 223.27 46.59 173.82 131.90 165.94 189.90 209.05 107.49 177.82 53.00 30.98 37.99 29 ER10a ExonRegion 0 21.70 92.75 63.74 64.83 37.36 124.59 112.33 59.92 63.57 138.21 277.05 175.30 71.36 228.65 127.48 178.21 182.00 218.47 119.98 165.71 65.03 42.16 49.06 30 E10a_E11a KnownJunction 0 20.67 115.37 62.53 62.13 90.32 112.66 123.70 86.87 70.98 138.98 313.61 111.94 85.06 241.63 170.84 200.37 172.79 197.28 138.45 173.22 70.92 50.82 48.66 31 ER11a ExonRegion 0 49.74 131.42 71.09 144.00 70.50 186.63 147.93 102.14 80.57 181.96 296.88 231.18 149.15 232.75 196.35 213.57 196.43 335.82 173.60 227.46 70.46 61.27 47.71 32 E11a_E12a KnownJunction 0 41.49 110.51 68.77 138.84 45.67 194.15 102.24 76.69 73.76 172.00 281.49 180.81 112.98 213.96 214.85 177.30 124.26 279.64 152.66 194.56 55.72 56.40 27.40 33 ER12a ExonRegion 0 42.45 103.94 58.68 106.52 46.26 117.04 81.86 77.19 63.92 155.46 245.94 181.96 122.81 209.68 146.38 184.77 192.58 269.09 150.51 205.02 56.21 38.93 57.40 34 E12a_E13a KnownJunction 0 21.34 27.43 15.97 25.87 10.61 24.25 14.88 27.44 13.31 32.91 71.39 31.36 33.28 49.27 28.43 60.16 44.23 88.50 8.38 61.55 28.11 6.00 28.34 35 E12a_E13b KnownJunction 0 50.16 63.61 19.66 67.86 26.74 96.71 52.77 49.54 38.92 97.72 128.98 130.39 121.10 135.15 95.80 125.01 105.38 157.81 112.76 137.81 38.80 18.98 44.56 36 ER13a ExonRegion 0 23.28 34.57 20.22 36.80 16.72 44.47 24.16 40.62 23.47 56.77 98.09 67.11 65.66 83.24 53.67 91.39 85.00 136.27 55.74 88.30 36.91 13.02 30.83 37 ER13b ExonRegion 0 34.26 88.95 47.35 91.74 48.98 119.69 89.32 81.09 58.57 137.35 196.86 164.27 103.93 179.75 149.46 135.86 150.33 245.11 145.05 163.20 47.09 38.48 51.94 38 E13a_E14a KnownJunction 0 28.75 91.56 31.02 81.24 63.24 114.37 110.67 65.06 45.11 98.74 199.58 165.20 88.31 144.98 67.37 91.60 105.10 211.45 104.10 163.31 29.34 26.15 28.68 39 I13_AR2 ActiveIntronRegion 1 3.36 11.27 3.23 9.52 9.17 8.82 9.98 4.53 4.02 10.56 13.38 48.31 14.67 17.87 24.41 17.69 15.93 3.08 4.70 16.01 0.00 5.99 9.28 40 ER14a ExonRegion 0 48.17 101.98 64.45 84.25 57.29 145.20 84.60 84.10 57.36 122.99 234.56 158.20 121.76 185.57 137.81 137.62 142.01 226.59 134.98 181.88 34.17 35.74 56.52 41 E14a_E15a KnownJunction 0 51.12 117.48 92.28 89.13 60.19 177.28 98.35 102.64 64.79 139.79 257.91 208.72 85.55 200.84 127.57 145.26 171.67 225.51 110.69 197.57 29.47 57.38 49.25 42 ER15a ExonRegion 0 51.36 106.65 80.07 87.87 47.41 122.17 67.89 96.59 52.55 123.23 226.68 115.93 105.30 194.74 167.37 141.43 165.44 233.76 150.68 182.85 47.71 37.60 48.38 43 E15a_E16a KnownJunction 0 48.75 111.03 78.29 94.83 49.92 156.50 79.23 72.70 52.43 135.25 228.48 106.38 96.10 190.95 114.47 116.38 129.50 168.55 195.86 141.13 48.80 34.35 24.50 44 I15 Intron 0 17.86 57.60 16.12 29.42 28.72 45.25 32.16 27.77 28.96 20.66 14.10 22.26 16.32 11.69 14.08 14.25 14.93 18.57 32.44 35.93 11.03 14.64 18.07 45 I15_AR1 ActiveIntronRegion 0 17.90 57.71 16.15 29.48 28.77 45.34 32.23 27.83 29.02 20.70 14.13 22.31 16.36 11.72 14.11 14.27 14.96 18.61 32.51 36.00 11.05 14.66 18.10 46 E16_Aa NovelBoundary 0 296.50 657.65 226.40 343.15 363.92 602.78 250.18 508.74 560.35 250.76 23.69 31.96 13.64 52.15 56.62 45.54 60.68 252.74 177.04 257.20 125.04 81.62 89.03 47 ER16a ExonRegion 0 111.45 361.96 140.45 199.48 243.61 520.25 191.25 247.76 209.40 198.71 216.58 138.47 111.96 181.03 132.34 124.22 167.64 259.59 214.05 241.50 105.16 86.72 105.37 48 E16_Da NovelBoundary 0 142.47 499.45 169.33 281.88 154.50 453.83 180.10 332.12 377.60 223.03 34.64 49.07 26.13 30.61 35.48 36.32 25.81 181.11 153.13 145.22 90.50 95.22 78.62 49 E16a_E17a KnownJunction 0 6.59 36.77 38.44 43.78 18.85 88.81 29.94 48.30 38.45 78.89 73.81 95.58 95.77 123.02 91.48 48.11 72.18 118.47 67.30 100.93 22.92 11.57 23.39 50 I16 Intron 0 138.90 268.84 145.85 249.04 231.97 403.30 192.55 308.31 348.23 183.69 42.45 34.58 28.96 28.88 25.84 42.54 36.80 119.82 140.47 144.45 50.03 81.12 75.01 51 I16_AR1 ActiveIntronRegion 0 139.34 269.71 146.32 249.85 232.72 404.58 193.17 309.30 349.35 184.28 42.59 34.69 29.05 28.97 25.91 42.68 36.92 120.21 140.89 144.92 50.20 81.39 75.25 52 E17_Aa NovelBoundary 0 63.94 242.98 64.34 159.19 200.68 297.61 146.44 192.92 240.04 136.67 15.37 25.66 6.82 19.07 18.54 31.62 39.36 89.58 73.23 79.70 42.38 57.13 50.02 53 ER17a ExonRegion 0 95.91 200.21 124.94 187.53 217.92 388.77 178.12 216.44 218.91 200.87 221.77 108.86 103.11 188.17 152.25 118.99 142.93 186.72 236.79 226.69 76.82 87.70 91.08 54 E17_Da NovelBoundary 0 64.01 277.91 80.51 171.64 179.71 361.21 184.82 285.26 326.39 209.47 31.22 44.86 26.78 21.78 24.60 14.87 35.16 134.06 113.70 108.53 62.15 42.07 68.03 55 E17a_E18a KnownJunction 0 84.76 74.13 48.93 87.30 71.82 65.76 63.11 56.07 42.01 112.28 128.77 110.14 118.82 113.66 87.15 135.43 117.91 90.78 78.87 108.40 27.92 34.72 56.51 56 I17 Intron 0 50.28 133.02 44.61 92.83 133.43 273.77 120.43 150.81 174.90 96.97 18.06 28.90 18.42 15.66 11.49 12.72 16.35 50.52 70.64 71.86 20.09 53.25 40.00 57 I17_AR1 ActiveIntronRegion 0 50.50 133.58 44.81 93.24 134.02 274.96 120.96 151.47 175.65 97.40 18.14 28.98 18.50 15.73 11.54 12.78 16.42 50.74 70.94 72.17 20.17 53.48 40.18 58 E18_Aa NovelBoundary 0 67.49 207.73 112.59 192.65 153.06 433.73 140.22 331.88 333.19 198.64 23.22 52.97 26.95 23.84 23.73 20.85 29.36 47.09 61.46 136.21 24.65 75.50 25.27 59 ER18a ExonRegion 0 136.45 300.04 138.26 240.17 227.61 380.68 236.18 265.78 334.36 250.53 112.58 157.19 122.02 118.78 104.92 96.62 103.60 171.50 194.55 272.83 69.91 108.13 110.34 60 IG26 Intergenic 0 100.44 265.41 116.57 200.85 184.02 340.06 220.09 215.65 267.85 224.00 114.73 113.89 80.85 100.53 101.78 96.11 92.48 164.42 195.08 242.80 63.44 94.84 90.90 61 IG26_AR1 ActiveIntergenicRegion 0 100.55 265.69 116.70 201.06 184.22 340.43 220.32 215.89 268.14 224.24 114.85 114.02 80.93 100.64 101.89 96.21 92.58 164.60 195.29 243.06 63.51 94.95 91.00