Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RPLP1 Gene 0 583.82 1012.38 3946.76 1920.99 393.36 931.37 427.38 1063.94 523.66 1284.41 3351.94 426.25 363.76 2090.91 4011.06 2701.74 4023.99 1389.39 2029.29 1144.20 3047.87 1781.42 1562.33 2 260379 Transcript 1 26.20 159.19 5799.14 3399.04 136.74 80.66 40.21 1576.16 747.99 1538.13 2124.01 386.26 212.72 1872.00 5509.91 6525.00 2129.51 2881.24 2806.08 1432.74 2292.15 2406.78 3977.44 3 357790 Transcript 1 0.00 19.21 899.61 558.14 3.82 5.56 2.25 72.00 44.33 227.49 204.58 0.00 15.10 117.43 212.37 92.63 232.91 344.60 258.36 345.15 63.07 23.64 31.07 4 487304 Transcript 0 0.00 0.00 1.32 0.71 0.00 0.00 0.44 0.94 0.67 1.00 1.79 0.76 0.97 2.17 3.72 1.19 1.94 0.90 0.19 0.08 1.07 0.97 1.59 5 488122 Transcript 1 77.60 29.49 105.07 84.44 39.62 25.37 27.87 38.47 26.43 36.27 96.48 90.31 37.06 105.77 163.49 138.35 75.18 33.01 43.18 34.34 38.83 71.91 89.03 6 ER1a ExonRegion 0 0.24 3.49 1.37 0.16 0.08 0.84 5.64 0.25 0.60 0.26 12.09 0.00 0.67 12.81 9.37 13.76 19.15 0.53 6.28 1.95 5.67 5.00 4.61 7 E1_Ab KnownBoundary 0 3.33 0.00 1.83 0.00 0.00 7.84 5.96 0.00 0.00 0.00 2.58 0.00 0.00 7.00 4.45 14.95 13.74 2.32 4.42 0.00 0.00 5.88 4.10 8 E1_Ac KnownBoundary 0 0.00 3.16 1.30 0.00 0.00 2.38 0.00 0.00 1.10 1.32 4.95 0.00 0.00 10.24 10.75 14.87 11.97 1.74 4.52 0.00 5.00 13.66 3.59 9 ER1b ExonRegion 0 2.12 18.30 12.25 2.73 2.68 11.00 7.94 3.46 6.18 8.03 23.19 0.00 9.38 45.48 49.32 35.67 42.91 7.39 31.85 10.64 17.63 10.42 11.75 10 ER1c ExonRegion 0 2096.15 3497.87 10149.70 4843.55 1184.62 3168.94 1458.60 2878.96 1467.64 3546.92 12404.56 998.10 1249.00 5180.75 9686.52 7850.14 16940.95 4873.67 6233.88 3718.33 11530.46 3136.06 4954.23 11 E1a_E2a KnownJunction 1 35.41 209.50 20730.82 8176.92 372.58 490.68 195.07 5669.20 2639.99 6967.72 27894.27 647.76 665.38 14341.76 21814.75 9821.10 40385.74 3566.65 15464.26 8340.11 24277.21 5301.90 7563.94 12 E1a_E3b KnownJunction 1 0.00 19.21 899.61 558.14 3.82 5.56 2.25 72.00 44.33 227.49 204.58 0.00 15.10 117.43 212.37 92.63 232.91 344.60 258.36 345.15 63.07 23.64 31.07 13 ER2a ExonRegion 1 32.62 236.65 19355.08 9893.87 290.84 216.31 77.07 5356.34 2452.26 6029.09 12987.89 1346.87 567.49 10643.11 19184.79 14695.30 15312.50 7115.17 11164.36 5258.76 11544.12 7657.04 8668.23 14 E2_Da KnownBoundary 0 2.82 21.18 37.55 26.64 19.86 13.17 14.44 11.95 9.29 8.73 22.16 56.27 21.26 24.19 24.60 22.73 8.04 14.18 0.00 9.01 18.66 23.09 0.00 15 E2a_E3b KnownJunction 1 71.42 468.01 17377.92 10177.43 400.34 234.92 109.74 4720.43 2237.97 4597.02 6342.76 1143.52 634.37 5596.83 16510.46 19547.35 6357.17 8630.39 8395.25 4287.18 6860.07 7203.20 11918.06 16 ER2b ExonRegion 0 0.00 0.00 1.32 0.71 0.00 0.00 0.44 0.94 0.67 1.00 1.79 0.76 0.97 2.17 3.72 1.19 1.94 0.90 0.19 0.08 1.07 0.97 1.59 17 I2 Intron 0 58.55 26.15 26.43 27.00 39.32 29.33 28.47 14.47 12.53 13.67 46.99 90.21 46.32 62.01 70.68 52.99 39.23 7.35 14.80 13.79 9.77 43.90 31.10 18 I2_AR1 ActiveIntronRegion 0 58.55 26.15 26.43 27.00 39.32 29.33 28.47 14.47 12.53 13.67 46.99 90.21 46.32 62.01 70.68 52.99 39.23 7.35 14.80 13.79 9.77 43.90 31.10 19 E3_Aa NovelBoundary 1 85.94 29.07 63.21 63.83 51.10 42.19 23.45 27.52 23.67 21.49 43.91 186.06 93.50 55.04 114.59 46.74 55.54 10.24 13.27 17.96 19.77 64.48 32.18 20 ER3a ExonRegion 0 77.60 29.49 105.07 84.44 39.62 25.37 27.87 38.47 26.43 36.27 96.48 90.31 37.06 105.77 163.49 138.35 75.18 33.01 43.18 34.34 38.83 71.91 89.03 21 E3_Ab KnownBoundary 0 72.38 28.22 52.01 58.17 20.46 8.52 27.25 37.71 24.94 14.24 66.02 31.66 27.60 62.22 125.22 76.05 45.72 11.57 0.00 18.47 10.63 44.46 40.38 22 ER3b ExonRegion 0 86.36 1790.49 12476.43 5693.38 1736.72 3447.64 1480.69 3141.13 1540.38 3957.53 7084.11 1058.68 671.60 5157.26 11711.14 7122.97 6495.91 3204.49 4758.25 2939.65 6494.75 8739.58 3556.70 23 E3a_E4a KnownJunction 0 409.18 11006.66 9884.16 5336.48 2373.01 10337.17 5246.22 2336.91 1115.64 2840.95 5821.16 711.68 540.71 2894.59 6562.85 2596.75 6569.60 870.52 2574.85 2008.34 7305.23 3626.00 1240.58 24 ER4a ExonRegion 1 3202.57 4334.74 5806.22 2954.56 741.95 2305.09 1114.68 1420.98 712.16 1715.01 4138.86 1313.83 1168.01 4465.20 8090.67 2758.71 3779.08 818.03 2143.91 1242.28 3591.47 2612.72 1312.51 25 E4_Da KnownBoundary 0 27.93 20.19 28.24 27.34 16.64 17.15 21.15 7.60 8.28 22.32 31.53 11.70 0.00 12.48 13.23 22.64 31.60 7.50 6.96 8.05 8.34 25.17 10.16 26 ER4b ExonRegion 0 6.95 6.08 18.13 19.53 9.81 6.23 5.26 7.80 5.39 17.10 17.17 15.27 3.12 6.36 9.91 13.90 12.21 12.81 16.69 9.09 10.71 12.13 9.65 27 IG39_AR1 ActiveIntergenicRegion 0 2.39 4.59 7.41 8.72 4.23 2.07 5.38 6.41 4.15 8.13 7.40 2.30 1.74 4.87 9.82 8.72 7.45 3.11 5.75 7.20 4.48 7.51 9.94