Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KIF23 Gene 0 56.08 112.73 74.98 44.86 71.95 67.66 172.78 58.56 16.87 100.67 210.78 202.86 100.92 225.16 114.24 151.24 189.29 155.40 37.95 123.20 8.63 37.11 15.70 2 260363 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 352331 Transcript 0 103.80 36.05 31.76 25.60 102.04 45.26 141.67 59.43 6.31 45.80 216.21 195.66 132.95 200.48 109.52 258.39 158.20 91.28 13.27 30.42 17.54 30.07 19.80 4 395392 Transcript 0 0.00 0.63 1.04 0.26 0.21 0.00 0.56 0.40 0.05 0.09 0.07 1.83 0.36 1.25 0.67 0.46 0.45 0.00 0.49 1.31 0.00 0.08 0.11 5 ER1a ExonRegion 0 4.08 14.49 3.97 0.84 13.82 28.27 65.62 3.00 3.31 9.65 34.49 5.31 12.42 50.44 11.97 36.78 42.58 60.72 3.06 31.82 2.17 6.36 3.51 6 E1a_E3a KnownJunction 0 7.56 16.64 12.60 2.00 8.66 14.20 23.85 10.68 1.79 12.49 72.76 30.01 39.12 62.04 11.50 36.49 90.23 75.69 20.99 61.42 3.15 6.06 23.13 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.90 0.00 0.00 0.00 0.00 0.00 0.00 8 ER3a ExonRegion 1 4.08 18.91 19.59 5.43 9.59 13.47 23.91 17.46 5.73 24.17 135.08 25.17 28.54 142.34 39.75 78.00 139.58 122.66 24.53 72.37 6.83 21.82 23.83 9 E3a_E4a KnownJunction 1 3.78 37.16 19.81 12.89 0.00 7.78 13.07 27.07 9.87 38.68 174.31 56.27 6.82 209.78 58.35 121.25 134.08 154.87 17.32 72.35 8.77 36.31 20.40 10 ER4a ExonRegion 1 6.73 38.09 19.48 10.46 19.91 34.43 80.94 26.65 8.62 49.24 165.57 58.67 53.04 141.98 29.60 100.52 127.79 132.89 18.64 103.73 4.07 21.48 21.24 11 E4a_E5a KnownJunction 1 3.78 80.91 16.74 14.48 82.17 115.33 280.43 36.15 12.56 68.66 233.53 99.33 80.84 154.16 28.56 123.04 168.12 121.29 22.97 117.10 2.84 28.35 46.52 12 ER5a ExonRegion 1 15.37 95.58 12.29 18.73 45.46 67.87 168.09 29.06 11.33 58.80 211.40 173.30 81.28 223.12 50.72 93.54 178.28 104.22 34.83 117.48 9.73 31.59 13.30 13 E5a_E6a KnownJunction 1 25.19 79.33 17.92 25.01 16.72 30.21 127.76 26.25 4.51 59.88 194.73 123.64 93.50 220.32 25.96 72.29 145.21 64.87 18.54 159.35 3.15 38.82 16.39 14 E5a_E7a NovelJunction 0 0.00 0.00 7.78 0.00 0.00 0.00 0.00 0.00 1.79 0.00 17.32 11.40 0.00 0.00 0.00 0.00 9.16 0.00 0.00 0.00 0.00 0.00 0.00 15 ER6a ExonRegion 1 12.67 64.93 30.71 29.20 30.57 43.81 113.81 33.52 11.69 77.09 194.86 231.42 94.35 229.59 42.10 120.12 181.72 103.50 26.53 132.95 13.61 29.75 14.10 16 E6a_E7a KnownJunction 1 28.67 83.67 39.21 40.75 22.75 47.76 121.49 39.84 6.74 62.72 165.15 215.02 93.34 241.27 46.73 126.63 144.37 61.35 17.22 142.15 6.18 33.43 8.54 17 ER7a ExonRegion 1 14.35 93.86 32.76 24.02 37.97 40.18 139.71 31.96 8.06 87.32 215.99 193.17 68.94 218.09 39.69 123.75 184.88 65.14 40.19 126.54 5.87 31.82 9.37 18 E7a_E8a KnownJunction 1 16.23 103.86 35.66 18.81 42.53 59.68 156.42 33.27 11.40 98.83 177.83 184.11 60.39 197.54 38.20 168.33 173.91 58.37 15.44 126.94 8.77 33.31 12.63 19 ER8a ExonRegion 1 19.40 53.84 34.22 24.49 44.55 43.71 140.27 44.78 12.78 108.27 198.56 221.99 84.01 196.83 42.31 126.45 155.51 56.21 36.27 100.46 2.05 35.57 8.28 20 E8a_E9a KnownJunction 0 21.49 17.76 15.17 20.38 33.19 21.92 101.66 56.23 11.08 99.58 90.81 154.10 58.44 121.37 49.32 92.45 132.02 53.56 3.86 62.38 0.00 5.08 0.00 21 I8_AR1 ActiveIntronRegion 0 0.00 1.02 5.95 0.68 0.00 20.08 20.93 7.49 0.00 3.90 16.75 18.97 12.95 22.93 5.25 9.20 21.30 6.73 1.29 18.29 0.00 3.47 6.99 22 ER9a ExonRegion 1 21.63 30.25 29.40 23.24 48.71 58.89 141.46 46.64 14.33 100.77 202.95 203.83 94.71 215.58 37.64 129.41 217.80 75.30 38.28 92.58 4.50 38.37 9.90 23 E9a_E10a KnownJunction 1 17.78 34.93 33.17 30.43 36.42 33.56 164.02 53.72 12.93 102.10 173.99 239.33 39.93 239.45 69.10 129.71 241.51 100.57 3.76 116.39 3.15 46.66 21.34 24 ER10a ExonRegion 0 21.51 66.02 38.98 25.78 40.44 71.77 166.30 40.04 14.29 89.77 238.17 232.58 92.15 248.73 76.15 150.82 254.49 128.99 37.57 127.00 8.45 41.28 20.80 25 E10a_E11a KnownJunction 1 23.41 70.97 47.13 19.34 81.75 87.34 200.94 29.37 10.33 79.22 214.32 211.87 115.90 241.80 53.90 98.78 222.72 99.32 36.33 82.77 9.27 19.04 7.85 26 ER11a ExonRegion 0 28.99 54.59 41.39 32.38 61.26 82.31 165.83 48.53 14.86 86.64 264.06 252.29 119.98 303.30 83.29 174.55 272.34 181.47 51.58 140.09 8.47 36.94 20.50 27 E11a_E12a KnownJunction 0 30.38 54.46 53.64 51.41 57.30 75.24 156.47 48.88 16.70 85.13 284.44 178.11 99.02 299.78 83.44 127.32 243.57 178.58 43.95 164.65 11.18 43.60 16.65 28 ER12a ExonRegion 0 31.54 73.26 51.82 30.95 68.80 75.58 153.83 57.99 21.35 84.81 287.95 204.35 70.53 267.21 98.61 134.75 226.48 167.06 46.67 140.11 7.05 35.42 15.89 29 E12a_E13a KnownJunction 0 31.49 96.82 58.07 24.54 35.06 48.27 177.18 86.50 25.72 94.55 263.44 266.19 86.84 320.62 123.00 181.32 231.98 170.25 27.11 124.38 11.92 33.31 16.13 30 ER13a ExonRegion 0 50.85 120.96 64.09 39.14 61.59 96.37 199.39 64.15 18.37 101.97 291.40 315.80 112.25 343.23 99.32 178.72 254.31 251.14 46.82 141.03 13.41 35.54 24.79 31 E13a_E14a KnownJunction 1 54.45 164.12 60.41 35.93 68.42 124.76 286.70 70.77 28.50 90.01 320.77 336.56 60.22 325.86 104.70 197.73 247.50 209.42 54.03 183.63 20.76 35.82 21.85 32 ER14a ExonRegion 0 46.44 125.02 77.01 35.33 85.41 88.11 207.36 67.17 17.54 101.49 275.50 315.21 100.99 351.43 123.61 214.66 261.86 267.28 56.62 151.03 19.23 37.39 21.65 33 E14a_E15a KnownJunction 0 63.27 131.88 93.73 55.64 133.28 119.93 254.60 69.70 20.05 121.55 304.76 316.75 195.93 380.25 127.57 223.19 296.68 269.94 94.12 187.60 25.95 65.34 27.66 34 ER15a ExonRegion 0 48.95 141.62 84.86 53.68 82.11 95.89 232.66 63.99 20.66 116.59 263.26 286.75 135.24 335.20 127.73 202.70 259.84 219.37 39.99 164.87 13.94 42.73 20.57 35 E15a_E16a KnownJunction 0 55.71 225.09 103.78 83.24 117.15 126.12 360.41 68.68 18.55 135.30 252.64 242.78 124.34 268.41 96.79 155.43 231.70 152.80 70.21 166.50 2.47 40.29 4.01 36 ER16a ExonRegion 0 80.23 161.27 98.67 69.71 98.29 89.31 242.25 64.51 24.23 132.44 228.94 282.43 189.44 297.47 128.98 174.77 193.46 156.99 33.31 143.23 5.90 52.19 17.32 37 E16a_E17a KnownJunction 0 77.05 173.06 114.69 77.15 95.84 117.83 255.00 62.60 29.08 129.10 278.70 281.49 181.81 331.75 113.60 189.01 208.13 143.14 47.06 149.89 6.30 51.68 4.01 38 ER17a ExonRegion 0 70.78 127.20 104.32 63.08 92.84 67.37 207.68 62.07 28.55 128.62 250.78 342.72 177.25 277.00 121.17 188.08 251.32 173.60 36.65 139.74 10.84 37.31 20.32 39 E17a_E18a KnownJunction 0 38.82 125.77 95.80 45.08 99.24 108.29 203.19 46.87 29.57 130.20 218.27 371.22 162.65 356.88 138.08 278.13 279.48 179.16 39.15 121.00 5.62 43.90 22.71 40 ER18a ExonRegion 0 61.57 125.89 89.51 48.71 83.20 80.54 200.37 68.93 26.56 127.06 276.59 335.12 135.88 285.59 161.33 266.05 265.89 255.88 56.22 139.79 14.18 43.22 21.62 41 E18a_E19a KnownJunction 0 21.19 109.32 59.43 47.45 34.89 55.25 168.88 40.83 22.22 106.19 200.58 167.15 61.68 101.89 56.49 114.07 147.73 137.92 17.98 96.13 0.00 13.96 11.95 42 E18a_E20a KnownJunction 0 103.80 36.05 31.76 25.60 102.04 45.26 141.67 59.43 6.31 45.80 216.21 195.66 132.95 200.48 109.52 258.39 158.20 91.28 13.27 30.42 17.54 30.07 19.80 43 ER19a ExonRegion 0 26.84 90.36 60.11 32.90 33.01 45.97 110.23 37.57 14.10 79.81 145.58 98.23 43.13 96.64 57.36 116.67 118.06 220.64 39.14 120.61 7.20 18.68 12.09 44 E19a_E20a KnownJunction 1 36.67 76.57 58.57 35.23 29.29 66.67 172.85 26.90 12.41 81.90 182.47 26.41 44.64 93.18 76.77 134.24 141.75 247.64 19.01 127.96 14.83 28.17 7.85 45 E20_Aa NovelBoundary 0 13.71 11.31 9.70 8.96 30.05 5.56 44.34 9.98 4.69 26.51 17.27 18.01 25.97 12.89 9.64 38.88 7.48 18.24 24.94 34.77 0.00 7.65 3.59 46 ER20a ExonRegion 0 103.99 122.55 112.95 59.23 72.22 85.52 194.80 67.47 15.09 117.32 264.90 184.74 105.36 286.69 186.03 235.60 243.17 231.09 51.80 150.35 17.03 40.59 18.67 47 E20a_E21a KnownJunction 0 125.50 183.26 138.70 77.11 117.74 152.92 235.78 90.20 16.49 129.26 282.60 221.02 130.67 258.40 205.45 225.41 216.64 205.53 52.61 178.01 10.38 42.01 16.39 48 ER21a ExonRegion 0 110.90 158.35 145.88 77.14 139.75 131.57 280.93 80.11 14.78 126.66 303.19 190.86 139.23 323.06 192.36 223.05 252.06 192.14 60.83 153.50 13.81 52.92 24.41 49 E21_Da NovelBoundary 0 0.00 8.55 10.11 18.98 23.09 0.00 53.88 8.46 1.16 17.65 7.32 12.60 0.00 12.60 10.75 3.93 4.39 1.78 8.85 23.71 0.00 0.00 4.35 50 E21a_E22a KnownJunction 0 86.90 112.61 142.46 78.44 129.80 128.51 231.50 93.11 20.49 128.08 239.69 206.62 143.82 238.74 186.79 159.45 286.40 182.60 34.73 116.20 19.77 54.19 28.26 51 E21a_E23a NovelJunction 0 3.78 0.00 4.55 3.10 0.00 0.00 11.70 3.86 0.00 5.72 13.90 6.30 0.00 12.54 9.02 3.67 3.74 6.47 4.24 11.57 0.00 0.00 3.76 52 ER22a ExonRegion 0 81.15 102.42 121.75 70.57 60.17 76.21 196.83 82.35 14.26 114.93 277.91 219.69 111.76 234.74 214.20 191.16 238.59 225.74 46.19 139.21 15.88 40.30 16.94 53 E22_Da NovelBoundary 0 28.15 20.33 5.85 12.49 14.18 5.28 57.85 9.20 7.47 24.44 22.16 36.61 12.99 27.90 9.27 7.69 20.57 4.68 4.61 2.43 0.00 3.00 3.76 54 E22a_E23a KnownJunction 0 81.72 105.31 134.38 79.71 36.67 56.10 226.33 75.62 13.69 110.59 249.38 168.05 127.26 149.51 175.04 126.80 210.19 192.43 51.01 157.94 11.37 29.88 10.84 55 I22 Intron 0 21.97 24.80 10.49 11.67 18.88 17.93 48.05 7.79 2.60 19.81 21.24 9.73 9.19 22.21 13.35 14.68 13.97 15.66 2.25 15.44 0.22 6.09 1.18 56 I22_AR1 ActiveIntronRegion 0 22.06 24.90 10.53 11.71 18.95 18.00 48.24 7.82 2.61 19.89 21.32 9.77 9.23 22.30 13.40 14.74 14.03 15.72 2.26 15.50 0.22 6.11 1.19 57 E23_Aa NovelBoundary 0 18.08 14.14 34.92 17.25 15.20 10.68 43.19 25.30 2.55 23.83 17.37 0.00 0.00 20.37 18.17 17.52 13.00 15.09 9.41 9.01 2.35 5.14 8.11 58 ER23a ExonRegion 0 78.22 162.37 131.43 86.94 56.34 68.37 186.73 83.87 18.74 142.52 243.25 143.54 107.74 267.27 232.43 191.97 236.18 192.06 67.16 181.06 13.16 41.05 19.32 59 E23a_E24a KnownJunction 1 96.17 151.09 131.31 78.15 99.41 96.82 255.22 95.70 23.09 141.40 306.18 183.96 60.87 224.91 209.04 140.90 248.06 198.40 45.55 185.36 26.44 58.66 21.43 60 ER24a ExonRegion 0 114.33 199.83 123.63 71.67 138.43 73.26 216.66 98.14 21.91 127.04 165.67 184.83 114.65 177.75 193.89 113.38 130.65 93.46 28.53 104.32 2.71 50.85 11.22 61 E24_Da NovelBoundary 0 14.45 70.38 19.43 10.42 26.66 19.82 76.18 14.17 4.40 15.55 4.00 34.51 18.67 8.71 36.71 13.42 14.59 1.53 0.00 22.12 0.00 7.10 0.00 62 I24_AR4 ActiveIntronRegion 1 2.12 0.00 0.00 0.00 4.86 0.00 1.08 0.00 0.00 0.00 5.62 0.00 0.00 11.07 32.18 46.20 17.70 0.00 0.00 0.00 2.00 0.00 0.00 63 I24_SR5 SilentIntronRegion 1 1.47 0.00 0.00 0.00 5.35 0.00 0.51 0.00 0.00 0.00 5.58 0.00 0.00 7.04 23.94 40.54 14.58 0.00 0.00 0.00 2.20 0.00 0.00 64 ER25a ExonRegion 0 0.00 1.25 2.07 0.52 0.41 0.00 1.12 0.80 0.10 0.18 0.15 3.66 0.72 2.50 1.34 0.91 0.00 0.00 0.98 2.62 0.00 0.16 0.23