Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DUT Gene 0 212.92 522.41 313.36 283.23 309.62 316.27 336.08 367.16 145.36 383.56 595.02 326.35 101.84 460.62 417.25 265.29 319.09 241.65 206.86 392.02 57.57 150.49 63.48 2 450740 Transcript 1 178.77 163.39 37.28 48.45 126.91 359.45 130.32 65.10 57.03 34.73 132.19 0.00 0.00 129.67 87.77 94.93 66.20 163.41 92.05 72.29 89.95 100.06 109.95 3 331200 Transcript 0 35.81 31.31 5.99 1.11 3.93 53.09 19.52 0.58 1.24 2.68 4.26 1.44 0.00 15.69 7.74 1.98 1.10 7.39 2.01 6.04 4.33 2.08 5.26 4 249783 Transcript 0 1.59 3.06 22.75 21.14 0.00 4.23 2.14 10.15 7.28 9.75 6.32 0.00 0.00 1.44 0.00 2.14 2.34 47.96 2.16 10.80 4.45 0.00 2.13 5 455976 Transcript 1 259.16 362.02 132.28 59.01 191.04 403.91 476.26 86.56 28.31 124.18 475.13 15.77 2.69 718.46 440.13 672.08 412.19 562.74 322.57 287.23 27.43 45.22 58.24 6 ER1a ExonRegion 0 105.03 106.91 12.98 16.33 59.11 209.09 88.75 22.32 20.36 15.89 76.18 0.00 0.00 64.96 32.28 47.93 37.84 59.99 46.36 26.48 39.51 36.76 45.41 7 E1_Da KnownBoundary 0 164.25 170.50 17.24 45.45 56.71 328.67 126.08 23.04 14.99 7.76 23.80 0.00 0.00 18.13 14.59 24.10 16.83 110.89 25.60 15.28 12.05 9.19 15.45 8 E1a_E2b KnownJunction 1 178.77 163.39 37.28 48.45 126.91 359.45 130.32 65.10 57.03 34.73 132.19 0.00 0.00 129.67 87.77 94.93 66.20 163.41 92.05 72.29 89.95 100.06 109.95 9 ER1b ExonRegion 0 84.15 81.73 1.23 0.59 11.79 121.68 49.06 0.00 0.00 1.15 0.21 0.00 0.00 3.20 0.00 0.00 0.00 5.54 2.84 1.09 1.97 0.00 2.06 10 E1_Ab KnownBoundary 0 67.94 20.65 24.10 43.98 15.62 137.02 41.07 23.49 14.93 13.22 9.84 0.00 0.00 7.65 0.00 14.27 17.48 76.32 12.42 17.26 13.53 2.76 19.04 11 ER1c ExonRegion 0 17.91 10.35 1.07 2.79 2.07 26.59 8.36 0.00 0.00 1.45 0.07 1.30 0.00 1.85 0.00 1.04 0.00 1.62 3.86 0.00 1.63 0.60 3.56 12 E1_Db KnownBoundary 0 18.89 3.29 3.55 0.00 4.33 18.51 0.00 0.00 1.10 2.71 0.00 0.00 6.82 4.77 0.00 4.36 8.13 2.07 4.80 5.18 3.15 0.00 3.24 13 E1b_E1c KnownJunction 0 0.00 0.00 3.34 4.03 0.00 0.00 0.00 0.00 0.00 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1_Ac KnownBoundary 0 6.82 3.03 11.56 3.93 0.00 11.30 0.00 3.57 4.83 12.73 6.79 0.00 0.00 0.00 0.00 4.19 7.95 7.42 0.00 3.26 5.62 0.00 0.00 15 ER1d ExonRegion 0 19.05 4.07 3.88 1.36 0.00 20.17 4.19 0.00 0.00 2.29 1.93 4.33 0.00 8.12 2.90 2.97 0.00 1.85 3.19 0.00 2.20 2.08 3.43 16 ER1e ExonRegion 0 9.82 4.91 8.65 1.13 0.00 15.22 5.07 1.34 0.96 2.53 7.22 0.98 0.00 16.09 21.84 2.13 1.25 7.98 4.09 9.63 3.99 4.32 4.88 17 E1_Dc KnownBoundary 0 3.26 0.00 9.70 1.27 0.00 0.00 2.12 8.54 2.55 10.53 5.11 0.00 0.00 9.59 0.00 0.00 0.00 16.66 0.00 6.39 2.53 2.57 0.00 18 E1c_E1d KnownJunction 0 3.19 6.12 42.16 38.26 0.00 8.46 4.28 20.29 14.55 18.08 12.63 0.00 0.00 2.88 0.00 4.27 4.68 95.92 4.33 21.60 8.90 0.00 4.27 19 E1_Ad KnownBoundary 0 0.00 5.53 7.81 12.79 0.00 2.27 0.00 4.03 7.73 5.35 7.79 0.00 0.00 7.77 0.00 3.67 0.00 33.45 4.05 3.00 8.53 0.00 12.04 20 ER1f ExonRegion 0 4.23 8.13 12.87 1.36 0.00 17.42 5.30 1.73 3.71 4.59 10.63 0.00 0.00 35.73 20.31 2.97 3.30 14.78 0.00 17.02 8.81 4.17 10.28 21 ER1g ExonRegion 0 15.90 33.64 24.80 12.26 15.26 65.43 22.61 11.16 12.06 15.78 36.77 0.19 0.00 42.36 27.98 16.65 19.26 30.14 18.58 19.16 30.23 13.57 20.68 22 E1_Dd NovelBoundary 0 0.00 12.04 5.71 0.00 11.80 179.10 27.65 2.34 3.07 5.37 6.84 0.00 0.00 16.42 0.00 7.78 0.00 17.41 14.12 8.82 7.85 3.06 0.00 23 E1d_E2b KnownJunction 1 32.15 91.56 60.20 50.04 65.37 221.52 101.09 47.07 44.62 47.52 61.38 0.00 0.00 94.71 56.99 38.96 42.82 101.35 42.82 36.88 61.78 18.31 52.41 24 I1 Intron 0 9.88 2.46 11.36 20.36 3.70 9.19 2.52 16.02 15.27 16.55 16.04 3.96 2.00 21.31 12.86 13.36 13.70 13.97 22.03 16.18 21.32 5.40 15.74 25 I1_AR1 ActiveIntronRegion 0 9.95 2.48 11.44 20.50 3.73 9.26 2.53 16.13 15.37 16.66 16.15 3.99 2.02 21.45 12.95 13.45 13.79 14.06 22.18 16.30 21.47 5.44 15.85 26 E2_Aa NovelBoundary 0 66.38 24.73 9.96 23.07 10.70 33.79 10.51 20.66 19.07 25.14 23.85 0.00 6.82 36.91 19.66 11.71 33.85 31.71 31.15 28.32 23.54 7.53 20.83 27 ER2a ExonRegion 1 259.16 362.02 132.28 59.01 191.04 403.91 476.26 86.56 28.31 124.18 475.13 15.77 2.69 718.46 440.13 672.08 412.19 562.74 322.57 287.23 27.43 45.22 58.24 28 E2_Ab KnownBoundary 1 464.30 731.38 265.10 146.20 295.25 693.63 746.00 183.89 57.70 241.84 571.09 63.77 18.51 392.20 232.03 797.23 554.65 1055.61 532.91 468.45 40.09 37.90 71.79 29 ER2b ExonRegion 1 255.44 381.99 286.94 163.20 145.91 339.27 215.60 245.47 136.58 347.79 806.09 34.23 16.75 684.65 451.54 301.30 548.71 541.30 260.23 426.39 173.29 94.17 113.61 30 E2a_E3a KnownJunction 1 314.72 540.30 592.71 385.93 132.68 233.45 131.52 482.58 259.89 609.04 1274.01 42.01 41.88 1555.31 1056.06 837.05 842.07 959.07 710.51 958.12 246.86 184.25 117.03 31 ER3a ExonRegion 1 562.44 1225.50 617.33 510.27 447.32 517.67 501.74 569.90 302.93 724.74 1251.49 172.80 66.02 1488.08 1162.99 1148.69 774.17 1148.98 767.26 1107.63 236.44 282.86 265.10 32 E3a_E4a KnownJunction 0 342.43 979.63 651.54 553.61 553.57 895.11 912.98 634.35 309.17 716.41 966.03 254.18 91.39 874.39 764.57 494.57 767.93 1141.42 276.71 1006.57 207.20 214.19 211.96 33 ER4a ExonRegion 0 259.48 851.26 610.59 549.36 849.22 1215.89 1067.26 632.08 325.66 737.26 1331.04 399.37 163.94 1102.81 922.02 438.69 805.42 805.99 374.17 881.98 214.69 201.08 174.44 34 E4a_E5a KnownJunction 0 372.14 1077.31 623.75 600.92 1675.81 1911.63 1871.75 698.96 340.48 797.34 1986.08 498.46 222.39 1462.72 1173.38 557.46 987.00 602.82 521.80 1188.67 234.07 229.63 177.73 35 I4 Intron 0 23.49 46.87 10.30 36.09 35.07 29.23 37.42 18.17 16.02 28.01 37.93 45.44 33.59 38.82 12.58 21.47 23.20 19.78 11.03 35.31 5.73 12.37 6.39 36 I4_SR1 SilentIntronRegion 1 8.37 30.40 4.86 24.19 23.21 20.30 27.51 16.87 15.02 26.45 41.93 56.49 43.02 45.49 8.44 23.24 26.76 29.02 12.45 42.17 7.49 13.80 6.70 37 I4_AR1 ActiveIntronRegion 0 1.81 30.99 2.63 48.29 37.21 32.48 45.33 18.93 18.00 34.84 39.95 48.04 56.50 33.87 6.36 39.06 48.41 22.88 6.83 27.76 2.20 3.27 7.55 38 I4_AR2 ActiveIntronRegion 0 12.28 30.93 4.06 31.14 32.79 26.94 37.53 13.62 11.64 21.25 33.69 42.90 47.48 36.29 7.51 21.93 19.74 12.57 11.74 24.27 4.51 7.70 7.56 39 I4_SR2 SilentIntronRegion 0 14.57 22.76 5.50 20.10 17.85 19.34 25.07 7.21 7.13 12.50 14.14 22.03 24.22 27.05 11.31 10.23 6.39 4.16 3.43 13.28 0.95 7.17 1.26 40 I4_SR3 SilentIntronRegion 0 36.60 59.45 11.06 37.88 42.19 23.71 46.39 10.93 11.90 22.52 40.94 21.95 21.95 29.01 10.17 17.76 29.15 12.68 4.93 27.31 2.73 12.84 8.42 41 I4_AR5 ActiveIntronRegion 0 50.62 68.42 26.36 67.58 68.68 55.76 59.21 32.02 25.48 41.73 41.33 40.11 20.45 34.36 22.47 23.86 24.48 14.85 15.18 41.78 7.43 15.33 7.74 42 I4_SR4 SilentIntronRegion 0 70.08 93.17 14.83 60.97 53.17 51.23 57.48 28.73 20.02 37.74 33.67 38.75 17.09 29.63 26.59 23.46 18.97 13.60 8.90 28.46 4.85 11.13 5.79 43 E5_Aa NovelBoundary 0 123.21 109.06 29.12 100.09 114.43 46.39 80.38 59.23 23.23 36.16 28.80 42.76 26.62 28.67 14.83 11.71 4.77 3.69 18.45 22.50 0.00 18.98 0.00 44 ER5a ExonRegion 0 616.19 1441.81 917.21 932.72 1098.48 1265.98 1289.03 1017.67 441.74 1106.23 2286.85 805.97 244.44 1716.67 1417.44 907.61 1166.89 808.85 708.64 1395.54 236.30 413.62 214.45 45 E5a_E6a KnownJunction 0 1141.17 2397.53 1375.03 1353.34 1017.32 1091.53 1145.89 1401.53 583.88 1479.23 2494.53 1225.45 261.83 2372.55 2173.81 1566.43 1351.00 1011.17 1235.61 1855.07 222.71 697.57 315.76 46 E6_Aa NovelBoundary 0 363.77 807.22 584.81 530.27 239.13 240.43 341.73 546.53 232.46 637.94 789.73 374.97 64.93 536.41 422.15 458.17 483.40 365.37 346.93 671.07 86.30 300.60 123.78 47 ER6a ExonRegion 0 718.21 1566.94 1074.65 1083.24 771.29 707.17 766.18 1282.93 523.06 1369.60 2819.69 1141.15 322.22 1844.59 1547.59 1008.09 1418.59 782.38 813.39 1433.53 198.12 562.52 281.34 48 E6a_E7a KnownJunction 0 823.92 1347.46 1038.73 1044.19 995.50 716.01 785.17 1308.62 481.79 1344.52 2065.68 1104.36 233.10 1559.72 1558.07 704.69 1108.55 538.06 692.82 1204.14 126.15 420.12 239.02 49 ER7a ExonRegion 0 701.90 1440.99 1034.77 1023.79 884.36 753.14 751.10 1259.59 464.01 1284.45 2078.41 1081.99 287.33 1493.31 1334.02 831.73 1136.15 499.99 560.23 1127.28 140.07 442.11 183.00 50 E7_Da KnownBoundary 0 963.36 2205.27 1232.63 1272.57 1283.53 1075.86 1252.01 1452.42 526.59 1394.16 2229.35 1246.76 486.01 1354.65 1516.29 991.62 1225.99 452.42 739.79 1325.96 134.98 669.40 190.45 51 ER7b ExonRegion 0 156.68 476.21 276.23 253.17 295.79 234.72 291.90 354.49 125.60 343.07 387.81 377.94 119.78 251.29 295.59 130.28 180.71 89.74 123.60 290.05 19.00 142.83 27.97