Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM87A Gene 0 109.29 151.17 70.51 130.06 95.72 137.05 73.38 81.15 87.62 81.67 112.69 143.71 108.49 112.47 95.46 91.03 83.14 65.61 39.19 66.79 71.89 163.07 117.29 2 307216 Transcript 0 7.57 8.47 3.59 15.86 15.43 8.68 29.76 10.04 5.67 12.98 3.85 11.81 13.90 10.81 19.51 9.67 5.73 7.98 4.93 10.79 2.51 6.76 6.83 3 389834 Transcript 0 258.58 301.38 142.06 229.90 154.18 154.22 91.41 149.41 131.67 137.43 135.29 187.16 137.50 128.39 188.39 107.92 87.18 70.95 44.98 76.93 77.80 266.63 121.35 4 448392 Transcript 0 0.00 3.35 1.39 2.06 0.00 0.00 0.00 0.00 4.72 4.30 0.00 6.30 0.00 0.00 0.00 0.00 15.80 2.07 0.00 6.20 8.65 2.45 0.00 5 IG4 Intergenic 0 3.30 3.81 5.89 2.96 4.18 15.46 7.17 3.75 5.94 6.94 11.07 5.31 6.03 10.53 5.29 11.45 9.28 21.22 12.60 17.72 16.74 11.71 12.53 6 IG4_AR1 ActiveIntergenicRegion 0 3.32 3.83 5.91 2.97 4.19 15.52 7.20 3.77 5.96 6.96 11.11 5.33 6.05 10.57 5.32 11.49 9.31 21.31 12.65 17.79 16.81 11.76 12.58 7 ER1a ExonRegion 0 4.99 1.12 1.90 4.08 5.49 11.92 2.11 1.39 2.15 3.41 6.04 3.08 2.42 13.19 4.52 17.81 5.99 14.33 12.53 7.72 18.54 8.33 24.29 8 E1_Ab KnownBoundary 0 7.04 11.45 2.60 10.62 26.91 34.13 11.17 7.31 7.61 8.25 38.43 0.00 12.99 43.68 14.22 75.28 20.38 48.91 28.52 16.55 27.18 25.11 61.12 9 ER1b ExonRegion 0 20.79 60.89 34.07 32.75 27.81 53.57 35.51 22.10 41.23 32.52 81.36 23.66 28.17 56.00 30.25 57.74 95.69 43.22 18.08 48.95 118.73 62.89 71.24 10 E1_Da NovelBoundary 0 27.56 5.79 10.88 17.58 7.89 34.01 13.65 0.00 6.60 7.20 22.22 0.00 0.00 25.96 18.54 88.18 43.67 26.49 34.26 48.64 44.29 19.47 97.57 11 E1a_E2a KnownJunction 1 0.00 21.77 67.98 69.52 4.24 21.52 8.26 43.29 79.66 67.05 280.33 37.96 46.75 130.91 44.63 101.68 208.98 87.63 37.74 115.88 269.04 97.42 124.29 12 E1a_E3a KnownJunction 0 0.00 3.35 1.39 2.06 0.00 0.00 0.00 0.00 4.72 4.30 0.00 6.30 0.00 0.00 0.00 0.00 15.80 2.07 0.00 6.20 8.65 2.45 0.00 13 ER2a ExonRegion 1 27.34 125.85 61.45 102.06 50.71 64.63 21.66 70.07 84.23 75.88 168.23 85.95 60.89 188.40 99.17 281.23 111.96 175.26 90.18 137.70 103.79 244.69 313.59 14 E2a_E3a KnownJunction 1 59.34 206.34 62.48 139.98 88.12 91.82 37.10 92.01 103.82 79.83 72.81 92.28 72.88 91.88 75.53 237.63 42.82 227.04 49.22 110.83 23.78 185.29 342.73 15 ER3a ExonRegion 0 31.11 263.35 49.66 95.50 182.32 304.41 118.05 77.14 73.69 71.63 84.94 123.49 108.14 80.90 41.83 107.48 68.28 97.74 41.04 61.41 28.21 119.73 115.18 16 E3a_E4a KnownJunction 0 26.97 483.33 58.87 82.31 152.72 337.53 253.01 70.73 60.65 78.09 131.24 146.90 163.95 90.12 44.38 46.91 86.58 11.36 27.29 50.75 31.07 102.14 50.71 17 ER4a ExonRegion 0 70.59 365.53 68.89 158.00 83.93 153.56 113.99 110.01 110.99 101.15 118.96 268.46 158.89 112.25 79.33 72.19 99.26 37.80 39.23 77.55 35.63 231.69 106.98 18 E4a_E5a KnownJunction 1 108.02 189.11 74.86 158.89 96.18 149.29 110.45 89.99 118.37 127.89 185.57 355.92 118.66 143.15 88.26 126.55 140.44 44.44 40.38 111.41 58.26 238.57 118.57 19 ER5a ExonRegion 0 62.52 207.27 59.39 170.41 111.29 111.52 113.79 95.00 132.98 120.53 147.01 281.17 172.14 146.95 63.94 104.13 134.73 35.38 28.55 103.19 51.26 233.24 118.77 20 E5a_E6a KnownJunction 0 80.38 276.92 64.25 170.21 111.21 145.31 152.05 82.64 109.84 81.50 158.25 260.94 290.40 144.33 86.66 91.09 112.95 49.29 46.40 118.63 46.15 271.82 154.34 21 ER6a ExonRegion 0 52.96 251.71 47.24 151.61 105.90 174.54 120.42 85.50 112.97 95.50 177.78 246.11 230.33 114.45 102.96 101.78 132.62 65.08 49.76 93.38 52.35 253.26 137.63 22 E6_Da NovelBoundary 0 14.67 14.67 1.27 17.55 33.70 2.90 25.04 13.14 5.93 6.66 0.00 18.16 20.45 2.47 0.00 4.36 0.00 2.16 4.42 24.99 9.14 0.00 27.32 23 E6a_E7a KnownJunction 0 5.63 3.22 1.83 10.82 16.21 9.65 38.02 8.71 3.33 12.49 2.32 6.30 6.82 8.12 23.36 7.35 4.58 4.64 4.52 8.50 0.00 2.45 0.00 24 E6a_E8a KnownJunction 0 49.64 338.62 31.70 114.67 95.84 148.44 152.49 76.52 97.39 70.30 186.94 275.49 259.56 79.46 56.99 82.88 166.62 63.17 59.48 79.39 59.92 232.26 142.30 25 ER7a ExonRegion 0 9.50 13.73 5.35 20.89 14.64 7.71 21.50 11.37 8.02 13.47 5.39 17.31 20.99 13.49 15.66 11.98 6.87 11.32 5.35 13.08 5.02 11.07 13.66 26 E7_Da NovelBoundary 1 28.30 12.43 6.50 28.47 7.05 10.85 18.81 13.68 6.80 9.05 4.00 6.30 61.20 7.65 4.45 4.36 0.00 0.00 0.00 8.44 0.00 2.39 19.46 27 E8_Aa NovelBoundary 0 10.45 23.88 0.00 43.38 4.33 0.00 3.80 11.05 7.93 20.17 0.00 0.00 0.00 2.41 4.45 4.02 13.37 7.21 3.67 8.95 0.00 4.84 18.95 28 ER8a ExonRegion 0 54.49 284.75 33.77 107.40 84.85 142.40 85.88 80.77 101.70 82.31 186.44 296.57 163.36 146.42 60.75 90.07 137.16 55.79 49.94 74.25 53.39 182.54 137.85 29 E8a_E9a KnownJunction 0 68.46 197.53 45.62 94.06 74.70 85.69 70.26 78.37 89.70 100.68 187.84 314.50 145.28 207.72 123.99 135.18 181.21 73.70 42.92 69.61 92.42 224.24 217.59 30 I8_AR1 ActiveIntronRegion 0 8.94 12.07 10.50 31.20 12.99 4.37 10.18 7.53 5.23 11.32 2.42 3.74 11.73 3.06 6.18 7.18 5.50 8.54 9.11 12.56 4.77 5.30 6.78 31 ER9a ExonRegion 0 45.54 157.96 32.89 80.67 80.70 98.91 64.38 69.05 92.93 88.81 175.89 230.16 135.86 165.74 82.97 132.60 144.60 70.99 47.93 75.26 74.00 211.01 181.50 32 E9a_E10a KnownJunction 1 45.93 120.57 32.55 86.74 116.47 162.80 63.42 68.02 110.99 81.23 134.09 225.22 212.00 153.75 42.28 118.77 77.89 65.16 56.57 58.29 80.87 176.72 135.22 33 ER10a ExonRegion 0 48.02 99.66 54.54 116.87 94.12 162.17 86.32 83.27 112.52 105.21 178.03 220.31 137.82 182.93 92.05 141.82 165.44 119.55 55.10 80.26 129.11 201.08 204.46 34 E10a_E11a KnownJunction 0 75.42 105.77 71.29 136.85 115.62 221.24 82.54 84.37 139.78 112.63 190.94 198.36 92.69 198.36 115.21 192.17 162.23 150.77 59.95 75.81 165.93 209.11 188.99 35 ER11a ExonRegion 0 47.03 118.90 55.19 129.23 76.34 156.77 75.37 76.35 112.64 104.88 166.65 117.67 92.02 168.60 100.12 156.87 148.41 147.78 56.67 92.30 145.47 177.37 189.27 36 E11a_E12a KnownJunction 0 89.94 108.07 55.00 116.24 98.39 174.39 76.00 59.11 101.76 93.94 158.72 102.63 52.92 124.96 72.56 141.67 87.05 123.57 72.76 69.09 139.74 177.82 168.17 37 ER12a ExonRegion 0 57.39 90.88 63.13 124.23 61.03 180.24 73.48 63.05 98.65 92.83 173.10 104.64 83.92 189.80 93.89 132.70 155.04 133.49 57.27 81.73 178.83 178.19 216.16 38 E12a_E13a KnownJunction 0 55.27 124.65 61.68 162.95 75.55 208.18 88.72 75.21 107.61 108.52 157.09 69.32 113.79 166.17 124.24 148.17 136.70 163.24 98.92 66.99 172.36 159.45 167.91 39 I12_AR1 ActiveIntronRegion 0 11.87 3.21 9.28 14.40 10.34 9.64 8.94 7.79 7.13 5.45 6.04 4.37 9.12 8.04 4.94 9.92 12.38 5.06 4.48 13.05 6.96 33.15 25.61 40 ER13a ExonRegion 0 70.40 95.55 64.43 124.83 82.21 185.00 62.99 80.46 108.15 88.63 154.49 63.75 93.53 178.98 79.34 136.20 113.76 148.78 79.77 83.84 143.88 132.71 170.62 41 E13_Da NovelBoundary 0 3.78 6.71 11.32 15.75 0.00 7.61 3.89 7.76 4.08 3.92 6.58 25.21 27.27 14.72 0.00 20.25 34.69 23.50 9.60 13.68 13.84 11.39 21.00 42 E13a_E14a KnownJunction 1 60.75 114.39 89.56 121.50 96.10 204.71 75.87 87.53 114.29 91.60 132.61 50.57 59.74 183.59 73.43 134.32 97.05 101.64 58.83 94.73 145.42 124.43 163.90 43 ER14a ExonRegion 0 102.47 104.65 93.26 150.48 140.42 293.64 110.28 89.17 129.51 99.23 199.46 128.53 129.56 215.47 117.78 153.98 124.10 104.71 82.53 109.33 163.46 228.94 222.03 44 E14a_E15a KnownJunction 0 87.13 92.29 85.07 115.27 100.00 150.54 93.40 79.23 132.52 101.30 111.98 77.43 61.85 111.54 71.82 72.29 90.98 57.79 42.35 77.98 139.43 179.17 135.56 45 E15_Aa NovelBoundary 0 31.93 5.72 0.00 6.79 8.66 2.21 31.49 0.00 1.48 2.18 16.11 6.30 12.66 7.36 8.90 4.36 4.30 7.54 13.27 14.76 17.30 21.49 19.80 46 ER15a ExonRegion 0 74.69 102.68 65.55 121.67 83.08 141.14 89.98 53.58 106.43 90.96 127.80 96.94 82.67 197.34 91.71 125.69 65.12 76.26 57.77 80.67 133.90 155.42 149.57 47 E15a_E16a KnownJunction 1 91.28 96.04 77.88 186.12 68.85 156.61 67.97 65.18 114.81 94.47 100.60 46.52 67.04 190.89 66.88 124.75 64.33 116.11 68.71 80.86 120.59 115.36 147.59 48 I15_AR1 ActiveIntronRegion 0 1.72 8.56 1.61 6.80 6.76 10.64 18.28 3.95 4.38 3.79 4.15 12.03 3.01 7.15 6.50 6.35 3.23 3.23 10.66 8.38 4.73 15.20 4.85 49 ER16a ExonRegion 0 74.83 87.42 82.64 126.49 80.86 179.48 65.32 77.13 120.08 91.22 153.57 123.60 92.81 203.72 119.17 158.52 117.82 91.30 58.13 89.18 167.84 170.43 173.43 50 E16_Da NovelBoundary 0 16.60 9.27 9.40 10.99 54.50 5.00 15.28 6.82 5.93 10.13 7.16 13.95 27.11 21.60 8.90 48.02 8.79 40.58 14.02 24.10 21.44 25.60 56.51 51 E16a_E17a KnownJunction 1 82.46 92.29 99.38 105.58 107.64 184.50 56.88 78.41 94.67 69.12 154.72 123.19 190.73 199.90 76.15 119.20 94.34 98.16 43.11 106.29 115.46 191.17 176.62 52 I16_AR1 ActiveIntronRegion 0 4.15 3.99 0.00 0.00 8.75 1.20 8.66 0.00 0.00 2.22 2.53 12.16 15.15 18.55 11.27 7.77 19.42 1.21 10.41 9.74 10.09 13.62 11.45 53 I16_AR3 ActiveIntronRegion 0 10.06 8.75 3.54 26.30 12.03 8.02 15.11 12.80 10.21 11.72 8.98 21.75 28.85 13.22 3.69 11.74 7.16 6.40 5.98 15.50 2.39 35.56 8.41 54 ER17a ExonRegion 0 148.56 134.05 123.51 185.46 145.25 254.06 100.85 102.94 134.13 113.02 180.78 138.19 148.43 195.46 124.52 130.33 142.21 123.08 55.18 110.06 114.50 204.07 189.85 55 E17a_E18a KnownJunction 0 270.79 199.70 164.13 312.25 266.30 355.25 161.19 154.07 189.49 134.55 296.39 178.86 191.87 223.38 168.86 200.89 216.64 154.08 71.34 123.49 128.44 310.64 252.59 56 ER18a ExonRegion 0 184.92 199.82 138.96 252.93 165.81 365.37 144.33 126.71 168.61 106.44 228.14 215.64 154.47 195.00 154.33 182.26 161.80 143.89 56.36 124.85 119.68 275.43 228.21 57 E18a_E19a KnownJunction 0 199.89 203.78 119.16 237.30 196.94 310.84 155.06 95.05 159.78 102.96 200.68 200.02 149.02 190.24 213.61 195.76 126.88 122.37 58.73 112.88 84.57 307.94 241.49 58 ER19a ExonRegion 0 171.21 203.21 109.56 238.58 145.78 255.29 120.13 112.94 144.16 104.47 196.05 235.88 167.08 200.93 170.91 158.11 143.29 113.41 72.30 126.37 69.85 260.59 241.54 59 E19a_E20a KnownJunction 0 148.25 201.15 76.64 203.94 128.10 256.05 115.04 99.07 103.85 79.27 198.73 342.86 177.42 192.83 179.62 106.04 114.73 81.04 70.97 140.62 62.02 198.58 203.93 60 E20a_E21a KnownJunction 0 221.74 136.82 128.97 203.90 215.03 286.94 118.67 112.91 139.76 85.69 174.99 194.61 137.00 181.47 172.94 131.50 152.88 61.56 48.10 151.29 94.21 233.67 175.51 61 ER20a ExonRegion 0 150.68 150.35 112.62 237.14 151.05 264.42 109.21 127.91 156.98 104.59 202.33 272.34 157.65 177.81 138.42 121.28 165.58 85.65 65.56 157.10 92.20 222.33 195.43 62 ER21a ExonRegion 0 262.48 253.70 137.79 248.55 198.29 265.42 127.40 155.27 147.73 138.05 176.53 297.60 228.66 164.50 173.70 126.05 107.26 82.46 59.76 104.71 90.69 293.26 169.70 63 E21_Da KnownBoundary 1 314.80 392.10 84.44 119.83 95.59 183.53 123.52 79.40 89.96 86.66 38.69 115.54 48.86 49.39 76.02 40.84 32.45 16.75 14.12 37.52 2.41 239.73 35.17 64 ER21b ExonRegion 0 258.58 301.38 142.06 229.90 154.18 154.22 91.41 149.41 131.67 137.43 135.29 187.16 137.50 128.39 188.39 107.92 87.18 70.95 44.98 76.93 77.80 266.63 121.35