Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GNB5 Gene 0 49.92 102.04 66.63 110.07 61.25 107.30 57.47 89.36 131.02 77.89 67.77 31.01 45.39 68.86 53.16 32.83 37.73 65.60 60.39 81.43 79.64 93.15 77.31 2 261837 Transcript 0 1.41 0.42 0.41 0.51 0.45 0.99 0.00 0.36 0.98 0.00 0.00 0.95 0.00 1.08 0.97 0.00 0.00 0.00 0.00 0.18 0.55 0.00 0.24 3 358784 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 396335 Transcript 1 18.59 13.23 13.01 5.09 17.35 62.56 18.20 16.15 29.57 22.07 26.62 0.00 0.00 19.75 23.04 20.16 26.52 46.30 47.78 38.86 41.72 27.42 73.69 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2b ExonRegion 0 0.00 0.00 0.00 0.00 3.28 0.75 0.00 0.00 0.75 1.39 0.00 1.45 0.00 0.00 0.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.20 9 E2a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 18.59 13.23 13.01 5.09 17.35 62.56 18.20 16.15 29.57 22.07 26.62 0.00 0.00 19.75 23.04 20.16 26.52 46.30 47.78 38.86 41.72 27.42 73.69 11 E3_Ab KnownBoundary 1 75.87 37.10 16.65 13.92 27.76 141.91 57.72 27.36 34.20 39.33 66.86 0.00 0.00 66.81 18.54 55.97 36.56 97.25 32.57 65.96 93.78 38.21 90.91 12 ER3b ExonRegion 1 13.50 20.34 18.62 14.75 10.24 40.38 20.31 31.58 43.85 33.89 47.96 1.64 2.92 24.76 14.64 17.62 28.07 69.62 20.92 42.78 71.47 15.77 42.30 13 E3a_E4a KnownJunction 1 10.00 5.13 48.28 27.87 4.33 25.16 0.00 43.62 85.13 72.50 41.22 0.00 6.49 36.20 26.70 0.00 51.61 59.28 41.32 89.10 78.33 37.84 61.55 14 ER4a ExonRegion 1 6.30 25.65 49.18 70.90 18.55 35.30 16.54 69.71 146.37 93.23 93.77 13.37 31.26 81.88 73.89 66.02 65.44 157.09 132.02 110.53 136.23 80.03 154.38 15 E4a_E5a KnownJunction 1 15.85 39.73 49.17 110.54 32.26 80.81 28.97 73.44 151.76 117.66 117.87 6.00 55.35 104.07 58.97 62.63 61.24 146.12 110.87 80.54 151.91 120.69 116.44 16 ER5a ExonRegion 1 7.61 42.66 71.48 125.19 39.56 113.43 36.31 74.04 179.50 118.92 131.67 21.13 48.80 87.43 61.89 49.82 63.11 137.31 87.52 73.10 154.10 101.25 118.37 17 E5a_E6a KnownJunction 0 12.30 56.24 78.62 136.21 56.20 178.99 50.79 50.60 173.29 91.73 127.24 32.86 61.68 72.58 76.02 58.36 85.09 89.37 87.44 68.26 144.68 98.89 118.74 18 I5_SR1 SilentIntronRegion 0 11.12 11.18 5.29 11.93 7.47 5.62 7.27 8.05 6.97 6.57 0.29 1.16 1.70 1.38 1.52 1.50 1.27 8.05 5.84 5.65 2.64 0.90 4.65 19 E6_Aa NovelBoundary 0 25.86 5.99 11.27 22.21 3.82 5.39 0.00 4.27 11.89 12.36 0.00 0.00 0.00 4.59 0.00 4.02 0.00 9.49 16.75 5.69 2.97 6.00 3.67 20 ER6a ExonRegion 0 15.39 40.09 80.16 112.15 37.84 125.25 61.16 79.24 212.84 108.06 128.48 25.19 42.76 81.63 66.20 47.40 72.66 106.79 108.84 139.79 166.94 91.40 104.73 21 E6a_E7a KnownJunction 0 36.15 70.25 80.66 143.74 4.33 158.77 60.86 136.94 246.70 138.45 144.30 36.61 74.51 113.66 72.93 64.17 71.44 127.59 215.16 172.13 198.80 152.47 118.91 22 I6_AR1 ActiveIntronRegion 0 39.13 20.74 9.31 16.18 17.06 6.43 8.86 9.03 9.38 9.26 1.85 1.14 5.19 0.43 4.41 7.58 1.05 10.54 10.15 12.21 3.50 1.99 2.81 23 E7_Aa NovelBoundary 0 18.82 15.79 18.86 34.66 8.66 25.04 10.07 18.20 10.82 11.36 0.00 6.90 0.00 0.00 4.45 4.36 4.77 6.34 17.32 2.94 3.15 0.00 8.71 24 ER7a ExonRegion 0 43.06 60.69 86.14 159.08 51.02 105.02 43.77 94.06 208.39 131.55 123.68 33.27 51.24 122.81 85.66 73.99 64.73 143.36 139.13 126.67 155.93 132.77 139.50 25 E7_Da NovelBoundary 0 23.26 19.73 9.99 13.72 21.31 13.40 4.15 4.35 11.98 7.12 5.11 6.30 6.82 2.47 13.72 0.00 9.07 6.92 13.46 2.94 20.82 0.00 4.27 26 E7a_E8a KnownJunction 0 26.97 48.74 77.85 123.26 20.20 96.08 34.84 74.88 143.72 95.01 77.12 12.45 34.74 98.65 57.98 48.19 17.86 148.73 74.92 125.47 97.98 61.97 115.33 27 I7_AR1 ActiveIntronRegion 0 10.58 14.46 1.23 11.66 15.76 14.06 2.65 9.99 24.70 3.57 5.80 5.29 4.69 2.53 2.90 0.99 6.60 9.85 15.93 11.35 4.41 0.00 5.87 28 I7_SR2 SilentIntronRegion 0 5.15 6.68 1.95 10.67 3.09 8.40 5.94 8.61 10.16 5.80 3.79 4.95 8.72 5.41 5.66 4.16 1.03 14.52 8.45 10.49 11.41 2.67 6.77 29 I7_AR9 ActiveIntronRegion 0 6.71 10.35 3.31 10.47 5.10 6.21 5.33 11.54 11.07 8.11 2.90 0.65 5.99 5.21 4.35 4.76 3.59 14.18 5.95 9.53 8.09 4.02 9.83 30 E8_Aa NovelBoundary 0 14.67 14.67 1.42 14.52 4.33 0.00 2.25 6.90 19.42 8.70 6.63 6.30 6.82 4.47 8.90 4.19 4.77 25.41 7.34 22.18 2.66 5.88 0.00 31 ER8a ExonRegion 1 20.92 60.08 66.31 83.95 34.30 69.21 36.45 79.21 147.18 90.37 80.50 13.17 38.99 94.48 61.39 36.24 44.77 126.84 70.79 118.65 146.47 77.48 98.74 32 E8a_E9a KnownJunction 1 30.45 100.05 67.53 115.50 55.43 95.74 60.46 89.95 143.66 103.12 112.34 6.30 32.63 126.14 59.34 59.98 24.87 174.02 91.20 119.53 164.82 99.44 133.08 33 ER9a ExonRegion 1 39.66 118.83 86.35 104.13 54.59 161.45 60.41 84.21 148.09 94.02 98.94 11.72 36.04 112.66 73.89 60.57 54.79 186.66 87.11 135.98 168.25 90.47 118.42 34 E9_Da NovelBoundary 0 14.22 29.14 2.81 20.08 11.46 2.67 15.68 14.13 4.46 2.63 4.95 0.00 8.28 4.59 24.72 0.00 0.00 22.43 20.99 7.93 5.31 6.12 3.76 35 E9a_E10a KnownJunction 0 38.45 105.51 79.15 112.97 82.17 201.65 75.16 70.57 131.89 86.36 78.91 12.15 20.45 101.42 86.41 42.81 74.05 147.53 76.99 112.11 148.76 138.39 144.78 36 I9_SR2 SilentIntronRegion 0 13.90 5.50 2.12 7.85 20.68 11.34 7.16 7.95 12.09 1.98 2.24 1.38 1.49 3.65 7.25 8.04 3.83 6.03 7.38 8.22 1.70 0.81 9.08 37 ER10a ExonRegion 1 39.05 115.83 81.82 107.20 66.62 168.15 77.36 89.74 145.82 89.72 99.05 19.44 19.72 113.19 77.45 65.20 55.37 159.77 83.21 111.20 137.98 104.73 139.70 38 E10a_E11a KnownJunction 1 59.57 121.29 83.76 110.97 71.90 184.16 99.85 96.44 145.89 99.77 124.35 12.60 0.00 101.60 96.17 47.08 47.31 144.92 98.26 140.11 132.57 82.97 127.11 39 ER11a ExonRegion 1 55.81 131.62 93.82 145.07 87.14 199.09 100.89 104.94 165.26 105.62 112.55 15.58 52.12 133.75 70.56 61.28 70.85 146.77 155.98 146.85 175.50 121.12 136.57 40 E11a_E12a KnownJunction 0 51.05 114.91 112.36 176.73 65.37 130.04 63.06 106.14 184.78 114.14 88.86 26.56 25.81 139.15 97.78 61.95 69.75 130.83 113.60 158.13 147.77 140.04 108.92 41 I11_AR1 ActiveIntronRegion 0 6.03 10.21 4.95 5.52 11.24 8.46 5.57 5.24 8.74 5.56 1.84 0.41 0.52 5.93 2.43 2.02 4.93 15.19 5.62 8.36 6.87 5.93 8.76 42 ER12a ExonRegion 0 59.97 132.28 106.29 162.22 83.73 174.13 81.75 111.50 180.62 121.79 111.51 32.90 71.02 130.80 84.36 56.13 81.77 116.22 121.33 131.75 145.41 131.92 135.98 43 E12_Da NovelBoundary 0 3.78 15.72 1.30 8.39 3.90 5.79 8.21 16.31 5.70 7.20 2.05 18.31 6.82 9.54 0.00 0.00 11.78 11.61 0.00 9.08 0.00 3.06 16.48 44 E12a_E13a KnownJunction 0 80.38 179.57 84.98 133.25 122.92 234.86 147.95 121.29 182.61 143.79 121.24 63.32 121.91 116.72 126.83 64.17 67.23 110.72 102.59 140.49 120.90 148.37 95.27 45 E13_Aa NovelBoundary 0 7.56 19.21 6.71 6.69 36.59 20.27 19.87 7.15 5.41 1.45 0.00 0.00 12.99 4.77 4.45 4.36 0.00 2.11 4.80 14.96 0.00 2.88 3.16 46 ER13a ExonRegion 0 66.92 132.50 72.03 127.38 77.03 117.30 68.57 105.99 135.01 76.72 58.52 42.29 54.60 61.00 51.84 25.31 29.24 35.36 42.90 72.41 53.22 104.99 61.69 47 ER13b ExonRegion 0 5.64 1.69 1.63 2.04 1.78 3.97 0.00 1.44 3.91 0.00 0.00 0.00 0.00 4.33 3.87 0.00 0.00 0.00 0.00 0.71 2.20 0.00 0.98 48 IG1 Intergenic 0 12.89 7.63 6.69 17.50 19.61 19.78 9.25 19.98 34.57 12.11 3.09 2.23 7.66 3.85 3.40 2.81 3.64 8.36 7.40 10.80 8.30 6.13 7.88 49 IG1_SR3 SilentIntergenicRegion 0 13.43 8.36 7.05 15.23 17.73 19.02 9.03 20.50 34.62 12.77 3.22 1.70 3.49 3.93 3.39 3.58 4.27 11.48 8.32 12.15 10.83 6.25 8.68 50 IG1_AR2 ActiveIntergenicRegion 0 10.89 4.55 4.57 18.34 23.94 24.58 9.48 8.82 32.74 9.50 2.63 1.08 9.69 3.88 4.21 2.70 2.50 5.09 4.34 6.76 9.25 3.29 7.11 51 IG1_SR2 SilentIntergenicRegion 0 20.48 13.03 10.83 35.96 43.62 34.92 16.85 45.95 63.58 23.60 4.02 4.23 23.64 5.07 5.16 1.43 2.91 5.65 14.49 17.01 5.28 11.82 13.62 52 IG1_AR1 ActiveIntergenicRegion 0 13.40 6.67 7.47 23.13 14.99 17.47 9.01 16.69 30.56 8.05 4.13 5.99 15.40 4.21 2.89 1.47 4.07 2.80 3.43 8.74 1.81 7.03 3.87