Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NEDD4 Gene 0 24.66 9.97 11.94 29.62 21.38 30.31 18.90 15.75 17.92 12.66 3.50 31.90 7.63 9.61 2.65 0.99 28.01 14.07 8.47 15.95 57.03 80.73 43.94 2 164316 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.50 0.09 0.00 0.27 0.08 0.00 0.00 0.00 0.11 0.00 0.20 0.71 0.90 0.00 0.00 0.22 0.54 0.00 3 435532 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 338963 Transcript 0 2.38 1.36 0.13 0.56 0.20 0.73 1.90 0.38 0.70 0.76 0.04 0.83 0.67 0.13 0.00 0.22 0.91 0.46 0.12 2.46 6.49 2.10 2.76 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.50 0.09 0.00 0.27 0.08 0.00 0.00 0.00 0.11 0.00 0.20 0.71 0.90 0.00 0.00 0.22 0.54 0.00 6 E1_Ab KnownBoundary 0 0.00 0.00 0.00 1.63 0.00 10.16 1.85 0.00 1.74 1.24 0.00 0.00 0.00 2.47 0.00 3.85 0.00 4.10 0.00 0.00 3.09 0.00 0.00 7 ER1b ExonRegion 0 9.51 1.63 0.98 5.16 8.79 17.60 13.30 1.04 8.13 5.12 2.02 2.03 1.56 8.78 0.00 0.85 27.22 22.03 11.91 11.30 51.33 27.76 64.70 8 E1a_E2a KnownJunction 0 6.74 0.00 5.94 8.59 25.72 24.42 10.02 0.00 13.34 9.03 2.53 6.30 0.00 4.89 0.00 0.00 48.25 17.99 18.17 6.33 62.40 27.92 101.07 9 ER2a ExonRegion 0 2.23 2.83 6.54 8.51 7.16 9.81 4.87 1.52 10.35 3.69 4.49 15.56 3.87 3.27 0.00 1.61 34.12 15.21 4.69 11.99 52.41 32.66 32.06 10 E2a_E3a KnownJunction 0 3.41 0.00 2.90 3.60 0.00 2.84 3.53 4.93 12.21 5.21 7.48 37.66 6.82 4.77 0.00 3.59 50.40 13.10 4.24 17.58 79.45 33.98 28.60 11 ER3a ExonRegion 0 0.51 2.24 6.05 5.88 1.15 3.76 5.73 4.75 23.61 6.75 5.28 29.05 3.80 12.27 1.32 0.41 81.06 35.86 12.78 20.15 83.71 79.67 68.99 12 E3a_E4a KnownJunction 0 0.00 3.03 11.86 11.22 8.06 12.38 4.15 2.55 17.01 8.49 4.53 30.16 0.00 17.01 0.00 0.00 71.15 32.08 8.85 28.76 64.25 111.63 116.52 13 ER4a ExonRegion 0 3.96 5.01 7.26 9.37 7.00 19.56 11.68 6.96 18.65 5.85 5.90 28.42 10.94 9.29 2.16 0.00 75.75 27.01 26.46 29.30 59.95 89.43 144.05 14 E4a_E5a KnownJunction 0 14.22 9.14 5.14 5.09 4.16 26.86 19.21 8.71 16.64 1.67 9.79 18.91 13.31 2.24 4.45 0.00 69.75 11.32 31.15 27.80 57.33 99.75 129.84 15 ER5a ExonRegion 0 6.70 3.65 4.74 7.12 17.59 18.30 20.72 8.00 16.31 3.87 3.36 34.40 23.36 10.17 0.38 0.00 61.13 8.25 6.72 22.14 56.81 76.05 48.51 16 E5a_E7a KnownJunction 0 3.11 3.35 6.56 5.53 24.11 20.27 16.69 5.05 12.99 4.03 2.63 30.01 11.69 4.59 0.00 0.00 37.96 0.00 3.76 16.30 41.45 68.70 10.93 17 ER6a ExonRegion 0 0.41 0.00 0.40 1.68 0.59 2.18 2.45 0.36 0.86 1.04 0.11 2.50 2.01 0.38 0.00 0.66 2.73 1.37 0.35 4.29 13.72 3.85 8.27 18 E6a_E7a NovelJunction 0 0.00 0.00 0.00 2.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.87 5.20 4.35 19 E6a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.75 0.00 0.00 20 ER7a ExonRegion 0 4.40 1.95 4.37 11.84 20.04 31.53 19.16 6.98 17.03 7.94 1.21 55.09 11.13 7.58 2.05 0.00 53.79 4.35 2.62 24.28 52.93 79.05 27.52 21 E7a_E8a KnownJunction 0 2.96 3.35 0.00 16.95 0.00 51.22 14.75 12.82 15.22 11.17 0.00 76.22 0.00 16.72 0.00 0.00 77.14 7.09 0.00 26.46 63.57 96.20 25.44 22 ER8a ExonRegion 0 4.37 3.94 0.79 16.07 8.29 26.83 13.43 12.29 17.15 10.10 3.90 65.85 13.16 12.36 5.33 0.00 40.04 9.15 0.00 30.75 68.92 90.10 59.35 23 E8a_E9a KnownJunction 0 3.33 2.50 1.69 19.31 15.96 13.57 20.27 7.35 20.51 13.62 2.58 62.72 0.00 14.83 10.38 0.00 33.66 14.22 0.00 41.16 88.77 113.71 81.27 24 ER9a ExonRegion 0 9.16 1.22 0.68 23.71 18.18 36.41 15.66 11.53 24.07 14.02 3.27 65.28 14.71 23.19 4.51 0.40 61.31 21.46 3.40 41.73 126.60 124.61 75.78 25 E9a_E10a KnownJunction 0 14.22 4.93 1.12 19.98 7.72 28.68 9.54 14.13 25.72 15.88 0.00 68.12 6.82 31.02 4.70 3.85 67.51 38.22 3.67 34.90 165.25 127.61 82.03 26 ER10a ExonRegion 0 7.38 5.94 2.77 16.28 11.30 15.79 12.91 12.99 28.59 13.25 3.92 51.41 12.08 22.16 7.23 0.66 63.29 35.39 6.73 36.35 184.93 113.87 105.37 27 E10a_E11a KnownJunction 0 3.78 3.35 3.49 10.45 15.37 26.12 25.08 16.18 36.37 13.78 6.58 50.87 13.64 19.07 0.00 0.00 70.59 37.93 12.33 39.37 176.81 131.41 104.57 28 ER11a ExonRegion 0 3.68 6.03 5.09 12.21 14.29 25.55 12.16 14.35 28.05 13.97 6.57 58.85 8.94 20.98 4.47 1.99 70.41 45.43 7.50 29.59 203.84 93.79 83.69 29 E11a_E12a KnownJunction 0 3.63 5.92 6.83 16.75 12.90 7.89 19.48 12.98 29.25 15.93 2.58 81.33 6.17 16.89 5.07 4.36 87.24 45.76 8.09 39.69 224.13 134.16 98.51 30 ER12a ExonRegion 0 7.38 7.75 7.65 16.83 8.01 16.40 14.70 11.51 22.18 8.71 10.54 52.83 11.95 12.49 0.17 1.04 67.18 46.09 8.13 27.91 190.23 104.14 108.94 31 E12a_E13a KnownJunction 0 7.26 0.00 7.18 23.41 4.16 31.06 16.91 7.56 11.92 7.23 7.37 40.06 6.82 14.13 0.00 8.37 59.56 41.16 0.00 30.10 101.99 51.19 122.67 32 E12a_E14a NovelJunction 0 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 1.71 3.41 0.00 0.00 0.00 2.47 0.00 0.00 3.65 0.00 0.00 5.37 2.97 8.57 0.00 33 ER13a ExonRegion 0 1.57 2.96 3.47 13.46 7.46 35.93 16.53 13.70 12.63 5.30 9.20 47.30 13.29 10.58 1.58 4.46 48.46 41.10 5.65 15.73 127.92 83.40 78.31 34 E13a_E14a KnownJunction 0 0.00 0.00 3.40 8.69 20.29 20.56 17.89 14.17 15.89 7.71 7.21 25.21 19.15 12.01 0.00 4.19 56.38 43.44 8.85 27.04 170.38 105.08 102.86 35 ER14a ExonRegion 0 2.56 8.80 5.75 13.80 16.92 28.42 18.47 19.49 18.79 13.55 7.06 33.41 9.85 17.70 1.21 3.96 49.13 53.06 16.27 24.15 148.35 105.58 115.29 36 E14a_E15a KnownJunction 0 2.89 6.71 13.19 21.84 18.76 29.87 18.33 22.71 22.16 12.25 7.90 12.60 12.99 27.67 0.00 6.84 30.39 65.95 20.89 13.29 148.02 142.86 125.23 37 ER15a ExonRegion 0 4.69 8.41 10.88 18.87 11.30 24.13 17.89 11.23 24.27 16.99 4.43 31.28 11.13 18.96 2.31 3.18 53.67 46.53 11.84 16.65 176.04 97.26 86.07 38 E15a_E16a KnownJunction 0 7.56 8.22 5.26 13.02 16.30 40.20 18.24 7.11 23.23 6.53 9.32 36.16 6.82 9.54 0.00 0.00 57.32 20.02 9.60 17.13 92.36 67.97 42.77 39 E16_Aa NovelBoundary 0 25.04 0.00 0.00 9.52 0.00 5.05 23.32 4.81 11.86 1.34 0.00 6.30 0.00 0.00 0.00 0.00 9.07 0.00 0.00 0.00 9.45 14.45 21.26 40 ER16a ExonRegion 0 19.96 3.31 8.43 17.94 12.42 24.36 16.39 6.68 19.23 10.22 8.59 32.39 3.36 11.13 0.00 0.00 48.45 12.20 8.57 17.94 89.62 63.41 58.15 41 E16_Da NovelBoundary 0 7.56 0.00 1.30 1.93 0.00 8.23 2.16 10.10 3.59 2.95 0.00 0.00 0.00 2.47 0.00 0.00 0.00 0.00 3.86 0.00 2.78 14.27 27.66 42 E16a_E17a KnownJunction 0 10.22 2.63 0.00 9.49 7.56 9.99 14.13 2.46 13.80 11.39 9.53 6.00 8.28 4.71 0.00 0.00 46.75 9.33 9.60 12.08 93.35 46.84 47.72 43 I16 Intron 0 5.16 0.90 0.81 2.25 2.97 2.44 3.52 7.42 4.08 1.52 0.00 0.00 1.90 0.66 0.45 0.00 3.66 0.00 0.71 1.89 3.91 11.09 10.42 44 I16_SR1 SilentIntronRegion 0 5.21 0.91 0.82 2.27 2.99 2.46 3.54 7.49 4.12 1.53 0.00 0.00 1.91 0.66 0.46 0.00 3.69 0.00 0.71 1.90 3.94 11.17 10.51 45 ER17a ExonRegion 0 9.27 4.95 0.67 12.34 8.51 16.57 14.56 11.12 15.79 10.78 7.59 14.96 10.83 17.13 1.90 0.00 47.35 10.25 6.83 16.09 53.69 53.87 34.33 46 E17a_E18a KnownJunction 0 10.67 8.62 1.77 14.82 31.41 33.05 32.90 19.51 20.51 12.97 5.05 19.36 6.82 27.84 0.00 0.00 61.62 11.36 8.85 29.53 36.20 59.03 35.94 47 E18_Aa NovelBoundary 0 0.00 0.00 4.46 16.98 11.71 0.00 0.00 3.57 6.22 1.67 0.00 0.00 7.30 0.00 0.00 0.00 0.00 2.49 0.00 6.52 2.84 6.00 7.43 48 ER18a ExonRegion 0 16.90 8.89 3.43 15.85 18.41 35.62 28.09 12.33 16.41 11.76 13.66 25.98 2.23 12.19 3.98 0.25 48.73 16.22 15.17 21.78 83.14 106.68 38.57 49 E18a_E19a KnownJunction 0 3.41 12.37 5.47 16.15 4.24 13.40 19.43 6.82 10.36 8.17 7.11 41.71 0.00 14.42 4.57 0.00 55.45 15.38 12.33 19.49 74.32 82.91 46.69 50 E18a_E20a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.29 51 ER19a ExonRegion 0 3.24 8.17 2.04 18.61 14.23 22.12 9.59 11.50 11.45 12.23 4.72 31.03 8.03 13.36 1.71 2.07 65.12 18.39 7.48 18.63 66.61 72.17 58.20 52 E19_Da NovelBoundary 0 11.19 0.00 0.00 17.45 7.72 0.00 9.45 0.00 3.21 2.90 0.00 6.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.53 3.67 53 E19a_E20a KnownJunction 0 6.30 9.87 0.00 25.67 4.33 35.77 18.81 19.59 19.01 13.05 2.63 62.42 8.28 26.43 6.06 0.00 80.97 17.33 9.60 15.40 75.18 102.32 60.52 54 ER20a ExonRegion 0 11.88 7.24 5.41 25.27 16.97 36.27 25.79 21.79 26.31 10.26 7.29 46.01 10.24 19.52 1.34 0.00 48.18 21.06 5.07 18.38 115.23 103.59 67.47 55 E20a_E21a KnownJunction 0 7.04 2.43 5.12 24.11 35.23 52.24 19.48 18.57 19.04 8.03 11.27 30.46 6.82 22.13 4.45 0.00 34.69 17.58 8.85 26.97 63.20 104.04 59.07 56 ER21a ExonRegion 0 12.79 6.38 7.36 28.48 21.69 40.43 21.85 16.62 19.33 7.92 5.47 50.43 10.61 14.95 1.33 0.00 36.58 10.71 7.26 16.90 65.17 100.85 64.99 57 E21a_E22a KnownJunction 0 13.04 3.35 3.25 21.51 7.56 43.90 35.29 11.17 12.07 10.42 4.58 37.81 15.10 24.13 0.00 0.00 29.64 12.52 4.61 8.56 73.70 87.07 37.90 58 ER22a ExonRegion 0 9.57 2.81 3.14 25.68 11.31 27.89 26.46 9.03 16.18 7.30 3.38 28.23 11.56 13.63 0.61 0.00 39.94 8.41 9.47 22.57 58.63 81.14 51.45 59 E22a_E23a KnownJunction 0 14.15 9.21 10.29 40.55 20.97 31.86 33.87 18.77 26.62 8.95 0.00 19.06 19.15 2.83 5.69 0.00 53.30 7.46 3.95 27.74 46.83 72.26 49.08 60 ER23a ExonRegion 0 14.22 8.85 8.53 31.43 15.58 46.21 30.37 16.98 24.05 12.16 6.64 73.51 16.37 16.82 1.09 1.52 59.48 7.47 13.14 16.58 56.13 103.68 48.21 61 E23a_E24a KnownJunction 0 12.82 15.00 6.59 19.98 18.68 42.19 14.26 21.77 16.52 13.73 2.37 69.92 13.64 10.12 0.00 0.00 41.61 2.11 17.88 11.06 34.35 79.54 32.18 62 ER24a ExonRegion 0 15.87 7.12 5.66 21.35 19.38 45.15 25.03 14.69 21.13 8.49 3.97 57.16 19.39 15.80 3.25 0.08 36.93 7.27 6.54 19.26 20.16 89.56 49.13 63 E24_Da NovelBoundary 0 3.41 3.09 0.00 6.89 11.12 16.92 4.50 0.00 3.07 1.24 2.68 12.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.00 2.78 13.59 4.35 64 E24a_E25a KnownJunction 0 39.49 8.88 8.93 31.43 36.59 48.89 22.13 24.40 31.28 9.24 9.42 25.96 40.09 10.07 8.90 0.00 35.34 4.19 4.61 32.09 23.10 116.40 58.39 65 ER25a ExonRegion 0 29.04 5.10 8.98 28.35 22.15 40.16 20.88 29.41 24.05 15.42 7.45 62.60 18.76 10.30 3.61 0.00 39.72 7.27 4.02 22.64 29.62 100.35 35.29 66 E25_Da NovelBoundary 0 3.33 0.00 2.72 4.53 0.00 2.90 0.00 4.23 4.48 3.14 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 31.35 7.94 67 E25a_E26a KnownJunction 0 17.26 11.84 7.54 23.07 25.55 37.82 31.36 25.96 20.69 17.54 4.63 63.77 12.99 12.36 0.00 0.00 39.93 5.89 9.04 3.26 14.27 87.38 20.40 68 E26_Aa NovelBoundary 0 14.52 3.35 4.79 8.42 10.87 8.35 1.72 3.98 6.11 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.51 0.00 0.00 11.92 13.23 13.06 69 ER26a ExonRegion 0 13.09 6.41 7.23 23.37 31.71 37.96 29.86 18.58 19.91 8.91 5.93 58.74 14.46 11.96 0.63 0.00 33.06 7.58 8.44 11.10 33.53 94.52 35.19 70 E26a_E27a KnownJunction 0 24.15 5.79 10.88 32.10 23.09 39.98 29.81 19.14 20.25 4.43 9.95 63.32 6.49 19.25 5.19 0.00 33.75 10.82 13.84 17.51 38.61 84.20 35.60 71 ER27a ExonRegion 0 22.67 6.35 9.86 40.76 18.33 46.73 27.30 17.96 20.35 13.21 6.07 65.98 15.20 13.99 3.68 1.40 56.88 21.73 13.57 23.11 58.97 117.10 55.17 72 E27a_E28a KnownJunction 0 46.97 12.23 8.34 33.46 35.23 48.72 31.84 13.55 17.65 20.07 9.32 67.67 25.65 24.07 0.00 0.00 64.05 32.33 9.60 14.57 68.57 161.23 43.11 73 ER28a ExonRegion 0 20.45 8.05 10.55 34.80 39.20 58.10 21.76 13.31 15.42 18.16 5.30 41.96 19.68 17.88 4.46 1.56 78.57 21.72 20.62 20.53 134.24 101.81 46.77 74 E28a_E29a KnownJunction 0 20.30 3.35 10.08 29.80 35.31 56.39 36.70 31.87 16.84 18.02 2.68 30.61 0.00 12.01 0.00 0.00 37.77 26.57 13.08 24.10 111.45 86.46 44.13 75 ER29a ExonRegion 0 18.29 6.74 9.80 31.91 25.62 45.59 21.73 21.17 19.90 18.59 4.63 43.29 7.65 20.96 0.04 2.08 56.39 20.65 10.87 26.14 97.14 135.40 58.81 76 E29a_E30a KnownJunction 0 44.30 11.97 6.98 39.92 44.31 107.38 34.45 16.22 14.55 21.41 9.00 44.11 0.00 34.61 0.00 0.00 89.95 16.46 17.04 26.46 156.67 197.54 74.95 77 ER30a ExonRegion 0 53.92 20.30 25.04 57.25 40.90 50.14 30.50 28.34 27.30 22.01 3.76 41.79 8.52 10.82 4.82 1.14 23.14 13.08 13.33 18.72 43.92 122.33 46.39 78 ER30b ExonRegion 0 6.73 4.07 0.00 0.00 0.00 0.00 3.25 0.79 1.24 1.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.09 0.00 2.46 0.00