Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SNX1 Gene 0 114.34 94.72 76.76 138.99 121.71 127.31 107.36 88.69 93.81 118.55 151.34 96.34 92.55 188.23 145.26 157.89 139.45 100.80 86.71 93.52 137.88 126.83 119.02 2 380285 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 261889 Transcript 0 0.00 0.00 2.96 5.99 3.06 10.11 0.00 0.00 2.78 2.95 11.74 0.00 6.49 9.42 15.08 7.60 12.72 8.66 0.00 0.00 2.72 12.80 7.34 4 353874 Transcript 0 0.00 0.00 0.00 0.00 3.65 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 4.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 440389 Transcript 0 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 IG28_AR1 ActiveIntergenicRegion 0 4.08 0.70 1.29 2.36 4.76 2.54 2.42 1.96 0.87 7.09 9.25 0.67 0.76 3.38 2.60 7.45 6.09 2.74 5.52 5.28 0.44 0.82 2.14 7 ER1a ExonRegion 0 8.47 1.51 1.32 0.35 2.18 4.55 6.08 0.51 1.05 1.66 4.30 0.32 8.16 4.03 8.27 8.37 5.26 0.68 1.77 1.89 3.10 9.88 5.22 8 ER1b ExonRegion 1 97.93 48.83 44.97 44.09 76.45 173.57 166.02 31.49 53.62 99.43 262.47 35.67 91.18 152.65 160.00 336.77 304.70 70.27 90.84 107.74 302.51 122.59 177.96 9 E1a_E2a KnownJunction 1 69.05 29.47 135.12 164.28 48.90 93.13 42.04 108.76 122.97 228.30 831.74 131.14 298.36 456.24 336.98 602.15 925.85 212.28 195.39 207.79 812.87 235.14 324.29 10 I1 Intron 0 17.24 19.43 8.09 13.24 16.09 6.29 15.60 5.71 4.34 6.21 2.32 9.69 13.79 2.27 9.18 9.05 7.74 5.60 7.39 10.87 5.33 3.53 8.70 11 I1_SR1 SilentIntronRegion 0 18.63 37.11 8.50 16.89 19.18 5.88 19.84 4.03 5.58 8.64 2.56 10.87 13.18 2.40 9.43 10.24 5.95 5.58 7.14 17.43 3.22 5.63 8.01 12 I1_AR2 ActiveIntronRegion 0 22.47 32.50 13.21 14.71 17.90 7.40 14.08 6.05 5.66 4.44 3.35 11.62 11.83 2.62 10.15 7.69 8.12 8.19 6.82 12.80 7.37 4.14 12.20 13 I1_AR7 ActiveIntronRegion 0 21.67 34.48 10.57 17.18 11.23 7.63 21.33 8.11 5.52 10.19 5.78 14.67 22.80 2.53 7.68 14.24 13.49 10.42 19.69 16.95 13.95 2.12 19.40 14 I1_SR4 SilentIntronRegion 0 15.94 26.42 4.82 15.79 15.11 2.86 11.99 3.75 4.84 6.38 2.86 17.86 22.25 2.12 6.51 9.52 8.86 4.13 5.36 10.70 11.15 3.13 5.82 15 I1_AR8 ActiveIntronRegion 0 13.31 33.62 11.39 20.34 15.31 6.92 18.14 8.38 3.94 6.60 3.88 14.71 17.44 1.90 11.30 8.89 12.12 5.15 7.90 14.09 7.87 3.99 10.18 16 I1_SR5 SilentIntronRegion 0 11.18 17.93 5.77 9.67 27.51 5.76 15.01 7.31 4.01 2.76 0.60 9.13 9.67 0.42 9.61 8.41 4.11 4.88 5.94 9.38 2.73 1.94 5.48 17 I1_AR9 ActiveIntronRegion 0 24.57 11.94 12.65 19.09 29.66 10.44 24.62 7.17 7.06 8.47 2.21 11.75 25.58 2.18 11.61 5.20 6.50 3.71 6.60 9.22 2.28 2.16 5.17 18 E2_Aa NovelBoundary 1 17.48 6.71 10.67 11.85 20.88 8.23 33.48 7.27 4.51 5.48 2.68 0.00 47.07 2.47 19.28 17.09 17.58 17.78 0.00 12.14 14.70 5.57 15.45 19 ER2a ExonRegion 1 80.64 48.19 113.97 146.15 88.44 58.88 65.76 118.01 138.07 236.57 631.76 144.07 283.08 661.83 478.09 1208.46 632.50 314.91 333.55 249.11 486.76 384.02 599.99 20 E2a_E3a KnownJunction 1 69.35 79.39 82.11 117.87 137.27 62.12 104.58 88.64 98.81 173.88 486.28 233.18 328.39 607.10 217.20 378.11 514.91 312.19 209.23 159.28 396.49 250.26 279.48 21 E2a_E3b KnownJunction 0 0.00 0.00 0.00 1.30 0.00 0.00 0.00 0.00 0.00 0.00 2.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E2a_E5a KnownJunction 0 0.00 0.00 2.96 5.99 3.06 10.11 0.00 0.00 2.78 2.95 11.74 0.00 6.49 9.42 15.08 7.60 12.72 8.66 0.00 0.00 2.72 12.80 7.34 23 ER3a ExonRegion 0 83.03 101.61 140.92 164.31 213.84 383.58 292.44 116.70 130.88 224.15 661.18 243.35 276.71 641.96 371.26 423.20 625.54 189.96 194.09 186.89 438.16 356.28 260.85 24 E3_Ab KnownBoundary 0 182.18 229.30 189.17 195.28 434.64 995.62 722.86 157.48 145.92 253.20 857.90 346.01 472.53 684.15 653.56 564.47 889.01 243.75 218.27 251.07 638.16 462.31 416.15 25 ER3b ExonRegion 0 110.99 182.97 120.39 135.06 170.60 398.87 287.78 108.85 122.79 209.55 623.10 324.50 429.08 600.57 434.06 435.74 641.18 149.13 142.95 208.67 451.22 350.49 260.14 26 E3a_E4a KnownJunction 0 180.33 189.57 104.43 132.95 98.30 160.08 172.32 104.62 115.59 189.35 502.18 283.89 428.06 623.29 361.46 530.03 484.90 201.63 150.12 228.70 352.38 346.34 177.64 27 ER4a ExonRegion 0 203.53 142.14 117.54 176.18 110.54 127.00 130.76 108.17 130.79 216.01 534.72 529.16 417.34 678.47 423.28 500.87 554.16 160.04 160.65 200.70 271.85 497.34 187.38 28 E4a_E5a KnownJunction 0 307.24 128.99 167.91 240.30 165.87 155.19 125.42 110.49 157.61 239.88 598.41 510.02 349.17 707.76 447.87 447.57 587.75 128.42 161.79 209.97 260.21 384.49 236.88 29 I4_SR1 SilentIntronRegion 0 5.86 8.27 3.45 8.78 6.86 4.71 15.13 3.86 2.77 5.15 7.14 18.43 20.41 5.19 5.45 12.39 13.74 7.84 8.63 15.36 6.72 5.85 11.65 30 I4_AR1 ActiveIntronRegion 0 3.99 6.69 4.11 9.78 4.63 5.84 13.26 5.35 4.60 4.70 9.49 19.07 23.39 4.03 2.72 8.97 13.43 2.86 6.34 14.50 2.29 7.58 7.37 31 I4_SR2 SilentIntronRegion 0 10.01 12.85 4.20 14.71 9.96 6.08 12.92 5.06 7.01 8.15 6.63 10.44 11.54 6.80 6.72 17.28 15.47 18.57 13.73 22.44 14.19 8.63 14.62 32 ER5a ExonRegion 0 285.78 130.89 173.95 235.35 170.09 196.88 134.44 128.53 156.33 256.93 791.70 457.45 368.91 912.76 480.22 553.29 641.50 161.17 185.48 205.27 347.23 427.93 302.61 33 E5_Da NovelBoundary 0 6.89 19.93 11.56 28.37 8.40 5.79 8.66 2.26 6.54 10.10 2.58 12.30 13.15 7.12 9.64 24.01 31.60 16.42 9.41 36.11 6.18 14.08 10.84 34 E5a_E6a KnownJunction 0 339.02 143.33 129.98 183.19 206.96 192.16 181.95 117.43 115.86 220.51 705.65 467.85 370.27 910.30 533.78 539.60 580.46 137.09 163.20 205.69 348.73 485.89 283.23 35 E5a_E7a NovelJunction 0 3.19 0.00 1.74 2.06 0.00 0.00 0.00 0.00 3.59 1.64 4.95 20.26 0.00 4.59 0.00 0.00 3.46 4.93 0.00 3.26 0.00 0.00 0.00 36 I5_SR1 SilentIntronRegion 0 17.38 14.28 8.46 26.37 21.62 7.29 18.59 10.58 8.29 11.32 15.87 21.56 22.37 10.47 8.82 21.26 17.49 10.23 14.35 17.19 11.38 15.74 15.95 37 ER6a ExonRegion 0 230.95 145.20 151.25 233.10 214.72 205.85 198.31 133.10 151.33 236.84 653.74 638.26 446.71 772.84 431.71 609.91 559.27 255.30 207.25 205.39 328.88 505.83 326.98 38 E6a_E7a KnownJunction 0 172.03 158.98 142.87 165.78 152.72 160.19 145.34 143.06 122.74 239.55 502.76 431.99 415.72 826.07 346.50 537.29 492.10 239.43 166.31 229.40 327.36 348.66 299.45 39 ER7a ExonRegion 0 172.75 148.48 152.88 236.04 186.73 184.35 171.56 148.45 150.73 255.75 635.58 468.84 386.48 949.41 454.03 672.08 631.22 208.37 231.73 224.21 453.55 396.32 351.54 40 E7a_E8a KnownJunction 0 214.33 168.98 146.59 250.48 156.54 149.35 169.23 152.67 139.87 246.83 614.16 395.08 427.89 1002.71 484.33 662.39 666.48 217.17 224.48 190.60 475.99 420.98 474.02 41 ER8a ExonRegion 0 191.24 156.85 149.61 197.31 159.21 193.68 158.81 133.96 132.95 218.18 599.61 448.78 408.77 864.74 479.89 630.29 568.75 321.90 224.27 207.45 438.02 367.55 384.55 42 E8a_E9a KnownJunction 0 215.37 127.41 210.43 201.84 201.95 175.92 147.15 136.45 156.13 254.33 552.56 430.04 264.11 781.69 449.60 612.75 536.23 380.79 225.14 190.03 438.74 346.77 390.96 43 ER9a ExonRegion 0 205.08 137.41 208.94 250.73 196.90 212.72 176.82 121.13 131.37 245.75 635.08 332.61 277.12 830.65 489.85 655.15 566.71 324.25 224.90 257.04 489.59 343.52 378.26 44 E9a_E10a KnownJunction 0 302.20 130.44 230.77 291.01 196.10 252.13 225.94 142.57 153.35 265.64 628.69 368.67 358.09 969.99 572.10 656.32 507.15 302.78 178.08 283.92 534.13 334.33 417.43 45 ER10a ExonRegion 0 223.63 117.43 184.87 221.00 149.16 156.50 134.26 120.51 140.40 227.81 627.21 298.23 219.98 802.00 564.45 616.15 523.37 330.24 203.83 227.39 499.61 370.89 344.81 46 E10_Da NovelBoundary 0 17.63 15.72 5.71 26.50 21.05 22.26 40.85 21.56 8.39 15.74 55.49 43.21 32.30 46.09 29.92 57.42 34.97 44.56 23.15 19.88 22.12 19.59 36.54 47 E10a_E11a KnownJunction 0 239.60 163.13 198.54 219.92 148.81 183.13 119.81 118.17 130.06 189.67 580.41 277.29 226.28 642.24 680.14 498.33 519.68 298.63 194.26 210.73 421.82 314.43 331.29 48 I10 Intron 1 31.86 11.44 11.48 25.53 24.05 20.12 24.38 18.46 13.30 20.92 37.30 17.44 27.18 50.16 31.17 48.34 45.13 36.92 19.85 24.87 28.67 24.01 27.20 49 I10_AR1 ActiveIntronRegion 1 21.97 11.89 9.02 25.79 21.84 19.59 22.95 17.13 10.58 15.16 34.87 17.73 25.30 46.30 31.91 43.43 42.92 30.46 16.37 25.52 24.65 19.11 28.41 50 I10_SR2 SilentIntronRegion 0 46.42 13.47 7.69 19.96 23.78 28.88 27.55 12.43 10.12 26.99 29.32 9.79 34.80 52.38 23.84 42.42 48.99 28.22 25.08 19.39 23.44 33.95 21.79 51 I10_AR2 ActiveIntronRegion 1 43.35 10.27 16.34 26.78 27.64 18.72 25.88 22.23 18.40 28.28 43.39 19.13 28.20 55.80 32.20 57.76 47.79 49.38 23.90 25.49 36.41 29.03 26.95 52 E11_Aa NovelBoundary 0 103.06 20.72 22.62 30.73 55.86 27.48 35.46 26.78 19.82 30.86 54.43 30.91 52.92 52.50 39.19 51.70 63.77 52.85 43.58 32.53 45.34 18.06 36.28 53 ER11a ExonRegion 0 285.67 124.04 163.48 195.96 137.48 139.19 144.90 121.32 131.49 212.83 594.42 235.39 175.47 674.80 570.18 502.88 501.48 310.20 170.19 193.14 450.54 257.08 284.10 54 E11_Da NovelBoundary 1 24.45 11.84 7.30 23.24 34.47 6.70 31.44 23.12 5.99 9.11 12.85 0.00 48.70 9.59 66.26 44.60 33.38 34.61 21.46 15.15 47.63 8.39 30.22 55 E11a_E12a KnownJunction 1 272.20 94.59 152.86 141.21 101.36 162.07 130.72 87.04 105.47 145.08 350.51 111.04 85.87 629.94 573.09 355.97 348.01 245.74 104.76 134.10 305.86 202.25 224.25 56 E11a_E13a KnownJunction 0 0.00 0.00 0.00 0.00 3.65 0.00 0.00 0.00 0.00 1.24 0.00 0.00 0.00 4.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 I11 Intron 0 15.18 6.82 10.52 21.65 14.30 10.52 14.45 13.34 13.33 15.46 20.79 15.17 26.86 30.11 20.82 36.85 29.16 33.57 20.33 17.96 28.59 19.86 26.63 58 I11_SR1 SilentIntronRegion 0 22.22 9.56 6.20 33.03 22.01 14.80 29.44 11.03 16.56 4.51 22.67 25.36 18.70 28.71 23.62 49.57 27.11 13.68 26.73 23.18 26.86 26.76 30.56 59 I11_AR1 ActiveIntronRegion 0 15.10 10.92 14.51 35.62 22.24 14.47 21.51 15.83 19.42 22.24 31.63 31.99 64.06 36.32 23.22 43.20 35.75 42.51 28.16 24.99 34.49 29.94 31.93 60 I11_SR2 SilentIntronRegion 0 11.93 2.35 9.53 23.29 10.85 14.35 11.70 17.62 15.32 13.71 20.56 26.05 38.17 30.08 15.54 47.44 37.04 44.80 23.23 26.09 37.61 19.69 23.94 61 I11_AR2 ActiveIntronRegion 0 10.11 3.80 7.58 17.07 11.69 11.12 10.62 10.01 9.41 17.14 18.37 8.89 15.87 29.43 17.96 30.56 26.95 25.32 19.45 14.26 31.62 12.75 24.51 62 I11_SR3 SilentIntronRegion 0 17.41 6.89 10.37 15.47 11.72 7.15 12.01 12.66 11.23 12.91 16.49 6.17 11.41 27.59 21.85 32.76 25.23 31.59 15.75 13.71 22.62 17.31 25.28 63 ER12a ExonRegion 1 195.54 98.64 134.19 111.08 120.28 149.99 127.62 63.69 82.91 136.23 394.70 107.09 109.69 464.87 537.07 325.94 359.25 161.25 103.55 138.30 385.59 221.34 208.60 64 E12a_E13a KnownJunction 1 367.03 131.62 208.77 190.82 257.30 199.37 201.21 123.84 107.96 194.13 524.19 99.18 162.33 611.63 757.53 539.43 346.61 223.02 221.94 180.50 365.17 327.23 307.99 65 I12_AR3 ActiveIntronRegion 0 27.12 8.10 10.23 28.46 13.93 12.55 17.71 10.17 12.97 8.05 13.50 7.48 9.69 12.86 8.18 21.00 19.23 20.80 10.24 12.81 17.23 17.65 20.71 66 ER13a ExonRegion 1 355.42 138.36 216.01 229.23 297.24 151.89 184.52 153.56 124.00 225.49 601.56 156.56 145.91 681.47 752.46 583.34 498.88 316.83 243.35 210.32 522.06 367.03 329.48 67 E13a_E14a KnownJunction 1 635.82 224.43 274.24 301.23 419.86 182.39 215.96 206.60 154.40 245.60 880.38 307.15 198.36 796.52 956.92 859.69 847.78 413.41 283.87 248.32 669.42 452.27 545.98 68 I13_SR1 SilentIntronRegion 0 10.63 15.67 12.71 29.53 9.89 9.90 12.68 4.56 9.70 10.75 5.40 5.37 5.00 5.96 9.20 16.40 9.60 16.64 14.07 8.74 8.15 5.73 3.84 69 E14_Aa NovelBoundary 0 7.33 52.23 27.62 44.15 21.14 5.28 12.14 8.75 11.20 4.86 5.37 18.31 15.10 4.77 5.07 20.76 21.69 12.15 4.61 11.76 19.71 11.88 14.68 70 ER14a ExonRegion 1 269.59 105.12 252.34 283.50 200.72 112.80 126.79 186.10 147.70 235.05 733.72 277.39 183.89 772.99 971.80 728.21 654.17 363.49 255.23 208.66 519.43 496.22 422.18 71 E14_Da NovelBoundary 0 22.97 28.42 40.92 48.78 41.34 38.84 43.81 25.67 24.77 42.39 39.54 12.60 5.84 46.56 37.83 69.04 40.77 83.74 12.80 43.85 20.39 30.86 28.94 72 E14a_E15a KnownJunction 1 194.40 65.98 281.21 314.08 133.79 86.26 106.83 174.65 154.83 249.84 558.83 211.57 72.88 583.20 796.96 454.67 479.66 240.35 220.15 125.15 417.61 348.23 315.67 73 I14 Intron 1 33.49 16.17 23.61 24.47 20.42 18.56 20.20 22.55 16.26 29.92 36.48 7.92 10.40 50.99 40.97 50.37 37.12 81.37 30.45 51.10 26.19 24.43 19.58 74 I14_SR1 SilentIntronRegion 1 33.75 16.29 23.78 24.66 20.57 18.70 20.36 22.73 16.38 30.16 36.77 7.98 10.48 51.35 41.28 50.74 37.40 81.97 30.68 51.47 26.39 24.62 19.72 75 E15_Aa NovelBoundary 0 21.63 6.45 28.30 4.20 7.98 16.24 14.00 22.71 10.71 16.57 54.59 0.00 6.82 36.38 26.95 49.47 17.20 49.16 12.24 38.03 20.94 22.60 16.48 76 ER15a ExonRegion 0 197.35 100.95 152.30 189.74 143.70 103.63 122.26 135.30 124.98 179.52 367.71 171.54 140.46 421.40 535.61 315.67 293.74 164.77 123.00 142.97 250.08 314.92 194.07 77 E15_Da KnownBoundary 0 55.19 97.02 8.66 53.44 74.19 66.50 107.76 43.42 87.82 73.25 23.58 31.66 21.75 62.75 4.33 42.72 29.36 30.34 23.72 40.78 50.23 82.60 68.38 78 ER15b ExonRegion 1 88.21 89.86 54.05 125.62 111.80 117.24 93.58 79.94 84.86 93.20 34.39 45.06 50.10 57.84 34.05 45.77 35.51 61.81 58.93 65.48 61.35 62.36 66.25