Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MTMR15 Gene 0 67.94 133.49 69.36 143.76 69.72 95.90 62.96 63.34 68.12 81.07 128.78 140.10 107.00 110.73 58.24 72.00 100.31 79.64 71.44 105.46 49.11 41.92 47.09 2 441675 Transcript 1 2.79 5.12 0.39 2.89 1.39 1.69 6.94 2.56 2.03 1.79 5.95 37.41 34.71 5.00 8.24 7.37 6.07 2.59 10.19 6.72 0.44 0.00 3.76 3 362065 Transcript 0 42.50 81.31 58.33 112.44 48.95 93.94 43.27 56.22 62.62 77.29 119.23 82.83 64.02 115.11 56.59 73.79 95.57 107.98 64.48 99.68 55.46 37.94 50.35 4 IG32_AR4 ActiveIntergenicRegion 0 0.77 2.94 0.66 21.31 1.90 3.29 0.99 1.86 0.65 1.24 70.28 1.29 12.21 14.79 0.74 0.00 57.36 8.65 6.87 5.34 5.58 1.51 2.12 5 IG32_AR5 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.83 0.00 0.00 0.01 0.00 0.00 0.04 10.02 0.00 3.34 3.80 1.03 1.28 11.41 3.57 0.00 1.84 0.00 0.00 0.00 6 IG32_SR6 SilentIntergenicRegion 0 0.75 1.02 0.36 17.89 0.47 0.11 1.12 0.71 0.50 0.38 7.58 0.39 14.16 2.06 0.18 0.36 6.63 1.24 0.91 1.96 0.51 0.18 0.51 7 ER1a ExonRegion 1 35.57 117.59 5.82 9.04 36.10 89.82 35.58 1.30 17.86 10.48 22.23 7.50 7.04 55.81 10.07 50.58 15.65 27.60 60.61 75.04 30.26 18.81 33.47 8 E1a_E2a KnownJunction 1 6.52 18.81 1.24 12.22 4.33 2.84 2.08 0.00 4.98 6.34 0.00 25.21 6.82 9.83 5.19 8.72 0.00 0.00 4.33 12.27 0.00 0.00 0.00 9 E2_Aa NovelBoundary 1 11.34 10.00 3.10 22.71 0.00 2.90 8.79 2.55 7.99 4.35 26.95 39.31 60.06 7.24 0.00 3.33 27.02 6.30 4.42 8.76 3.03 2.45 7.85 10 ER2a ExonRegion 0 21.49 132.06 39.01 96.26 48.54 84.26 71.49 46.13 62.79 74.40 137.49 244.36 175.72 120.23 35.71 68.52 119.56 66.70 77.90 125.09 51.67 44.91 46.63 11 E2a_E3a KnownJunction 0 50.53 115.44 52.72 94.09 71.05 123.34 110.10 83.09 81.60 95.87 122.14 197.31 100.81 119.78 32.14 104.76 101.92 90.99 107.86 122.98 62.33 77.58 66.67 12 ER3a ExonRegion 0 39.91 93.34 54.05 120.04 74.10 121.32 112.52 73.47 95.76 102.18 169.09 281.45 146.72 149.50 47.76 106.43 133.96 103.45 112.21 127.52 48.17 58.53 45.69 13 E3a_E4a KnownJunction 1 29.04 68.21 69.90 97.49 41.00 119.59 80.07 43.99 85.85 102.53 159.72 202.12 158.11 122.55 24.11 93.39 118.84 94.60 153.42 151.55 57.02 31.47 55.23 14 E3a_E5a NovelJunction 0 5.93 0.00 3.13 4.96 7.81 24.47 15.94 25.06 10.59 13.94 22.16 5.40 14.12 9.89 9.15 15.72 20.20 24.71 0.00 26.21 11.80 13.72 19.63 15 ER4a ExonRegion 0 15.93 98.30 49.71 108.52 44.77 102.82 62.92 60.15 82.01 78.41 156.52 233.64 142.63 133.70 42.79 100.58 128.10 122.03 116.01 131.51 78.78 49.79 57.00 16 E4_Da NovelBoundary 1 10.82 40.85 14.55 21.91 24.79 24.42 34.71 9.00 13.74 6.88 22.64 121.24 99.18 12.24 25.09 22.90 15.90 10.40 16.38 20.52 0.00 3.12 4.10 17 E4a_E5a KnownJunction 0 19.71 52.42 39.56 90.30 57.98 94.83 24.02 51.18 70.92 80.34 157.41 162.80 131.16 123.43 34.49 110.14 123.24 152.47 147.39 151.10 70.61 57.19 67.52 18 E4_Db NovelBoundary 1 0.00 59.59 30.45 25.50 19.02 27.20 67.70 21.19 11.17 2.82 19.53 25.21 65.74 39.73 33.50 20.25 27.49 2.57 24.00 18.73 3.15 0.00 7.00 19 ER4b ExonRegion 1 2.79 5.12 0.39 2.89 1.39 1.69 6.94 2.56 2.03 1.79 5.95 37.41 34.71 5.00 8.24 7.37 6.07 2.59 10.19 6.72 0.44 0.00 3.76 20 I4 Intron 0 5.26 21.30 11.33 23.10 6.25 11.33 15.46 8.35 5.92 8.28 14.85 19.79 30.53 12.14 5.78 5.22 11.44 4.20 10.56 9.40 3.43 4.13 4.64 21 I4_AR1 ActiveIntronRegion 0 7.01 35.13 19.14 30.11 8.72 16.63 24.38 14.00 9.70 11.51 14.17 25.09 36.40 13.24 9.93 5.17 9.50 3.00 13.16 11.09 2.39 6.90 5.10 22 I4_SR1 SilentIntronRegion 0 3.76 9.42 4.61 17.10 4.13 6.78 7.81 3.49 2.67 5.52 15.47 15.26 25.54 11.21 2.21 5.28 13.13 5.24 8.35 7.96 4.33 1.75 4.26 23 ER5a ExonRegion 0 26.57 92.53 47.85 103.33 49.16 104.96 55.10 63.72 79.78 89.91 163.74 136.64 137.77 147.77 59.19 101.80 137.03 152.72 123.62 142.16 81.54 46.32 74.28 24 E5a_E6a KnownJunction 0 32.30 136.75 46.27 128.02 54.41 133.11 66.77 54.38 65.22 103.42 138.51 116.14 118.50 130.14 76.77 95.96 126.23 172.69 121.79 133.59 78.83 56.89 53.52 25 ER6a ExonRegion 0 21.60 110.72 68.97 140.58 57.65 111.95 52.68 65.79 60.88 86.09 144.44 155.34 111.57 151.19 53.08 98.24 121.63 143.70 76.96 143.57 78.95 47.19 69.37 26 E6a_E7a KnownJunction 1 17.63 131.23 56.92 188.59 41.43 139.24 64.35 70.81 74.36 105.70 160.41 219.67 137.49 144.39 28.31 111.59 125.85 151.55 68.05 151.10 61.84 78.38 59.16 27 ER7a ExonRegion 0 22.08 99.25 65.77 149.47 66.94 119.75 61.70 68.85 67.32 106.84 150.31 177.35 136.10 154.56 45.83 100.32 130.31 138.36 69.29 123.85 71.08 60.50 59.95 28 E7_Da NovelBoundary 0 3.78 12.37 11.83 8.69 11.29 14.48 6.40 0.00 0.00 3.36 4.42 5.70 20.45 2.30 9.64 0.00 18.14 11.40 13.84 6.39 0.00 0.00 21.08 29 E7a_E8a KnownJunction 0 41.71 148.72 69.96 145.24 104.50 163.94 66.29 70.93 69.50 117.63 128.24 167.60 136.35 188.65 63.66 72.97 161.57 120.09 45.65 114.67 75.06 61.54 75.12 30 ER8a ExonRegion 0 25.19 116.20 51.83 111.63 37.62 106.36 53.18 58.18 70.31 92.88 133.26 134.29 88.33 131.08 50.53 73.54 116.16 112.10 73.24 95.30 47.01 43.51 56.21 31 E8_Da NovelBoundary 0 0.00 18.94 2.45 18.88 12.14 30.27 16.08 15.73 18.17 13.32 34.80 6.00 19.48 32.32 6.30 41.95 27.21 23.71 11.95 23.20 14.02 2.45 15.96 32 E8a_E9a KnownJunction 0 25.34 61.63 36.16 66.96 25.21 48.10 22.30 48.88 56.05 69.81 55.49 79.23 32.95 49.44 19.66 53.66 75.08 59.65 38.78 50.75 22.61 28.23 18.78 33 I8 Intron 0 4.59 17.86 7.45 14.44 8.53 16.49 14.40 8.89 12.65 12.82 22.69 16.94 22.79 26.33 6.51 15.23 31.67 25.00 13.32 26.64 8.81 5.39 10.21 34 I8_SR1 SilentIntronRegion 0 4.65 17.98 7.57 14.68 8.68 16.61 14.54 9.04 12.86 13.04 22.98 17.14 23.15 26.63 6.62 15.40 32.04 25.40 13.54 26.90 8.91 5.46 10.31 35 E9_Aa NovelBoundary 0 3.11 53.08 7.57 24.04 12.05 8.69 15.99 10.68 25.26 22.64 25.95 12.60 26.30 28.96 6.18 25.46 31.51 13.02 4.42 7.93 6.30 9.12 8.71 36 ER9a ExonRegion 0 18.05 81.00 39.44 69.98 30.34 62.62 36.52 46.85 58.01 64.91 84.66 72.71 41.76 102.16 38.49 62.67 77.28 71.01 47.05 81.50 55.40 33.53 46.38 37 E9_Da NovelBoundary 1 7.26 12.63 37.34 44.12 15.28 28.79 26.72 12.16 28.36 25.89 40.48 6.30 13.64 33.79 14.09 7.69 43.48 21.93 12.89 37.78 11.37 14.82 20.91 38 E9a_E10a KnownJunction 0 3.04 27.30 35.21 50.34 43.38 37.08 10.07 36.31 49.83 50.61 32.80 48.62 12.34 64.22 23.24 35.97 45.35 39.46 23.06 43.53 23.23 0.00 12.04 39 I9 Intron 1 6.30 20.45 13.30 24.38 10.98 13.74 19.03 6.61 16.05 18.94 48.00 13.46 12.03 39.76 11.66 18.30 40.65 46.93 19.29 34.93 19.66 8.77 13.55 40 I9_SR1 SilentIntronRegion 1 6.32 20.53 13.36 24.48 11.03 13.79 19.10 6.63 16.12 19.01 48.19 13.51 12.08 39.92 11.71 18.37 40.79 47.12 19.36 35.07 19.74 8.80 13.60 41 E10_Aa NovelBoundary 0 11.11 12.17 19.60 27.94 0.00 29.02 8.66 10.06 20.51 17.78 45.38 5.70 12.99 41.91 22.25 14.95 38.62 44.19 9.04 45.25 21.19 5.94 10.93 42 ER10a ExonRegion 1 10.83 35.34 42.13 58.50 22.56 53.75 29.04 38.53 48.73 54.86 91.41 25.86 19.32 95.45 41.79 42.53 76.55 86.97 42.11 85.06 60.83 28.74 40.37 43 E10_Da NovelBoundary 1 6.59 32.03 20.79 26.14 24.36 47.59 29.99 14.29 34.03 34.57 67.17 0.00 20.62 58.10 22.50 15.30 74.80 51.61 30.59 67.75 19.34 16.96 52.58 44 E10a_E11a KnownJunction 0 0.00 23.94 18.75 35.96 19.44 41.23 26.32 31.54 35.36 38.65 44.96 0.00 6.33 47.80 41.16 40.93 26.18 67.86 8.94 42.95 32.49 15.74 24.58 45 I10 Intron 1 34.28 31.11 43.68 75.38 40.10 53.52 36.18 34.91 42.83 49.23 93.25 41.28 49.35 73.78 35.62 46.26 77.85 60.84 34.89 55.57 31.47 24.22 34.92 46 I10_AR1 ActiveIntronRegion 1 34.31 31.13 43.72 75.44 40.13 53.57 36.21 34.94 42.87 49.27 93.33 41.32 49.39 73.84 35.65 46.31 77.92 60.89 34.92 55.61 31.50 24.24 34.95 47 E11_Aa NovelBoundary 0 50.38 27.17 15.17 53.47 51.10 41.96 43.19 20.13 10.45 19.93 86.97 56.42 42.53 46.15 49.32 35.38 65.83 15.05 49.32 34.45 9.27 17.57 39.95 48 ER11a ExonRegion 0 38.91 52.33 41.11 84.46 41.19 63.85 44.66 40.60 57.48 56.36 118.82 49.96 48.52 101.73 56.55 61.19 81.54 106.94 55.44 93.72 52.80 22.26 46.34 49 E11_Da NovelBoundary 0 38.97 26.64 21.61 74.22 35.91 31.86 40.19 22.22 28.62 22.38 34.64 25.21 66.72 32.73 16.44 48.28 34.69 56.29 21.93 38.80 18.10 29.21 36.79 50 E11a_E12a KnownJunction 1 33.41 78.74 74.21 100.02 36.33 81.66 59.13 28.18 39.93 57.59 124.77 57.32 12.99 81.88 61.81 59.04 76.20 94.76 58.92 98.69 35.46 32.27 63.94 51 I11 Intron 1 23.92 21.07 20.47 71.90 32.49 34.26 31.05 23.33 30.60 21.71 47.66 19.66 42.70 28.97 16.67 17.21 30.22 32.18 16.07 25.04 20.98 13.62 20.57 52 I11_AR1 ActiveIntronRegion 1 24.01 21.14 20.55 72.16 32.61 34.38 31.16 23.42 30.71 21.79 47.83 19.74 42.85 29.07 16.74 17.28 30.33 32.29 16.13 25.13 21.06 13.67 20.65 53 E12_Aa NovelBoundary 0 30.01 9.08 21.76 121.20 30.56 38.44 21.46 34.21 34.11 17.43 72.70 26.26 34.09 16.66 8.90 11.19 9.54 47.55 28.14 46.53 43.24 24.00 10.50 54 ER12a ExonRegion 1 47.57 44.46 62.09 99.30 41.28 89.56 31.83 45.58 51.87 64.39 145.49 38.34 54.67 112.41 68.98 66.13 80.39 108.51 62.99 108.10 53.53 31.14 56.35 55 E12_Da NovelBoundary 0 2.89 3.35 4.79 55.34 0.00 14.48 15.85 9.00 11.89 8.41 9.42 0.00 6.82 2.41 0.00 3.76 9.35 17.16 4.24 5.24 6.12 0.00 3.16 56 E12a_E13a KnownJunction 1 79.72 42.30 35.84 59.53 35.48 67.63 34.40 66.21 50.38 58.77 114.08 31.66 6.82 109.25 82.21 42.55 76.30 76.56 50.45 73.82 40.59 46.78 50.53 57 I12 Intron 0 1.15 4.60 3.96 35.26 3.87 3.81 6.58 5.59 6.16 4.02 5.94 7.35 34.33 5.83 3.49 1.61 10.45 13.62 6.34 6.16 3.38 3.01 2.66 58 I12_SR1 SilentIntronRegion 0 1.18 4.71 4.06 36.09 3.94 3.90 6.74 5.72 6.27 4.11 6.08 7.52 34.80 5.92 3.57 1.65 10.69 13.94 6.49 6.30 3.46 3.09 2.72 59 E13_Aa NovelBoundary 0 7.41 6.71 3.93 54.17 16.38 4.60 1.94 6.12 16.78 5.00 14.95 5.55 6.82 9.83 0.00 0.00 4.77 11.69 0.00 12.27 0.00 3.12 14.60 60 ER13a ExonRegion 1 45.48 35.66 57.08 109.04 32.63 75.36 21.92 54.05 64.62 61.91 111.93 13.26 21.27 101.77 63.45 67.30 75.49 110.69 50.97 92.50 51.95 24.03 42.80 61 E13a_E14a KnownJunction 1 107.43 49.73 85.72 158.09 34.80 129.19 39.44 79.40 75.90 81.58 121.72 18.01 27.11 141.03 85.42 79.04 92.85 117.31 67.58 106.61 64.31 20.76 68.21 62 ER14a ExonRegion 1 76.87 60.79 83.77 133.72 52.49 98.39 38.66 58.42 70.02 77.56 131.26 16.89 32.46 118.33 75.49 72.81 107.67 115.54 60.75 88.52 63.24 28.74 51.15 63 E14a_E15a KnownJunction 1 85.79 102.81 105.17 147.43 70.97 132.14 40.14 65.88 83.48 83.41 146.56 12.15 15.10 145.57 87.03 107.32 86.77 122.70 65.79 87.57 66.72 26.88 31.24 64 I14 Intron 0 14.28 2.04 5.77 5.15 10.88 4.56 7.16 5.30 5.90 5.15 5.64 7.92 14.41 6.03 4.37 6.40 8.21 2.81 4.88 5.70 2.21 5.78 4.36 65 I14_SR1 SilentIntronRegion 0 14.99 2.28 6.02 5.62 11.90 5.08 7.86 5.64 6.53 5.70 6.08 8.43 15.38 6.64 4.23 6.40 8.79 3.13 5.44 6.23 2.47 6.22 4.38 66 E15_Aa NovelBoundary 0 50.68 37.69 28.80 27.77 46.10 36.17 85.54 23.54 28.15 24.39 66.02 12.60 60.22 88.53 31.15 78.44 94.16 22.63 3.76 13.10 41.95 49.11 38.50 67 ER15a ExonRegion 0 155.86 205.07 119.55 243.27 121.02 112.00 73.50 92.61 77.78 97.22 122.70 88.35 79.51 90.27 87.93 67.57 82.96 53.98 59.76 84.41 32.08 44.01 39.92