Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 NIPA2 Gene 0 101.36 130.68 79.00 105.56 108.22 120.12 110.61 76.79 85.24 109.56 334.76 306.20 330.56 290.23 257.83 240.14 194.85 79.51 68.89 100.08 80.27 157.86 83.38 2 398013 Transcript 1 5.93 18.15 16.44 29.93 8.23 7.67 13.34 21.97 19.07 33.74 83.18 19.66 37.82 169.23 119.29 193.80 51.99 120.21 51.48 41.29 51.65 54.44 71.19 3 359727 Transcript 0 0.00 5.66 3.76 5.09 0.00 2.78 4.11 3.45 6.83 4.46 31.90 35.71 26.30 24.13 33.75 19.91 22.44 12.68 8.66 2.43 5.25 2.45 15.28 4 398014 Transcript 0 19.71 31.11 14.69 23.21 19.35 44.41 43.19 19.80 29.80 38.39 100.29 96.48 113.63 98.71 73.06 102.88 61.99 17.08 26.45 67.30 19.34 53.03 14.08 5 337451 Transcript 0 1.48 0.71 0.21 0.92 0.40 0.67 0.00 0.05 0.28 0.43 0.00 0.00 0.00 0.86 0.49 0.00 0.00 0.00 0.55 0.69 0.00 0.00 0.00 6 ER1a ExonRegion 1 9.70 17.57 18.39 12.47 12.45 46.43 19.94 15.72 23.57 35.03 140.18 5.80 13.03 112.76 91.89 78.38 100.65 28.43 22.78 41.14 60.07 32.26 29.64 7 E1_Da NovelBoundary 1 0.00 9.08 9.25 4.36 3.48 0.00 3.80 4.44 11.78 12.57 50.64 11.70 21.10 50.80 87.52 103.56 9.44 51.61 19.67 34.20 10.75 18.00 44.13 8 E1a_E2a KnownJunction 0 16.15 18.55 8.01 13.62 4.07 12.55 16.12 24.27 26.79 33.04 41.75 6.30 25.81 112.01 81.96 182.86 76.39 80.83 41.13 48.39 25.33 42.19 42.25 9 E1a_E3a NovelJunction 0 0.00 3.35 1.71 10.26 0.00 2.90 8.48 0.00 2.72 11.15 10.21 0.00 0.00 21.19 22.99 37.17 11.22 25.25 0.00 2.88 10.75 6.06 0.00 10 E1a_E4a KnownJunction 1 5.93 18.15 16.44 29.93 8.23 7.67 13.34 21.97 19.07 33.74 83.18 19.66 37.82 169.23 119.29 193.80 51.99 120.21 51.48 41.29 51.65 54.44 71.19 11 I1_AR1 ActiveIntronRegion 0 3.81 4.51 7.54 8.14 5.31 20.43 10.58 6.70 6.56 10.53 51.35 6.55 18.67 35.00 28.35 38.51 39.99 5.89 5.83 10.20 14.56 14.66 18.78 12 E2_Aa NovelBoundary 0 7.19 8.95 26.43 16.18 11.54 0.00 30.21 5.75 5.99 5.02 4.69 19.36 47.24 9.30 4.45 4.19 20.66 0.00 4.80 2.94 0.00 2.45 4.35 13 ER2a ExonRegion 0 24.64 43.99 29.38 41.07 50.37 164.33 90.22 44.89 51.48 65.13 210.12 127.31 165.32 196.82 99.15 176.23 138.59 53.18 40.85 70.17 38.40 79.27 43.60 14 E2a_E3a KnownJunction 1 16.89 27.03 15.32 14.88 21.22 57.92 29.06 37.46 29.69 38.65 100.03 79.08 62.17 98.89 31.28 71.01 83.87 20.27 27.29 26.27 44.05 47.15 0.00 15 E2a_E4a KnownJunction 0 19.71 31.11 14.69 23.21 19.35 44.41 43.19 19.80 29.80 38.39 100.29 96.48 113.63 98.71 73.06 102.88 61.99 17.08 26.45 67.30 19.34 53.03 14.08 16 ER3a ExonRegion 0 23.11 43.44 24.73 29.67 35.68 41.62 35.66 34.63 32.69 54.74 197.50 155.19 134.09 178.55 92.44 163.15 149.84 56.37 43.94 66.11 46.80 67.87 42.12 17 E3a_E4a KnownJunction 0 31.49 55.78 39.35 49.58 42.28 64.74 42.18 23.12 20.46 58.59 214.32 162.80 137.00 138.97 100.50 224.98 171.20 77.14 54.59 60.91 49.36 77.58 50.71 18 I3_AR3 ActiveIntronRegion 0 26.12 11.35 18.24 18.66 10.46 7.32 12.52 9.21 12.45 9.45 39.45 26.00 39.43 29.79 16.19 36.41 21.22 14.14 3.81 7.09 13.21 3.20 13.96 19 ER4a ExonRegion 0 76.59 122.98 96.25 128.96 109.46 187.70 120.95 85.25 112.47 161.83 516.38 400.72 347.71 598.12 330.27 466.85 369.98 171.56 117.91 162.83 164.38 189.13 162.74 20 E4a_E5a KnownJunction 0 99.35 165.43 89.59 101.75 160.70 196.93 128.78 96.40 111.20 150.05 620.89 353.22 216.38 710.52 374.81 467.91 391.58 181.15 211.77 185.23 283.99 180.88 168.08 21 E4a_E6a KnownJunction 0 0.00 5.66 3.76 5.09 0.00 2.78 4.11 3.45 6.83 4.46 31.90 35.71 26.30 24.13 33.75 19.91 22.44 12.68 8.66 2.43 5.25 2.45 15.28 22 E4a_E7a NovelJunction 0 0.00 0.00 0.00 1.50 0.00 0.00 0.00 0.00 2.60 1.21 12.48 0.00 6.82 0.00 10.26 0.00 8.13 0.00 0.00 0.00 2.97 5.69 0.00 23 ER5a ExonRegion 0 79.57 137.68 71.52 81.68 87.22 147.38 99.30 83.12 79.55 137.11 542.84 238.88 170.08 497.92 323.06 391.75 305.88 153.91 113.44 150.06 233.17 168.40 132.92 24 E5a_E6a KnownJunction 0 124.02 160.10 57.24 81.77 71.90 179.27 116.50 75.21 63.74 118.57 444.27 162.65 196.42 443.70 303.98 322.05 256.19 128.34 73.79 155.25 162.66 128.77 128.39 25 E5a_E7a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 2.44 0.00 4.76 0.00 1.67 23.58 6.30 0.00 2.47 4.82 29.65 4.11 0.00 0.00 0.00 3.15 0.00 0.00 26 I5_SR3 SilentIntronRegion 0 23.97 7.44 7.84 7.14 11.29 16.25 13.22 6.70 5.83 7.69 14.96 24.42 34.58 18.96 17.74 28.22 9.06 3.17 4.26 8.23 2.79 11.28 10.12 27 ER6a ExonRegion 0 95.24 150.95 82.91 103.98 105.35 161.66 129.30 73.53 91.95 157.68 509.01 211.72 261.56 476.51 383.22 415.87 340.75 186.72 111.98 162.15 207.22 216.32 159.61 28 E6a_E7a KnownJunction 0 155.73 122.02 114.19 155.86 229.88 309.25 198.91 92.66 155.32 199.29 762.72 267.99 377.41 760.73 542.93 604.12 462.65 295.07 205.18 253.37 198.06 330.48 254.13 29 ER7a ExonRegion 0 153.34 198.92 131.43 215.29 244.56 301.21 234.96 146.79 161.13 230.03 833.04 432.11 603.35 787.72 572.75 659.26 500.14 252.46 177.02 276.32 208.87 311.73 238.73 30 E7a_E8a KnownJunction 0 195.15 229.63 98.40 228.08 263.24 385.46 245.90 153.78 135.79 196.41 778.51 761.35 693.95 604.39 480.50 607.45 440.21 293.66 126.03 251.64 272.99 297.41 237.14 31 E8_Aa NovelBoundary 0 11.71 9.27 8.90 4.43 17.91 7.15 24.42 4.15 14.64 5.67 2.37 13.95 0.00 4.59 6.18 17.17 11.69 9.24 27.39 13.81 0.00 3.12 8.71 32 ER8a ExonRegion 0 174.08 214.99 124.96 165.55 169.75 154.71 167.50 118.75 128.27 154.27 439.07 502.17 540.89 346.59 373.12 290.22 233.35 85.80 88.22 125.51 85.55 238.55 101.16 33 E8_Da KnownBoundary 0 34.97 21.90 12.98 8.19 6.79 23.11 2.12 2.05 0.00 7.63 2.21 5.55 26.46 0.00 5.32 3.85 0.00 0.00 4.14 5.50 2.41 2.57 0.00 34 ER8b ExonRegion 0 1.48 0.71 0.21 0.92 0.40 0.67 0.00 0.05 0.28 0.43 0.00 0.00 0.00 0.86 0.49 0.00 0.00 0.00 0.55 0.69 0.00 0.00 0.00