Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PAK6 Gene 0 1.28 7.61 6.18 15.48 1.42 19.69 1.92 4.98 21.10 12.99 0.48 2.42 4.36 17.55 18.09 1.21 5.08 9.41 2.28 14.60 0.54 0.21 0.33 2 441369 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 0.00 0.00 0.00 0.00 3 453867 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 455577 Transcript 0 0.00 2.89 0.00 1.90 0.00 2.24 0.00 0.00 0.00 1.32 0.00 0.00 3.17 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 260404 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 ER1a ExonRegion 0 3.60 6.91 0.39 0.43 5.12 3.90 17.45 4.34 4.08 1.48 3.70 1.52 1.64 7.84 3.48 8.21 6.31 17.81 6.09 6.84 0.00 0.89 0.00 7 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.95 0.00 0.00 0.00 0.00 0.00 8 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 Ix_AR1 ActiveIntronRegion 0 17.48 42.72 12.60 16.46 9.68 4.12 27.35 7.22 4.56 7.71 13.76 14.50 7.94 10.83 7.51 8.14 11.65 13.27 3.74 22.17 0.28 1.07 0.38 10 I1_SR1 SilentIntronRegion 0 0.71 10.39 3.85 2.67 6.08 1.72 16.04 7.25 4.43 5.92 5.24 14.21 2.31 6.29 2.62 3.47 7.98 7.04 4.62 9.94 0.23 0.99 0.31 11 I1_AR1 ActiveIntronRegion 0 2.76 13.03 6.76 5.93 15.05 3.09 25.87 10.01 4.08 10.52 7.57 13.73 4.19 9.43 4.42 10.32 12.79 15.56 6.34 18.83 0.00 0.89 0.00 12 I1_SR2 SilentIntronRegion 0 8.41 28.82 9.33 7.53 13.26 3.91 25.80 13.72 6.17 10.50 5.14 7.79 2.46 6.14 3.78 5.33 4.73 8.54 5.55 12.77 0.15 0.68 0.10 13 I1_AR2 ActiveIntronRegion 0 3.79 23.02 5.66 6.37 6.83 2.52 14.26 12.28 3.97 8.88 1.28 8.84 2.49 1.40 1.16 1.29 0.74 1.32 1.16 7.19 0.00 0.47 0.03 14 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E2_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.92 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 1.44 0.51 0.00 0.00 0.00 17 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 0.00 1.89 3.29 0.64 0.00 0.84 0.00 0.00 10.30 7.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.39 0.00 7.36 0.00 0.00 0.00 19 E3a_E4a KnownJunction 0 0.00 6.12 10.32 1.93 0.00 2.21 0.00 2.05 18.23 5.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.49 0.00 11.06 0.00 0.00 0.00 20 E4_Aa NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.94 11.50 0.00 0.00 0.00 0.00 3.00 0.00 0.00 0.00 21 ER4a ExonRegion 0 0.40 9.62 7.49 10.65 0.00 8.87 0.53 0.46 21.46 11.93 0.00 0.00 0.00 8.43 16.40 0.00 2.15 6.47 0.00 11.49 0.00 0.00 0.00 22 E4a_E5a KnownJunction 0 3.78 12.17 16.62 8.02 0.00 38.56 1.63 3.53 37.53 14.21 0.00 0.00 0.00 12.07 10.14 0.00 4.49 10.28 0.00 11.70 0.00 0.00 0.00 23 ER5a ExonRegion 0 0.30 5.07 9.42 14.85 0.00 22.15 1.14 3.56 28.21 15.45 0.47 3.48 2.83 16.77 18.91 0.00 6.98 14.45 0.79 15.44 0.00 0.00 0.00 24 E5a_E6a KnownJunction 0 0.00 15.00 6.33 4.33 0.00 14.93 2.25 2.42 19.56 12.79 0.00 0.00 0.00 16.54 8.90 0.00 9.44 14.26 0.00 8.50 0.00 0.00 0.00 25 ER6a ExonRegion 0 0.00 3.94 7.43 11.39 0.63 20.46 0.89 4.79 23.68 11.93 0.00 2.96 7.69 22.42 20.66 0.46 6.56 8.74 3.22 16.84 0.52 0.00 0.00 26 E6a_E7a KnownJunction 0 0.00 6.05 3.78 15.65 0.00 26.63 0.00 5.83 37.07 15.31 0.00 0.00 19.15 15.54 4.45 0.00 11.87 15.55 0.00 14.57 0.00 0.00 0.00 27 ER7a ExonRegion 0 0.22 3.86 4.28 11.86 1.64 16.58 1.23 5.06 18.58 12.32 0.00 2.24 5.99 22.41 15.30 0.93 5.43 9.97 0.33 20.12 0.45 0.00 0.30 28 E7a_E8a KnownJunction 0 0.00 8.42 4.49 16.05 0.00 13.29 0.00 6.45 32.81 16.49 0.00 0.00 6.82 24.13 41.66 0.00 4.58 10.40 0.00 34.71 0.00 0.00 0.00 29 ER8a ExonRegion 0 0.81 7.59 5.40 17.86 1.02 18.73 2.10 12.25 28.04 19.27 1.47 1.74 2.59 24.91 20.91 2.20 2.51 10.52 4.83 21.37 0.00 0.00 1.12 30 E8a_E9a KnownJunction 0 0.00 6.05 7.78 23.87 0.00 23.40 2.25 16.59 34.75 13.16 0.00 6.30 0.00 17.48 19.16 0.00 4.58 18.82 0.00 31.45 0.00 0.00 0.00 31 ER9a ExonRegion 0 0.00 9.72 8.53 17.71 0.19 22.93 1.80 8.68 29.10 20.60 0.00 5.39 3.10 24.11 25.38 1.19 2.31 17.78 2.61 22.32 1.77 0.00 0.12 32 E9a_E10a KnownJunction 0 0.00 8.55 9.58 24.67 3.40 23.11 2.16 13.51 34.87 21.17 0.00 12.60 0.00 28.43 23.49 0.00 4.58 14.59 9.60 15.47 0.00 0.00 0.00 33 ER10a ExonRegion 0 0.30 15.70 7.39 15.88 0.89 31.93 3.26 6.38 39.67 28.16 0.32 5.60 6.74 28.45 18.49 0.00 11.58 17.93 9.05 21.34 1.78 0.84 2.26 34 E10a_E11a KnownJunction 0 3.63 18.48 8.81 20.48 0.00 39.69 1.68 0.00 31.22 30.60 2.53 0.00 6.82 45.38 8.90 0.00 8.98 20.64 0.00 13.87 0.00 0.00 0.00 35 E10a_E12a KnownJunction 0 0.00 5.79 0.00 3.80 0.00 4.49 0.00 0.00 0.00 2.63 0.00 0.00 6.33 0.00 8.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 ER11a ExonRegion 0 1.33 9.64 8.80 12.87 1.47 42.49 1.15 2.48 30.14 31.31 1.05 5.32 5.66 25.01 21.17 0.00 16.26 15.47 4.77 16.44 0.00 0.00 1.11 37 E11a_E12a KnownJunction 0 0.00 9.14 6.59 13.92 7.64 60.42 0.00 4.52 37.59 27.56 2.05 0.00 20.45 23.66 29.54 0.00 16.83 9.91 0.00 20.39 0.00 0.00 0.00 38 ER12a ExonRegion 0 2.49 11.25 7.38 24.31 1.89 24.42 0.78 5.93 22.66 13.67 0.39 2.26 4.29 17.40 23.04 1.17 4.20 7.57 1.56 14.05 0.79 0.34 0.38 39 ER12b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 IG10_AR2 ActiveIntergenicRegion 0 0.21 1.68 1.22 1.28 0.00 16.97 0.09 0.62 0.36 1.29 0.00 0.00 0.00 0.58 0.53 0.00 0.00 0.02 0.00 2.37 0.00 0.20 0.28