Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CASC5 Gene 0 11.98 32.54 12.77 11.71 30.03 36.81 103.02 29.30 10.28 48.18 160.62 221.23 139.77 164.66 33.57 107.69 142.02 66.91 24.71 116.35 2.21 15.67 3.78 2 260369 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 399668 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 346991 Transcript 0 0.92 2.26 0.00 0.00 1.66 0.04 3.16 0.00 1.64 0.00 8.15 5.54 2.79 9.11 5.80 15.18 9.50 8.06 0.00 8.94 0.48 0.00 1.92 5 ER1a ExonRegion 0 0.44 1.55 2.07 0.00 7.47 5.20 21.90 2.11 0.54 4.32 13.06 9.71 6.61 41.00 3.77 43.10 35.26 28.58 4.84 22.96 0.00 0.74 1.04 6 E1a_E2a KnownJunction 0 3.78 2.57 4.32 0.00 7.81 0.00 7.29 5.83 1.27 8.30 9.53 18.46 12.99 10.54 0.00 18.97 11.41 8.66 0.00 11.95 0.00 0.00 0.00 7 ER2a ExonRegion 0 0.85 2.78 3.79 1.13 5.56 1.45 11.94 3.56 1.71 19.72 83.86 26.31 22.37 58.59 6.81 38.52 82.84 28.21 8.51 40.02 1.57 1.52 0.00 8 E2a_E3a KnownJunction 1 0.00 5.92 3.31 2.06 0.00 5.74 18.90 2.14 6.54 24.10 173.78 69.02 73.53 112.43 18.42 48.45 142.50 35.65 0.00 85.39 5.75 5.69 0.00 9 ER3a ExonRegion 0 3.33 9.51 4.99 4.36 2.07 2.80 7.68 3.02 4.23 22.02 156.08 95.25 56.98 162.29 20.53 76.38 160.42 94.42 28.59 90.74 5.78 8.54 5.95 10 E3a_E4a KnownJunction 1 3.78 12.50 5.17 5.43 4.33 0.00 2.25 4.44 3.30 16.63 112.55 63.92 45.45 253.87 21.14 114.50 166.53 124.24 50.35 115.63 2.59 10.90 7.60 11 ER4a ExonRegion 1 2.58 3.86 4.08 4.36 4.41 1.83 11.19 9.74 7.43 14.78 88.01 70.57 45.18 165.28 11.36 181.20 98.64 150.93 22.62 91.24 3.23 7.15 8.12 12 E4a_E5a KnownJunction 0 3.56 3.35 2.63 0.00 7.30 7.15 18.06 14.33 9.11 21.52 85.92 45.31 75.81 82.76 6.30 126.55 66.76 126.89 8.09 92.10 2.97 0.00 13.06 13 ER5a ExonRegion 1 3.31 12.00 3.12 1.49 9.93 15.47 49.18 11.57 5.40 25.62 116.04 140.57 97.58 104.86 5.52 82.79 91.15 86.19 27.49 70.38 4.30 6.75 7.63 14 E5a_E6a KnownJunction 1 3.78 25.19 3.28 2.06 8.66 15.90 116.41 16.47 7.00 22.56 150.14 232.28 93.66 133.03 12.36 29.99 105.28 42.16 13.27 74.66 2.29 9.00 0.00 15 ER6a ExonRegion 0 2.96 31.77 2.36 3.99 16.41 17.96 94.03 16.70 7.76 22.96 141.58 175.79 108.22 150.49 16.26 44.30 87.69 40.86 14.48 103.85 3.16 13.05 0.00 16 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 3.48 0.00 6.40 0.00 1.56 0.00 7.00 0.00 6.82 6.89 0.00 7.18 8.51 8.71 0.00 13.04 0.00 0.00 0.00 17 E6a_E8a KnownJunction 1 7.48 40.45 1.83 3.16 27.59 8.01 66.64 14.38 4.86 16.95 137.14 106.83 125.64 130.32 0.00 23.58 95.47 32.83 7.34 102.08 5.81 8.14 0.00 18 ER7a ExonRegion 0 2.77 6.78 0.00 0.00 1.51 0.12 3.07 0.00 1.81 0.00 8.23 10.77 1.56 13.08 17.41 17.76 15.79 13.57 0.00 7.77 1.44 0.00 5.76 19 E7_Da NovelBoundary 1 569.36 335.34 313.27 318.51 402.72 228.05 376.66 405.89 388.16 281.27 189.84 47.42 72.07 39.97 126.34 580.79 431.14 404.29 349.28 388.30 168.78 118.79 331.29 20 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 9.21 5.85 0.00 7.36 0.00 20.59 4.21 1.91 0.00 6.01 0.00 0.00 0.00 21 ER8a ExonRegion 1 3.11 25.60 1.51 2.85 18.81 13.59 55.18 15.61 7.19 29.04 135.87 144.78 151.05 150.90 2.65 62.24 94.85 54.40 18.08 112.58 2.07 12.87 0.00 22 E8a_E9a KnownJunction 1 0.00 15.72 0.00 2.06 16.04 19.65 62.27 11.75 3.30 23.07 125.93 194.61 174.34 139.44 5.81 71.43 72.93 47.67 30.87 105.85 0.00 16.53 0.00 23 ER9a ExonRegion 0 2.90 9.47 2.29 2.47 12.60 13.80 47.21 13.37 9.39 33.29 159.26 227.41 211.05 154.98 13.82 73.29 103.46 61.80 35.88 107.22 0.00 23.19 0.00 24 E9a_E10a KnownJunction 0 7.56 12.17 3.31 3.86 7.47 14.25 43.68 14.05 10.56 23.24 175.47 243.53 263.13 176.94 14.59 86.56 140.63 55.22 36.61 123.81 0.00 38.39 0.00 25 ER10a ExonRegion 1 6.31 18.76 6.01 2.13 1.31 9.76 50.98 16.66 8.09 30.75 192.12 289.67 223.17 186.84 13.03 98.47 122.20 68.79 14.66 126.90 0.04 24.61 0.00 26 E10_Da NovelBoundary 0 0.00 5.66 4.67 1.93 4.33 0.00 5.74 13.60 1.77 4.92 10.42 12.45 18.67 2.12 17.80 0.00 7.76 0.00 0.00 12.53 0.00 0.00 0.00 27 E10a_E11a KnownJunction 1 6.82 12.37 7.16 3.50 0.00 9.71 43.41 21.24 5.24 33.20 167.52 318.85 116.71 229.56 4.45 86.39 87.70 56.87 4.80 112.05 0.00 13.35 0.00 28 E11_Aa NovelBoundary 1 3.78 3.35 1.83 5.59 0.00 2.67 19.52 9.20 0.00 6.72 11.95 24.76 27.27 0.00 20.64 0.00 0.00 7.17 9.60 21.60 0.00 0.00 0.00 29 ER11a ExonRegion 0 6.66 25.85 8.01 8.83 19.36 30.38 84.89 23.57 9.52 42.72 164.03 254.80 144.31 151.69 20.09 99.33 146.62 58.91 18.53 129.52 2.23 16.81 3.26 30 E11_Da KnownBoundary 0 6.00 86.56 7.48 10.75 41.85 42.99 191.40 53.19 12.59 63.93 134.51 150.20 215.25 133.26 35.73 105.53 135.76 38.26 27.48 99.77 2.35 28.35 0.00 31 E11a_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 ER11b ExonRegion 0 28.59 80.77 12.17 15.34 54.80 51.57 153.24 39.85 11.82 53.45 103.22 213.07 163.53 130.02 37.56 79.22 94.71 49.79 22.00 102.78 0.76 16.81 2.00 33 E11_Ab KnownBoundary 1 48.82 75.05 17.09 12.69 35.74 86.83 145.87 27.03 7.18 54.23 74.23 217.57 176.61 120.84 33.87 84.85 48.15 52.27 30.21 142.54 4.88 18.19 0.00 34 ER11c ExonRegion 0 36.29 57.19 22.83 19.98 55.34 73.71 142.99 40.77 12.50 63.30 107.16 210.98 172.73 161.98 37.01 95.62 85.58 60.43 25.95 132.59 4.41 20.43 1.22 35 E11_Db KnownBoundary 0 59.20 63.41 22.15 26.64 82.09 71.21 202.71 49.37 18.29 61.62 126.56 193.71 127.91 182.41 52.78 94.85 124.82 44.52 28.99 120.42 0.00 34.54 3.76 36 ER11d ExonRegion 0 29.78 79.63 20.03 17.44 63.99 74.71 269.24 50.24 14.99 72.79 163.90 210.58 166.33 226.42 49.32 140.00 147.97 62.73 25.26 99.85 0.91 24.21 4.30 37 E11_Dc NovelBoundary 1 0.00 0.00 0.00 1.73 0.00 0.00 13.07 2.42 0.00 2.53 14.37 24.01 8.28 0.00 22.99 14.95 8.70 2.57 0.00 15.15 0.00 0.00 0.00 38 E11c_E12a KnownJunction 0 20.67 75.45 20.37 16.12 59.68 105.05 261.71 50.73 8.94 73.68 141.56 152.30 158.43 222.32 56.86 85.11 127.26 72.83 12.89 105.66 5.25 21.37 0.00 39 E12_Aa NovelBoundary 0 0.00 9.34 0.00 4.86 7.56 18.91 31.58 1.81 0.00 4.06 12.00 30.16 35.22 40.50 14.09 19.31 20.76 2.03 0.00 17.13 0.00 0.00 0.00 40 ER12a ExonRegion 0 15.64 67.49 21.46 15.52 51.71 52.43 175.41 50.70 14.05 74.73 194.92 277.58 254.58 253.89 56.15 204.58 166.07 138.89 52.02 115.49 2.66 23.68 7.71 41 E12a_E13a KnownJunction 0 7.56 87.16 15.40 19.51 23.26 39.18 104.22 60.63 17.42 91.22 169.99 391.63 279.69 323.09 33.13 199.18 191.21 160.22 66.45 122.15 5.68 13.41 11.95 42 ER13a ExonRegion 0 3.92 64.12 24.17 11.02 34.82 34.19 99.69 51.24 16.15 76.86 223.25 219.34 181.74 320.12 51.16 153.37 210.97 119.34 58.18 133.23 3.95 17.10 4.10 43 E13a_E14a KnownJunction 0 6.82 80.31 18.57 11.22 51.36 33.62 155.63 51.01 10.97 72.45 313.45 110.29 165.74 236.15 52.66 118.17 244.79 73.08 43.77 142.15 7.17 8.02 0.00 44 ER14a ExonRegion 0 38.44 94.53 16.61 15.71 46.65 77.11 217.37 68.20 15.93 87.48 253.95 248.22 235.59 292.77 51.81 227.83 203.62 168.48 64.61 127.25 4.12 18.20 6.32 45 E14a_E15a KnownJunction 0 54.90 97.22 30.93 24.84 37.18 102.95 236.31 70.40 21.96 107.74 209.00 321.25 210.86 295.13 49.20 269.50 181.77 190.27 71.25 127.45 2.97 14.45 3.76 46 ER15a ExonRegion 0 39.27 59.11 21.49 20.14 56.79 72.36 217.65 47.13 12.19 61.21 196.41 274.66 244.57 240.54 51.80 134.33 180.33 91.13 44.98 131.88 2.17 19.04 7.62 47 E15_Da NovelBoundary 0 10.45 8.55 1.33 3.96 0.00 2.90 17.84 9.98 1.53 3.12 2.58 6.45 0.00 5.47 0.00 7.26 7.85 1.62 0.00 2.49 0.00 0.00 0.00 48 E15a_E16a KnownJunction 0 24.45 48.41 13.45 11.89 46.01 52.30 169.41 40.79 4.31 48.59 176.47 189.21 165.41 208.90 30.16 115.78 178.77 105.66 25.13 74.40 0.00 9.25 8.45 49 ER16a ExonRegion 0 18.12 65.25 10.84 21.06 60.07 46.49 168.86 30.77 10.83 46.63 154.19 191.92 140.39 221.18 40.36 110.65 151.15 74.46 28.84 95.53 0.00 13.92 1.52 50 E16a_E17a KnownJunction 0 14.08 121.69 12.57 22.41 45.93 66.55 235.03 29.94 9.35 45.32 162.30 157.40 144.96 172.05 46.48 92.28 172.23 29.39 39.44 81.24 0.00 10.47 4.10 51 ER17a ExonRegion 0 23.48 83.19 18.55 20.18 48.58 48.76 163.25 34.16 14.17 50.54 156.35 173.47 125.67 202.96 36.01 113.53 163.49 68.56 23.20 106.60 0.00 15.07 3.84 52 E17a_E18a KnownJunction 0 18.52 36.84 27.91 13.92 40.58 27.94 181.64 32.57 13.22 43.27 114.98 121.09 158.43 217.26 58.22 115.27 161.38 78.60 17.22 95.94 0.00 8.45 0.00 53 ER18a ExonRegion 0 29.80 32.91 26.97 20.27 50.96 61.79 146.16 40.25 15.37 56.78 140.82 171.60 117.68 210.10 54.20 109.73 162.19 52.56 29.43 101.57 0.00 12.45 2.77 54 E18a_E19a KnownJunction 0 27.04 42.23 32.23 22.67 80.05 88.30 153.16 53.27 10.73 72.34 137.40 174.21 102.10 242.75 64.40 133.30 154.37 78.35 24.38 90.25 0.00 21.92 8.11 55 ER19a ExonRegion 0 25.67 52.35 30.65 23.12 68.44 66.58 182.04 41.64 15.14 69.62 186.97 180.23 135.95 221.03 66.88 161.94 154.00 109.61 45.17 99.89 0.90 14.05 4.56 56 E19a_E20a KnownJunction 0 30.15 78.54 24.16 21.38 81.24 84.33 176.12 38.61 15.83 59.10 202.95 299.65 153.40 214.55 83.57 187.64 161.48 85.85 32.10 94.85 3.09 8.82 0.00 57 ER20a ExonRegion 0 27.83 68.07 21.90 22.08 50.91 56.99 181.12 40.32 12.75 93.93 252.00 243.86 149.38 217.23 74.92 159.31 207.13 95.76 39.58 99.52 1.05 17.92 4.11 58 E20a_E21a KnownJunction 0 43.86 71.83 21.76 23.31 47.37 47.87 242.28 35.36 6.31 101.54 285.23 252.23 175.80 268.41 112.86 149.62 239.36 78.43 47.15 123.68 0.00 32.21 7.60 59 E21_Aa NovelBoundary 0 3.70 0.00 3.13 3.00 3.99 0.00 11.00 0.00 0.00 4.27 2.32 0.00 6.98 4.65 0.00 3.25 4.02 6.01 17.60 5.75 0.00 0.00 0.00 60 ER21a ExonRegion 0 38.41 70.44 32.08 24.79 65.35 56.96 201.71 37.28 11.27 84.61 243.11 242.75 154.40 272.72 90.37 168.71 224.56 111.10 62.36 121.94 3.59 15.89 8.09 61 E21a_E22a KnownJunction 0 56.68 60.38 31.10 21.64 84.04 77.51 223.73 49.17 11.43 87.84 272.23 221.92 135.38 396.08 127.82 161.24 232.35 148.73 77.18 150.46 6.12 17.15 4.35 62 ER22a ExonRegion 0 33.42 44.03 30.67 36.27 60.06 84.59 169.51 50.66 11.32 90.91 230.59 224.92 181.75 262.59 96.37 161.85 206.68 143.15 46.52 135.43 4.89 18.11 7.50 63 E22a_E23a KnownJunction 0 41.27 67.22 32.67 34.53 50.76 77.00 171.22 70.61 10.97 79.00 234.06 278.49 224.34 219.91 85.67 132.02 218.05 86.80 45.74 127.00 2.72 16.90 4.10 64 ER23a ExonRegion 0 18.71 56.23 29.87 32.12 55.92 58.68 138.54 60.60 13.59 64.56 229.23 249.54 185.97 304.79 113.49 194.18 204.03 91.72 61.21 134.54 0.57 11.44 5.15 65 E23a_E24a KnownJunction 0 10.67 57.29 39.68 35.83 77.59 67.18 129.75 53.93 14.47 49.24 192.42 281.19 136.84 394.61 114.10 205.93 188.59 89.71 72.66 192.14 0.00 28.53 11.69 66 ER24a ExonRegion 0 40.50 65.57 31.98 28.69 91.53 65.57 182.02 58.45 14.59 66.24 207.75 193.37 155.67 267.68 89.07 171.46 153.25 117.50 49.17 122.44 6.29 19.53 5.79 67 E24_Da NovelBoundary 0 15.56 14.41 19.69 14.18 26.15 11.75 98.35 44.85 2.58 15.63 30.48 64.07 58.60 60.86 19.66 20.51 25.62 24.17 0.00 31.45 0.00 3.06 0.00 68 E24a_E25a KnownJunction 0 13.34 45.91 16.65 8.09 67.57 31.57 104.40 48.92 16.67 58.29 211.42 129.94 182.62 188.42 49.57 140.90 161.01 59.73 69.84 71.72 2.41 12.00 7.51 69 I24 Intron 0 2.77 14.36 9.55 6.35 14.68 11.03 25.61 17.52 3.37 10.72 15.17 17.05 28.79 25.89 11.29 13.20 9.50 10.35 4.15 19.48 0.00 2.18 3.07 70 I24_SR1 SilentIntronRegion 0 2.80 14.51 9.65 6.40 14.83 11.15 25.88 17.70 3.40 10.83 15.32 17.23 29.09 26.15 11.41 13.34 9.59 10.45 4.19 19.67 0.00 2.20 3.10 71 E25_Aa NovelBoundary 0 7.11 36.57 33.85 15.55 18.59 29.19 15.24 28.51 4.69 15.55 22.64 38.11 13.31 37.67 8.90 12.65 4.11 19.65 12.61 32.47 0.00 0.00 7.85 72 ER25a ExonRegion 0 20.86 59.04 23.50 11.76 74.94 59.34 180.56 49.65 14.24 54.34 184.32 182.17 152.25 224.72 85.87 121.88 142.30 55.71 42.59 92.19 5.04 12.50 6.47 73 E25_Da NovelBoundary 0 11.04 39.40 17.36 11.55 71.05 38.67 101.62 27.77 6.74 18.16 27.38 11.55 13.96 57.15 13.47 40.59 17.77 23.79 25.88 37.84 0.00 0.00 4.35 74 E25a_E26a KnownJunction 0 18.89 47.43 29.15 14.98 106.96 49.40 184.29 40.42 5.73 58.29 177.52 168.35 135.22 239.39 93.45 99.97 165.50 39.96 49.51 87.12 3.15 17.51 4.35 75 E26_Aa NovelBoundary 0 60.08 19.73 23.30 14.15 79.71 51.28 79.76 49.00 5.70 36.16 32.06 6.30 19.97 55.92 25.47 53.32 46.28 65.37 30.31 34.71 0.00 0.00 0.00 76 ER26a ExonRegion 0 46.65 34.74 44.72 22.66 78.51 53.93 134.12 68.90 14.25 89.94 218.24 172.86 141.46 255.44 120.06 181.98 170.95 117.08 61.48 111.66 3.21 16.01 3.13 77 E26a_E27a KnownJunction 0 56.90 44.73 39.97 25.14 94.06 63.37 187.82 49.21 12.09 79.27 179.84 120.19 46.43 149.33 93.45 114.24 151.66 63.09 33.88 96.13 0.00 13.35 0.00 78 E27_Aa NovelBoundary 0 17.11 2.57 3.49 3.56 8.57 0.00 22.04 14.70 0.00 4.41 24.90 0.00 0.00 30.73 24.48 31.27 39.27 21.93 13.65 12.40 0.00 0.00 0.00 79 ER27a ExonRegion 0 17.77 27.45 27.85 19.68 55.23 53.73 127.27 44.65 13.29 66.11 117.93 97.22 83.83 125.76 69.95 93.94 96.64 53.49 29.96 68.78 1.29 11.14 5.16 80 IG26 Intergenic 0 26.26 46.81 24.08 22.82 40.87 32.94 55.03 40.40 12.42 41.86 37.28 58.65 43.52 38.83 47.71 26.37 18.55 11.48 10.92 37.06 1.00 11.84 2.16 81 IG26_SR1 SilentIntergenicRegion 0 2.80 4.04 1.21 1.35 0.00 15.79 6.14 0.00 2.44 2.26 10.24 17.04 7.67 12.53 14.69 13.78 13.12 6.70 10.55 0.00 0.00 0.00 1.95 82 IG26_AR1 ActiveIntergenicRegion 0 41.20 101.87 46.48 31.89 82.05 57.54 119.37 81.21 14.98 86.97 87.17 116.04 68.81 82.35 98.95 53.67 39.54 22.46 19.31 73.50 0.70 17.17 2.18