Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ATPBD4 Gene 0 7.38 10.67 12.15 13.46 8.17 13.49 8.76 8.09 7.28 8.65 7.88 29.38 18.23 18.75 16.85 12.19 18.74 5.25 9.22 6.84 4.59 10.81 7.42 2 440392 Transcript 0 0.32 0.78 1.32 0.84 0.45 0.09 0.67 0.94 0.71 0.93 1.56 1.30 0.97 1.55 2.66 1.22 2.45 1.66 0.42 2.50 0.71 1.49 1.10 3 256538 Transcript 0 20.90 30.35 28.25 33.64 16.31 39.20 20.71 12.92 15.48 20.59 31.63 91.46 48.61 71.44 63.67 28.60 56.97 10.12 25.84 13.84 11.60 27.54 13.11 4 ER1a ExonRegion 0 0.00 0.68 0.44 0.87 0.00 0.00 0.15 1.30 0.55 1.53 1.23 0.00 0.00 3.92 2.42 2.89 2.11 4.57 0.44 3.31 1.96 0.00 2.94 5 E1_Ab KnownBoundary 0 0.00 2.76 1.15 2.76 3.57 2.38 0.00 2.30 1.19 5.00 5.37 0.00 0.00 17.07 4.45 7.09 7.67 10.53 0.00 6.46 5.50 0.00 10.76 6 ER1b ExonRegion 0 13.35 10.13 10.33 6.81 3.28 47.30 13.13 10.41 7.23 11.12 11.20 0.00 0.57 35.60 40.44 49.01 47.36 31.03 13.46 14.68 24.11 8.25 25.47 7 E1_Da NovelBoundary 0 10.96 6.71 0.00 0.00 0.00 2.50 0.00 0.00 0.00 0.00 2.16 0.00 0.00 0.00 0.00 0.00 4.30 4.44 0.00 0.00 0.00 0.00 0.00 8 E1a_E2a KnownJunction 0 50.08 21.84 29.95 17.45 16.04 140.71 33.12 21.65 18.84 19.72 30.43 0.00 0.00 80.88 76.02 113.99 115.29 54.72 50.54 41.23 44.54 23.02 48.23 9 E1a_E3a NovelJunction 0 0.00 0.00 0.00 1.53 0.00 16.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER2a ExonRegion 0 17.22 16.03 19.80 13.64 11.24 39.59 13.04 18.81 14.96 17.71 28.71 14.77 21.18 36.00 32.46 50.21 61.15 27.95 28.94 16.48 31.64 9.54 26.74 11 E2a_E3a KnownJunction 0 9.78 23.94 5.32 0.00 0.00 0.00 7.68 4.07 6.92 8.00 20.22 24.46 0.00 32.55 23.61 0.00 26.46 10.28 0.00 9.08 10.32 7.47 0.00 12 ER3a ExonRegion 0 6.50 22.40 30.16 22.68 7.86 19.03 9.20 18.40 18.29 12.37 27.53 36.78 24.73 58.78 65.62 52.53 65.35 31.10 32.54 27.60 31.42 18.64 25.63 13 E3a_E4a KnownJunction 0 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 4.45 0.00 4.11 0.00 0.00 2.56 0.00 3.12 0.00 14 E3a_E5a KnownJunction 0 9.93 36.64 31.52 29.80 11.46 64.96 23.58 13.06 12.62 8.65 33.85 101.88 71.10 71.40 42.03 21.45 38.06 8.87 40.10 25.95 8.83 14.02 11.35 15 ER4a ExonRegion 0 0.97 1.65 0.61 1.65 1.36 0.28 1.85 1.51 1.59 1.26 0.76 3.90 2.92 0.73 1.13 0.76 1.14 0.40 0.81 1.63 0.17 1.35 0.37 16 ER5a ExonRegion 0 16.13 28.66 33.07 36.58 14.97 64.28 17.96 17.61 17.16 11.70 42.00 94.08 57.36 78.11 66.42 39.48 75.70 11.46 43.43 21.25 14.23 33.79 20.24 17 E5a_E6a KnownJunction 0 48.45 32.49 54.20 55.34 16.64 59.06 26.14 17.83 27.63 20.82 59.91 100.98 59.74 99.48 93.33 43.92 88.73 10.36 52.52 23.59 18.97 40.72 27.49 18 ER6a ExonRegion 0 25.93 34.33 35.11 44.79 10.97 36.77 19.68 17.52 15.37 24.55 52.87 117.88 48.79 84.06 75.87 36.54 90.01 16.66 27.95 21.40 13.85 37.10 21.07 19 E6a_E7a KnownJunction 0 20.23 38.35 24.95 39.62 34.38 13.80 20.89 6.33 13.08 27.94 40.80 129.49 44.96 67.57 56.25 26.57 65.73 6.67 17.88 3.26 19.89 33.00 20.23 20 ER7a ExonRegion 0 21.40 33.98 22.31 34.56 27.36 17.39 24.41 14.75 10.80 25.77 37.85 115.57 60.59 65.59 80.53 22.87 70.01 11.62 30.57 7.00 15.25 26.92 15.01 21 E7a_E8a KnownJunction 0 25.34 42.30 30.57 30.00 19.44 19.99 23.45 20.78 15.05 30.35 33.75 88.08 60.39 86.53 104.33 11.79 26.37 8.08 4.52 18.66 11.80 26.09 3.41 22 ER8a ExonRegion 0 14.99 27.87 28.07 31.45 13.91 41.23 18.19 10.66 20.62 26.05 23.13 96.75 41.37 88.95 66.15 40.80 77.66 17.02 31.75 14.96 12.97 30.24 10.88 23 E8a_E9a KnownJunction 0 13.63 25.19 27.73 38.96 6.62 67.97 25.57 10.93 19.39 27.64 23.90 79.53 20.62 81.05 47.84 31.70 48.15 10.61 19.29 9.33 11.80 28.41 0.00 24 ER9a ExonRegion 0 13.56 26.64 20.05 27.29 7.15 31.24 14.16 9.07 13.53 16.33 22.25 79.21 40.98 46.69 53.38 30.26 48.95 10.50 14.62 9.82 6.26 20.08 9.18 25 E9_Da NovelBoundary 0 0.00 0.00 0.00 2.06 0.00 4.32 9.85 2.55 0.00 1.58 0.00 12.30 0.00 9.24 0.00 4.02 4.77 0.00 0.00 5.50 0.00 3.12 0.00 26 E9a_E10a KnownJunction 0 28.52 21.71 9.93 12.05 15.96 32.03 18.81 2.51 9.40 12.71 4.32 48.02 46.10 67.40 63.04 25.55 37.59 6.26 16.75 2.94 3.15 22.11 7.68 27 I9 Intron 0 2.99 2.32 6.38 3.11 4.73 3.02 4.11 3.54 4.62 1.88 3.72 18.51 18.92 8.02 5.78 5.02 7.52 1.77 0.50 4.43 0.61 4.50 3.11 28 I9_SR1 SilentIntronRegion 0 2.76 2.27 7.41 3.92 5.03 2.91 4.36 3.69 3.89 2.21 3.03 19.88 21.67 7.65 3.22 4.22 5.04 1.22 0.56 4.31 0.39 4.74 1.75 29 I9_AR1 ActiveIntronRegion 0 3.51 2.45 4.37 1.50 4.18 3.31 3.66 3.28 6.21 1.23 5.19 16.00 13.59 8.93 11.13 6.74 12.71 2.93 0.38 4.74 1.06 4.09 5.95 30 ER10a ExonRegion 1 12.73 16.02 21.46 23.28 16.87 21.65 15.67 13.95 11.11 14.61 4.95 46.11 31.34 20.46 14.89 12.30 16.71 3.37 10.65 7.91 2.17 18.06 10.82 31 IG32_SR27 SilentIntergenicRegion 0 2.39 3.84 1.11 6.11 7.07 6.58 4.85 4.39 4.01 2.29 1.40 10.68 20.87 5.10 2.40 6.45 4.26 2.07 2.54 4.61 0.89 4.70 5.10 32 IG32_AR36 ActiveIntergenicRegion 0 11.18 5.32 6.23 14.94 8.40 10.32 5.31 4.84 5.47 4.65 0.94 8.20 9.48 3.90 5.81 2.30 3.63 1.35 2.89 2.73 1.82 3.11 4.03 33 IG32_AR12 ActiveIntergenicRegion 0 17.43 23.19 5.78 11.26 6.78 3.19 2.52 4.49 6.12 1.35 0.00 0.56 1.84 0.26 1.76 1.41 1.05 1.31 5.55 5.05 0.00 0.00 1.40 34 IG32_AR8 ActiveIntergenicRegion 0 3.89 19.60 0.98 6.60 4.50 1.83 2.22 1.73 6.57 1.15 0.00 0.00 0.00 0.52 0.00 0.00 2.77 1.85 5.73 9.36 0.00 3.25 0.00