Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CHAC1 Gene 0 8.54 2.88 34.25 59.35 2.33 6.05 3.54 7.09 10.23 18.50 31.24 36.07 67.39 19.28 37.89 42.29 45.80 28.27 32.21 17.34 13.09 8.41 19.93 2 446533 Transcript 0 0.37 0.00 2.32 1.43 0.94 0.15 0.00 0.98 1.06 0.27 0.60 0.00 0.00 1.66 0.00 0.00 1.74 0.97 0.00 0.13 0.05 1.57 1.03 3 444189 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 397434 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 249798 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 487220 Transcript 0 2.21 0.09 1.39 5.21 0.23 0.80 0.17 0.38 0.21 0.95 1.51 1.51 4.89 1.06 5.55 3.88 2.87 2.73 7.20 1.02 0.48 0.27 0.89 7 ER1a ExonRegion 0 0.37 0.00 2.32 1.43 0.94 0.15 0.00 0.98 1.06 0.27 0.60 0.00 0.00 1.66 0.00 0.00 1.74 0.97 0.00 0.13 0.05 1.57 1.03 8 E1_Ab KnownBoundary 0 0.00 0.00 6.24 0.00 0.00 2.90 0.00 0.00 1.48 0.00 4.84 0.00 0.00 2.53 0.00 0.00 0.00 0.00 0.00 3.07 0.00 5.45 0.00 9 ER1b ExonRegion 0 0.05 0.00 1.70 1.70 0.00 7.29 0.09 5.03 1.24 0.96 5.01 0.00 0.00 1.25 0.00 0.27 3.98 0.00 1.67 1.89 2.20 1.70 0.13 10 E1_Ac KnownBoundary 0 0.00 0.00 1.15 3.50 0.00 10.16 0.00 9.00 0.00 3.17 1.95 0.00 0.00 0.00 0.00 0.00 15.33 4.10 4.80 0.00 0.00 0.00 0.00 11 ER1c ExonRegion 0 3.17 1.84 18.75 27.69 0.24 4.45 1.52 2.71 3.97 10.27 16.97 20.21 15.43 13.08 28.04 26.96 29.42 10.74 13.97 15.93 7.98 5.82 18.92 12 E1a_E2b KnownJunction 0 2.89 2.43 32.64 65.69 7.64 24.70 2.25 4.81 6.25 17.08 45.06 41.26 65.90 22.01 79.98 62.21 56.47 26.90 21.08 26.65 14.39 5.45 32.86 13 E2_Ab NovelBoundary 0 14.60 0.00 1.36 9.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.32 0.00 4.45 3.76 0.00 4.64 9.51 0.00 0.00 0.00 0.00 14 ER2a ExonRegion 0 2.21 0.09 1.39 5.21 0.23 0.80 0.17 0.38 0.21 0.95 1.51 1.51 4.89 1.06 5.55 3.88 2.87 2.73 7.20 1.02 0.48 0.27 0.89 15 ER2b ExonRegion 0 10.10 0.29 32.10 74.10 4.97 16.45 3.59 8.05 8.22 18.48 37.44 31.05 61.24 22.69 59.93 50.36 66.30 33.10 27.03 25.47 7.18 6.55 26.51 16 E2a_E3a KnownJunction 0 14.15 0.00 31.08 73.48 0.00 10.96 3.97 7.06 12.09 18.62 32.06 54.17 54.87 12.42 33.99 45.71 59.93 33.20 36.05 31.32 0.00 10.65 33.72 17 ER3a ExonRegion 0 10.48 2.03 31.39 72.33 0.32 5.89 2.52 3.50 10.91 27.94 34.65 70.51 41.76 25.56 51.12 46.21 68.69 41.35 40.58 41.03 5.72 10.32 33.21 18 E3_Da KnownBoundary 0 18.67 8.55 37.02 84.97 0.00 5.28 6.32 0.00 11.98 41.64 46.17 60.02 58.60 45.85 62.43 59.13 93.88 52.48 66.54 38.73 14.58 9.12 29.79 19 E3a_E3b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.41 20 ER3b ExonRegion 0 15.62 5.52 52.59 107.79 4.58 7.58 6.23 8.81 17.86 34.81 57.21 52.69 93.08 28.15 50.20 54.50 76.79 48.61 40.82 31.59 17.40 10.97 28.74 21 E3_Ab KnownBoundary 0 20.82 5.26 62.68 113.37 3.82 4.32 4.33 9.16 18.34 33.66 52.70 54.17 97.88 17.07 37.46 89.72 65.92 50.61 57.41 32.41 10.44 7.72 24.84 22 ER3c ExonRegion 0 12.28 3.68 56.19 94.76 0.75 8.10 5.18 10.26 15.01 27.72 41.26 50.23 90.51 32.32 52.27 60.82 66.09 57.70 48.83 25.68 16.46 11.24 21.76 23 E3_Db KnownBoundary 0 23.71 0.00 79.09 137.98 7.39 17.26 1.81 14.87 10.21 31.16 61.38 38.26 42.69 21.07 85.42 59.64 93.41 32.33 41.79 29.91 11.37 17.08 16.13 24 ER3d ExonRegion 0 15.63 5.10 59.38 95.74 5.93 11.55 6.97 14.65 19.90 29.64 59.71 56.46 137.04 28.73 60.19 78.28 76.72 44.09 51.41 25.65 22.33 13.80 34.96 25 E3_Dc KnownBoundary 0 7.11 5.13 54.14 95.39 0.00 15.84 12.23 9.04 18.32 37.07 38.64 37.81 115.90 32.55 91.97 54.60 27.21 28.11 70.21 33.75 31.07 6.25 47.55 26 ER3e ExonRegion 0 8.56 3.22 33.57 64.13 2.03 3.64 3.26 6.30 9.03 19.30 26.58 46.72 87.71 20.18 43.65 42.28 42.36 26.81 46.65 12.36 18.61 9.19 16.97 27 ER3f ExonRegion 0 1.32 0.00 0.92 3.92 0.00 0.00 0.83 0.86 0.00 0.29 0.00 1.08 0.00 1.02 0.00 2.97 0.00 0.00 0.00 2.13 0.00 0.00 0.00