Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DNAJC17 Gene 0 57.75 48.02 70.33 68.92 32.47 55.95 49.33 65.62 47.44 68.32 73.47 26.08 16.52 82.76 107.67 83.94 82.76 74.55 69.76 59.88 61.12 33.04 45.68 2 220496 Transcript 0 63.14 50.23 77.54 79.78 31.05 49.21 45.55 74.54 52.07 73.53 81.92 32.35 16.34 87.72 120.55 85.00 93.62 78.41 65.37 66.18 64.27 36.73 42.79 3 ER1a ExonRegion 1 113.10 85.76 47.75 49.67 37.74 119.65 108.17 79.13 49.56 67.90 69.81 4.33 5.45 60.32 68.33 137.79 70.17 92.04 146.22 67.70 67.69 29.19 91.68 4 E1_Da NovelBoundary 0 0.00 0.00 7.69 5.23 3.14 0.00 0.00 6.98 3.99 11.93 19.16 0.00 0.00 11.54 13.35 38.45 7.39 12.60 16.19 11.70 5.68 16.72 11.61 5 E1a_E2a KnownJunction 0 31.71 28.22 28.77 33.13 30.39 21.92 22.21 38.90 27.49 28.77 30.11 31.06 7.14 7.12 24.48 28.71 15.80 45.68 19.20 8.56 18.59 5.45 6.74 6 I1_AR1 ActiveIntronRegion 0 6.22 10.51 8.75 21.82 6.07 5.22 9.90 10.41 5.78 5.14 1.59 6.80 3.82 1.08 4.67 9.65 7.63 6.40 4.82 13.98 0.50 2.23 6.56 7 I1_AR2 ActiveIntronRegion 0 12.14 5.11 9.09 17.38 10.89 3.78 6.22 12.23 6.42 8.85 1.02 4.18 3.29 1.04 2.65 10.36 4.20 4.86 3.46 9.58 0.96 2.33 1.78 8 I1_AR5 ActiveIntronRegion 0 2.53 3.92 7.75 12.27 12.85 0.00 6.57 6.94 6.97 7.31 6.04 7.42 10.30 2.64 8.76 20.65 14.15 8.88 1.76 9.57 0.59 0.00 8.08 9 ER2a ExonRegion 1 17.26 21.50 32.61 40.21 13.11 11.47 12.86 45.31 27.15 50.79 77.67 23.63 14.87 25.64 43.81 16.52 87.29 28.46 10.88 26.26 71.15 7.02 7.68 10 E2a_E3a KnownJunction 1 13.11 12.50 64.55 69.39 4.07 24.64 15.32 97.22 53.59 103.47 175.47 5.85 6.66 51.09 128.69 51.35 174.47 30.47 22.59 75.42 144.44 16.66 16.82 11 ER3a ExonRegion 1 19.01 13.20 86.81 95.03 19.32 17.62 21.48 117.97 70.30 118.27 110.44 34.27 1.75 132.60 147.23 87.70 104.62 94.45 90.49 96.07 99.80 49.72 56.49 12 E3_Da NovelBoundary 0 28.82 3.16 0.00 7.13 0.00 0.00 6.49 4.56 3.50 1.48 0.00 0.00 0.00 0.00 0.00 4.36 9.16 2.45 8.19 6.20 0.00 0.00 8.45 13 E3a_E4a KnownJunction 0 42.97 27.76 101.30 135.15 8.66 5.34 12.10 142.53 79.69 113.87 60.70 25.21 12.66 150.10 166.76 162.35 77.51 196.28 208.38 98.24 64.43 80.40 109.18 14 ER4a ExonRegion 1 42.76 25.19 88.69 102.34 66.86 52.91 42.05 81.41 57.64 78.46 78.83 36.36 35.65 82.48 116.87 185.72 89.76 117.37 179.94 74.78 63.06 44.42 128.08 15 E4_Da NovelBoundary 0 3.26 9.41 10.38 17.21 32.77 20.10 22.39 8.71 0.00 7.39 0.00 0.00 6.17 9.54 13.35 12.65 31.04 7.59 0.00 9.27 2.59 5.51 0.00 16 E4a_E5a KnownJunction 0 51.71 36.38 104.17 92.20 76.15 102.95 101.09 58.86 45.37 69.52 67.49 32.41 20.62 74.22 114.10 89.29 71.06 66.86 22.97 39.18 53.56 22.90 33.72 17 ER5a ExonRegion 0 45.46 99.08 78.49 69.65 55.16 170.67 134.87 44.22 33.02 54.28 66.71 30.05 23.01 86.59 106.17 55.47 76.96 48.75 17.26 36.17 64.93 23.84 33.16 18 E5_Da NovelBoundary 1 0.00 0.00 3.13 2.06 0.00 0.00 6.58 4.11 3.33 0.00 0.00 0.00 0.00 0.00 4.45 33.75 0.00 15.71 0.00 5.94 5.50 5.57 8.54 19 E5a_E6a KnownJunction 1 100.98 148.07 85.36 105.15 41.00 65.76 45.18 56.76 40.19 63.77 71.60 35.56 13.15 84.53 109.52 44.43 100.70 54.26 36.14 50.94 52.51 35.88 34.49 20 I5_AR1 ActiveIntronRegion 0 25.42 5.76 4.92 4.57 3.22 3.41 7.86 5.86 6.35 7.18 6.28 3.17 1.78 10.09 7.79 13.18 5.17 19.38 7.52 7.01 6.73 10.82 14.19 21 E6_Aa NovelBoundary 0 14.89 2.70 3.64 7.09 0.00 14.08 4.06 8.34 6.77 4.94 4.69 6.30 0.00 6.89 9.64 11.71 4.77 24.66 4.61 7.67 8.03 8.33 0.00 22 ER6a ExonRegion 0 126.53 74.55 83.01 89.57 37.10 40.42 45.71 66.00 58.25 69.49 82.58 40.21 9.28 98.42 136.69 88.98 88.72 93.57 51.98 62.73 63.82 39.54 37.45 23 E6_Da NovelBoundary 0 10.89 2.89 3.99 8.42 4.24 0.00 3.93 13.10 4.92 9.05 6.69 6.30 0.00 12.13 19.41 24.61 12.53 23.30 4.05 18.22 8.46 7.16 4.18 24 E6a_E7a KnownJunction 0 143.06 74.92 99.26 85.20 19.52 44.69 39.88 76.69 59.43 61.57 74.44 65.42 6.17 128.38 135.11 105.53 94.16 107.90 70.40 76.06 73.95 38.39 60.61 25 E7_Aa NovelBoundary 0 14.37 22.69 25.96 24.54 19.44 18.74 22.35 15.90 11.40 12.41 19.16 0.00 6.82 17.78 13.60 24.27 18.79 27.03 34.45 25.50 8.40 2.88 15.37 26 ER7a ExonRegion 1 113.04 57.45 97.72 94.04 19.34 41.34 42.91 96.28 66.70 71.79 103.54 64.25 12.15 117.08 153.30 111.66 132.79 103.64 51.04 76.35 63.41 50.81 52.39 27 E7a_E8a KnownJunction 0 141.06 54.00 94.32 112.54 18.51 40.09 54.36 100.88 74.48 72.34 106.34 37.06 26.78 100.18 180.23 125.78 147.73 70.26 55.34 112.17 55.48 69.01 31.93 28 E8_Aa NovelBoundary 0 10.96 6.45 15.08 25.77 7.13 9.26 15.32 7.60 11.02 3.57 4.69 0.00 0.00 2.30 4.82 12.05 9.26 19.69 18.82 9.01 5.50 4.84 11.95 29 ER8a ExonRegion 0 78.88 67.11 96.18 102.58 43.77 41.73 44.01 96.79 73.43 89.16 117.29 28.64 29.76 130.53 145.17 123.95 116.12 83.39 66.44 82.32 81.51 53.53 39.00 30 E8_Da NovelBoundary 0 6.74 0.00 6.21 40.52 0.00 7.38 14.04 29.98 32.90 16.60 2.47 6.30 5.84 2.47 0.00 4.36 0.00 44.98 0.00 33.36 8.90 11.63 3.59 31 E8a_E9a KnownJunction 0 72.90 61.44 92.25 81.67 38.79 54.57 53.35 73.69 71.21 100.20 94.60 44.26 25.49 103.89 179.99 102.11 107.43 93.10 41.13 69.35 73.02 29.88 20.74 32 I8_SR1 SilentIntronRegion 0 3.57 5.86 8.00 13.34 4.21 9.48 10.54 5.70 3.51 5.82 2.17 2.69 2.56 4.10 5.94 8.27 4.08 16.32 8.36 8.93 1.12 1.41 4.24 33 E9_Aa NovelBoundary 0 6.30 5.20 8.25 11.49 0.00 2.16 8.48 5.71 2.69 2.44 2.68 15.30 0.00 9.83 0.00 12.30 11.50 19.19 3.58 9.46 0.00 0.00 4.35 34 ER9a ExonRegion 0 34.26 34.65 91.37 82.58 44.50 45.10 42.45 73.32 59.42 89.77 86.03 51.26 20.61 109.38 132.53 57.64 111.33 78.13 55.92 86.50 72.59 37.84 28.24 35 E9a_E10a KnownJunction 0 46.90 44.33 70.78 100.09 43.55 36.63 37.67 75.78 63.08 86.23 82.49 50.27 23.38 69.46 136.60 47.34 84.34 80.79 64.19 91.59 51.95 45.31 44.39 36 I9 Intron 0 6.04 4.61 8.99 8.00 3.69 7.58 6.13 7.35 2.54 2.52 0.95 2.01 1.60 4.73 6.87 10.53 7.15 17.26 9.72 7.33 2.60 1.03 6.65 37 I9_SR1 SilentIntronRegion 0 6.09 4.65 9.05 8.07 3.72 7.66 6.17 7.43 2.56 2.55 0.96 2.03 1.62 4.78 6.94 10.63 7.22 17.42 9.82 7.40 2.63 1.04 6.71 38 ER10a ExonRegion 0 31.04 37.14 80.80 71.42 14.42 36.69 29.64 62.58 41.23 72.78 60.09 16.34 12.80 96.66 129.98 83.76 77.76 77.07 56.96 63.10 50.59 39.85 38.89 39 E10_Da NovelBoundary 0 10.52 18.15 25.43 35.53 12.82 26.69 25.39 24.69 24.62 28.07 0.00 0.00 0.00 12.71 8.90 34.01 17.39 29.22 21.37 32.60 22.43 13.17 4.35 40 E10a_E11a KnownJunction 0 24.08 27.43 62.59 34.29 3.65 27.09 27.20 50.19 15.45 41.56 67.49 14.70 19.97 88.59 102.60 48.19 93.31 39.01 60.99 62.83 32.49 34.78 11.10 41 I10 Intron 0 21.37 14.75 23.33 33.42 16.60 21.98 14.20 27.09 22.16 23.72 6.50 7.00 8.43 13.83 15.45 18.75 15.97 34.00 41.36 37.25 18.88 10.19 13.89 42 I10_SR1 SilentIntronRegion 0 12.30 12.27 20.03 27.40 13.79 18.70 10.89 16.67 17.76 20.24 4.66 3.85 5.54 14.44 10.18 16.30 12.68 26.19 26.20 34.77 14.01 7.77 9.01 43 I10_AR1 ActiveIntronRegion 0 30.06 17.24 26.67 39.43 19.42 25.30 17.45 37.07 26.51 27.24 8.30 10.00 11.22 13.44 20.53 21.26 19.22 41.68 55.94 40.01 23.64 12.54 18.61 44 I10 Intron 0 11.60 9.95 27.50 27.02 11.89 23.27 14.16 27.68 17.63 22.73 11.16 3.05 4.33 14.50 15.63 14.71 10.10 29.64 24.91 25.59 14.53 6.04 10.47 45 I10_SR1 SilentIntronRegion 0 8.30 5.80 23.51 18.15 6.99 18.59 10.55 24.30 14.54 21.69 10.75 1.91 3.84 16.15 13.54 13.69 11.18 29.59 19.14 20.87 14.42 5.17 10.17 46 I10_AR2 ActiveIntronRegion 0 10.72 10.94 29.76 29.26 12.04 25.19 13.92 24.13 22.90 29.95 12.58 1.94 4.70 16.54 19.74 19.24 10.10 33.45 34.58 28.98 17.19 6.04 9.44 47 I10_SR2 SilentIntronRegion 0 17.31 15.56 38.27 41.83 18.90 31.83 20.60 40.81 16.36 23.51 11.62 5.16 6.17 15.73 15.01 14.62 10.69 29.72 29.85 33.64 13.60 8.43 12.09 48 I10_AR3 ActiveIntronRegion 0 12.65 9.79 21.05 24.96 13.34 19.77 13.77 23.90 20.75 17.58 10.68 4.03 2.76 8.77 17.33 11.65 7.74 28.07 20.65 22.41 14.56 5.00 10.94 49 E11_Aa NovelBoundary 0 0.00 0.00 29.12 31.30 17.06 18.28 8.48 29.98 27.52 28.02 7.21 0.00 0.00 7.42 10.75 7.43 13.18 18.86 17.32 30.94 15.01 5.20 12.29 50 ER11a ExonRegion 0 36.11 24.20 41.46 29.57 16.36 32.03 24.02 30.87 26.78 40.06 36.69 8.12 15.76 44.90 73.37 30.63 43.88 45.06 44.20 33.40 30.80 16.95 15.85