Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL133223.1 Gene 0 0.00 0.05 0.29 0.09 0.00 0.08 0.06 0.23 0.00 0.31 0.13 0.10 0.17 0.06 0.00 0.41 0.15 0.25 0.29 0.00 0.55 0.00 0.00 2 499851 Transcript 0 0.00 0.02 0.28 0.22 0.00 0.03 0.02 0.33 0.00 0.28 0.05 0.04 0.07 0.15 0.00 0.99 0.06 0.34 0.71 0.00 0.32 0.00 0.00 3 ER1a ExonRegion 0 0.00 0.05 0.24 0.00 0.00 0.10 0.07 0.14 0.00 0.27 0.15 0.11 0.20 0.00 0.00 0.00 0.17 0.15 0.00 0.00 0.58 0.00 0.00 4 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 Ix Intron 0 10.61 11.30 8.17 7.81 7.94 4.92 16.29 11.12 6.14 11.63 6.97 9.25 13.81 8.10 8.82 14.56 12.70 24.39 9.70 25.72 8.79 5.29 11.67 6 Ix_AR7 ActiveIntronRegion 0 5.88 10.87 9.65 7.61 8.35 7.09 12.16 10.24 7.06 11.07 8.64 3.54 3.40 9.06 8.22 15.41 11.73 33.05 8.94 25.56 13.28 6.27 11.07 7 Ix_AR6 ActiveIntronRegion 0 7.79 15.37 7.20 8.32 8.28 5.82 14.24 9.53 5.81 11.55 7.44 8.99 10.28 8.22 7.00 15.29 12.99 21.02 9.49 24.71 7.46 6.49 10.46 8 Ix_AR5 ActiveIntronRegion 0 7.49 8.82 5.41 6.11 8.28 5.35 15.11 9.80 6.27 10.43 4.87 9.90 15.39 7.53 8.88 15.38 11.39 20.08 9.58 23.05 7.51 3.78 11.43 9 Ix_SR3 SilentIntronRegion 0 14.98 10.19 9.59 7.20 5.37 3.86 11.20 11.90 4.65 12.83 7.51 8.97 11.99 9.49 13.92 15.42 14.05 30.44 13.78 25.51 8.02 4.53 14.11 10 Ix_AR3 ActiveIntronRegion 0 23.64 17.23 11.79 12.60 11.38 4.35 24.60 17.21 7.59 18.13 7.89 15.66 31.04 8.29 9.00 16.98 11.91 19.22 7.32 32.71 9.30 7.84 10.56 11 Ix_SR2 SilentIntronRegion 0 9.31 8.46 6.91 6.85 7.28 3.36 21.06 10.81 6.20 9.32 6.54 9.21 15.86 6.97 7.85 11.33 14.30 24.82 7.76 25.88 7.66 4.25 13.10 12 Ix_SR1 SilentIntronRegion 0 5.08 5.35 6.37 6.93 6.79 7.19 13.35 4.18 4.04 6.64 2.83 7.92 9.86 4.98 3.05 15.39 1.78 7.83 26.44 17.17 8.27 2.87 3.84 13 Ix_AR1 ActiveIntronRegion 0 4.85 7.22 9.31 5.36 4.33 0.94 16.79 8.24 2.78 6.18 3.60 22.82 6.33 6.66 3.13 4.73 16.41 5.84 9.68 21.15 8.31 1.96 7.46 14 Ix Intron 0 5.42 5.30 3.06 6.15 5.86 4.44 18.65 5.64 4.16 6.96 4.23 9.97 13.54 5.06 3.93 9.83 11.84 10.87 7.86 18.33 4.26 3.15 7.32 15 Ix_SR2 SilentIntronRegion 0 5.36 5.52 3.17 4.96 6.02 3.05 16.66 4.82 4.45 7.17 3.94 8.84 10.05 4.39 4.49 9.65 10.50 13.08 7.23 19.63 4.05 3.61 6.39 16 Ix_AR1 ActiveIntronRegion 0 4.73 6.09 1.75 7.25 5.16 6.41 21.68 7.66 4.46 6.53 5.14 10.27 17.45 5.78 1.44 8.01 16.71 4.53 10.33 17.00 4.05 2.44 8.25 17 Ix_SR1 SilentIntronRegion 0 6.48 3.58 4.22 9.31 6.07 7.35 22.57 6.33 2.74 6.73 4.28 13.86 21.98 6.72 4.79 12.65 11.11 10.14 7.33 15.13 5.30 2.29 9.68 18 Ix Intron 0 11.89 9.27 6.44 10.91 10.35 3.52 18.23 9.88 5.19 9.78 1.29 8.29 11.00 1.49 6.51 8.09 7.23 5.61 4.93 10.48 2.50 1.27 6.79 19 Ix_AR17 ActiveIntronRegion 0 8.95 9.54 0.09 14.68 8.03 0.00 28.21 6.91 6.46 11.12 1.93 4.00 0.00 1.50 5.80 9.14 1.27 16.91 15.44 18.66 0.00 7.53 5.42 20 Ix_AR16 ActiveIntronRegion 0 6.47 8.59 1.23 10.83 9.96 0.00 19.49 7.39 5.90 12.74 1.93 4.33 0.00 0.18 5.80 7.76 1.10 14.78 13.10 16.90 0.86 5.90 6.04 21 Ix_SR12 SilentIntronRegion 0 12.98 9.37 4.92 10.63 12.49 3.01 13.73 5.49 2.94 10.17 2.10 7.26 7.81 2.54 2.82 5.00 7.70 5.53 7.67 8.93 2.55 2.32 8.02 22 Ix_AR14 ActiveIntronRegion 0 18.48 19.32 13.01 15.41 22.74 3.10 9.47 5.19 3.61 14.69 0.00 12.49 11.91 1.06 6.58 2.63 8.25 6.40 6.37 13.42 2.20 3.37 8.36 23 Ix_AR13 ActiveIntronRegion 0 30.19 13.86 8.63 14.79 26.50 4.14 28.59 2.46 2.75 9.42 1.74 8.47 10.09 2.29 5.21 6.05 2.89 4.12 0.51 8.04 1.29 3.56 8.39 24 Ix_AR10 ActiveIntronRegion 0 8.71 6.75 7.87 16.18 8.44 2.66 12.66 4.04 5.91 5.58 2.80 12.15 4.48 0.33 10.90 3.01 10.43 7.95 1.85 13.83 4.71 1.59 3.67 25 Ix_SR9 SilentIntronRegion 0 13.55 12.28 7.70 18.15 13.69 2.15 23.28 9.70 4.56 9.28 1.07 9.29 11.75 2.13 7.40 3.39 5.72 3.18 0.66 9.03 1.32 1.20 5.21 26 Ix_AR9 ActiveIntronRegion 0 13.75 15.76 7.12 18.56 16.58 6.38 15.88 11.90 5.73 13.69 1.70 4.08 3.11 2.15 6.25 11.07 7.95 13.56 8.19 8.89 3.82 0.73 7.37 27 Ix_AR8 ActiveIntronRegion 0 21.57 14.30 10.37 21.92 10.40 5.22 15.65 10.91 7.10 16.13 1.96 11.23 11.46 1.79 9.79 17.58 11.73 13.14 13.00 10.74 4.49 2.08 13.98 28 Ix_AR7 ActiveIntronRegion 0 9.09 6.80 4.80 7.94 12.38 5.83 19.97 4.64 4.83 9.61 0.38 6.74 10.07 2.38 4.32 5.51 10.29 4.57 3.99 12.88 3.14 1.87 7.85 29 Ix_SR6 SilentIntronRegion 0 7.69 3.87 4.12 8.59 3.57 4.14 19.03 6.84 7.08 12.79 0.47 4.28 2.64 2.18 3.64 8.66 11.81 13.31 6.26 7.89 4.86 3.79 11.69 30 Ix_AR6 ActiveIntronRegion 0 6.38 7.93 3.25 14.10 6.27 1.86 19.33 8.05 3.36 9.58 0.98 12.69 7.37 2.26 9.21 14.21 13.65 11.96 6.51 14.29 5.97 2.05 7.95 31 Ix_SR5 SilentIntronRegion 0 14.05 6.65 4.63 7.51 9.04 3.14 21.31 7.45 4.43 8.03 1.61 12.38 12.62 1.63 5.43 8.54 7.64 4.48 3.93 11.90 2.46 1.48 6.00 32 Ix_SR4 SilentIntronRegion 0 11.59 12.22 6.19 7.97 10.25 4.54 18.13 11.82 2.71 9.80 1.32 3.29 11.28 1.71 7.42 7.84 7.21 4.50 5.89 11.87 3.01 0.76 8.34 33 Ix_AR4 ActiveIntronRegion 0 6.62 4.43 3.53 7.54 9.99 3.59 13.14 8.66 3.69 5.59 0.00 0.00 4.24 1.31 4.60 12.96 1.79 4.15 4.13 8.60 5.98 1.13 8.93 34 Ix_AR3 ActiveIntronRegion 0 18.62 31.02 6.76 10.19 9.22 1.40 19.53 17.33 7.71 20.55 1.61 17.12 32.07 0.00 5.47 13.71 4.13 2.50 2.22 10.77 0.71 0.63 7.00 35 Ix_SR2 SilentIntronRegion 0 23.31 15.14 10.55 16.57 14.57 4.54 22.55 18.06 10.72 16.32 1.98 10.84 17.81 1.51 10.77 11.82 10.76 8.21 6.08 16.06 3.38 1.96 9.02 36 Ix_AR2 ActiveIntronRegion 0 6.61 14.03 4.20 6.26 7.81 7.19 11.21 10.19 6.15 8.45 0.95 0.00 1.44 0.00 10.72 4.25 8.35 0.98 4.42 14.33 0.85 3.40 7.01 37 Ix_SR1 SilentIntronRegion 0 6.81 6.96 6.48 9.41 8.86 2.41 17.93 9.86 4.90 8.08 0.78 7.36 10.81 1.03 5.96 6.04 6.04 3.33 4.91 9.00 1.51 0.63 5.75 38 ER2a ExonRegion 0 0.00 0.00 0.61 0.67 0.00 0.00 0.00 0.85 0.00 0.57 0.00 0.00 0.00 0.44 0.00 2.96 0.00 0.88 2.12 0.00 0.37 0.00 0.00