Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL132709.7 Gene 0 4.91 13.94 17.48 36.85 13.75 2.22 87.95 11.94 1.48 9.99 3.31 3.31 6.81 2.38 8.29 4.49 5.65 16.50 53.63 63.71 15.76 7.35 7.70 2 423708 Transcript 0 8.42 12.51 7.91 16.05 12.71 4.62 46.01 7.41 2.76 5.99 7.58 6.90 14.19 4.73 17.26 9.29 11.76 11.14 29.64 40.96 11.86 10.70 14.53 3 IG27 Intergenic 0 2.45 22.15 27.43 61.68 26.94 0.00 173.94 15.73 0.61 13.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.23 65.19 79.71 13.83 3.78 4.37 4 IG27_SR1 SilentIntergenicRegion 0 1.17 9.02 9.11 29.27 10.38 0.00 84.40 5.71 1.02 7.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.38 74.16 66.05 24.43 3.46 13.02 5 IG27_AR1 ActiveIntergenicRegion 0 3.00 27.85 35.35 75.77 34.12 0.00 212.88 20.07 0.43 16.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.82 61.66 85.90 9.38 3.94 0.71 6 ER1a ExonRegion 0 1.27 11.67 20.13 42.86 11.24 0.00 97.29 12.34 0.23 10.46 0.00 0.00 0.00 0.16 0.00 0.05 0.00 17.44 57.96 64.78 14.80 3.25 1.06 7 E1_Da NovelBoundary 0 22.30 5.39 17.80 62.93 33.11 7.33 91.06 18.07 8.54 8.78 11.79 0.00 0.00 2.30 5.19 0.00 3.93 122.66 161.98 49.60 24.53 5.14 20.15 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.81 0.00 0.00 0.00 2.05 0.00 0.00 0.00 0.00 0.00 0.00 4.39 0.00 0.00 0.00 0.00 0.00 9 Ix Intron 0 2.45 13.61 12.77 40.25 13.83 0.36 116.62 11.52 0.61 9.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.72 39.27 66.70 9.78 2.49 3.02 10 Ix_SR1 SilentIntronRegion 0 2.46 13.62 12.78 40.28 13.84 0.36 116.69 11.53 0.61 9.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.73 39.29 66.75 9.78 2.49 3.02 11 Ix Intron 0 1.08 8.52 8.96 24.70 7.93 0.00 94.18 6.32 0.75 5.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.05 34.51 58.06 13.74 1.92 3.00 12 Ix_SR1 SilentIntronRegion 0 1.09 8.56 8.99 24.80 7.96 0.00 94.54 6.34 0.76 5.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21.13 34.65 58.28 13.78 1.92 3.01 13 Ix Intron 0 1.23 3.24 5.03 13.83 5.04 0.00 66.57 3.73 0.00 2.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 12.92 21.58 1.91 0.30 1.28 14 Ix_SR1 SilentIntronRegion 0 1.23 3.25 5.06 13.91 5.07 0.00 66.95 3.75 0.00 2.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.30 13.00 21.70 1.92 0.30 1.28 15 Ix Intron 0 1.27 3.97 7.40 17.06 8.03 0.00 80.23 5.80 0.00 2.31 0.00 1.07 0.00 0.00 0.00 0.00 0.00 2.90 21.99 28.42 3.31 1.56 1.32 16 Ix_SR1 SilentIntronRegion 0 1.28 3.99 7.44 17.16 8.07 0.00 80.71 5.83 0.00 2.32 0.00 1.08 0.00 0.00 0.00 0.00 0.00 2.92 22.12 28.59 3.32 1.57 1.33 17 Ix Intron 0 0.35 9.12 11.98 17.54 4.67 0.46 59.83 4.92 0.31 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.96 10.85 20.68 2.56 1.04 1.46 18 Ix_SR1 SilentIntronRegion 0 0.35 9.14 12.00 17.57 4.67 0.46 59.93 4.93 0.31 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.97 10.86 20.71 2.57 1.04 1.47 19 E2_Aa NovelBoundary 0 1087.16 1008.24 602.17 704.14 847.96 594.15 1101.11 790.68 724.88 673.32 442.59 212.77 157.29 108.89 168.61 858.24 688.17 891.29 1076.64 867.36 470.31 573.15 799.34 20 ER2a ExonRegion 0 23.99 25.86 3.59 5.30 26.89 13.86 38.93 9.88 8.04 7.52 20.69 20.69 42.56 14.02 51.79 27.81 35.29 11.59 30.95 58.10 20.79 28.86 42.53