Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TMEM179 Gene 0 1.68 19.04 68.03 0.40 0.08 33.72 16.18 27.90 21.09 64.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73.44 43.61 24.98 0.00 0.00 0.17 2 341595 Transcript 0 0.89 13.89 25.10 0.34 0.00 18.12 13.71 11.86 7.94 21.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.18 15.80 12.22 0.00 0.00 0.00 3 415614 Transcript 0 1.20 28.88 169.83 1.06 0.00 48.43 19.46 53.66 43.96 131.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 140.28 60.44 46.85 0.00 0.00 0.42 4 ER1a ExonRegion 0 2.67 19.17 68.39 0.00 0.00 46.06 10.55 32.77 22.22 77.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 75.96 65.32 27.95 0.00 0.00 0.00 5 E1_Da NovelBoundary 0 0.00 0.00 7.42 0.00 0.00 2.90 0.00 4.76 6.66 15.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37.64 17.41 0.00 0.00 0.00 0.00 6 E1a_E2a KnownJunction 0 0.00 28.81 146.80 0.00 0.00 204.54 23.80 62.23 46.01 142.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 86.10 84.05 48.64 0.00 0.00 0.00 7 I1 Intron 0 0.86 7.09 17.58 0.00 0.00 8.76 7.76 7.04 5.90 22.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.55 22.48 14.11 0.00 0.00 0.02 8 I1_SR1 SilentIntronRegion 0 0.86 7.09 17.59 0.00 0.00 8.76 7.76 7.04 5.90 22.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44.56 22.49 14.12 0.00 0.00 0.02 9 E2_Aa NovelBoundary 0 3.11 5.33 16.68 0.00 0.00 2.27 5.87 22.47 9.17 33.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48.87 9.41 14.45 0.00 0.00 0.00 10 ER2a ExonRegion 0 3.51 41.85 203.40 0.86 0.99 94.59 37.55 81.88 62.27 183.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 253.72 132.68 66.00 0.00 0.00 0.23 11 E2a_E3a KnownJunction 0 3.78 17.56 253.13 1.40 0.00 26.69 16.65 92.05 77.26 231.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 252.20 160.29 55.67 0.00 0.00 3.59 12 ER3a ExonRegion 0 3.51 31.17 250.55 2.02 0.00 53.57 26.14 84.67 73.78 223.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 256.65 115.68 80.82 0.00 0.00 1.49 13 E3_Da KnownBoundary 0 0.00 6.71 17.71 2.06 0.00 7.78 4.11 15.24 16.03 28.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.83 23.25 11.95 0.00 0.00 0.00 14 E3a_E4a KnownJunction 0 0.00 30.85 198.13 1.70 0.00 47.02 18.50 58.04 44.59 129.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 182.31 49.13 53.37 0.00 0.00 0.00 15 ER3b ExonRegion 0 0.89 13.89 25.10 0.34 0.00 18.12 13.71 11.86 7.94 21.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32.18 15.80 12.22 0.00 0.00 0.00 16 E3_Db NovelBoundary 0 0.00 54.40 55.00 0.00 0.00 51.67 32.24 34.91 11.83 36.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.63 21.18 6.20 0.00 0.00 0.00 17 I3 Intron 0 1.02 11.74 34.48 0.73 0.00 17.87 8.28 16.11 8.85 19.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.60 19.92 7.42 0.00 0.00 0.00 18 I3_SR1 SilentIntronRegion 0 1.03 11.85 34.81 0.74 0.00 18.04 8.36 16.26 8.93 20.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.89 20.11 7.49 0.00 0.00 0.00 19 E4_Aa NovelBoundary 0 0.00 12.50 29.30 0.00 0.00 9.71 9.67 2.18 6.19 22.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.05 28.80 6.07 0.00 0.00 0.00 20 ER4a ExonRegion 0 2.40 26.91 141.53 0.42 0.00 49.85 20.41 49.29 43.34 133.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 98.25 71.74 40.33 0.00 0.00 0.83 21 IG43 Intergenic 0 6.72 57.47 119.70 0.28 0.00 60.89 26.04 55.68 36.56 106.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 88.76 54.62 34.88 0.12 0.40 0.00 22 IG43_SR4 SilentIntergenicRegion 0 3.37 25.27 29.52 0.00 0.00 26.06 14.78 12.39 14.51 36.88 0.00 0.00 0.00 0.00 0.00 0.00 0.00 56.34 24.39 21.23 0.00 0.00 0.00 23 IG43_AR4 ActiveIntergenicRegion 0 1.25 32.08 59.97 0.00 0.00 43.67 15.02 28.78 23.06 60.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 88.69 48.69 27.88 0.00 0.00 0.00 24 IG43_SR3 SilentIntergenicRegion 0 4.64 43.66 94.77 0.00 0.00 64.99 28.82 45.00 38.47 96.95 0.00 0.00 0.00 0.00 0.00 0.00 0.00 86.58 54.31 30.68 0.00 0.84 0.00 25 IG43_AR3 ActiveIntergenicRegion 0 9.40 105.28 183.00 0.00 0.00 128.45 57.25 101.95 68.53 178.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 189.19 111.11 58.59 0.00 0.65 0.00 26 IG43_AR2 ActiveIntergenicRegion 0 11.60 92.20 206.55 0.67 0.00 87.55 36.95 89.75 55.48 170.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 130.19 80.22 57.11 0.27 0.60 0.00 27 IG43_SR1 SilentIntergenicRegion 0 2.68 29.69 20.83 0.00 0.00 71.15 12.45 31.34 16.39 34.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.85 38.01 3.97 0.00 0.00 0.00