Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AB019438.4 Gene 0 9.52 56.68 53.54 46.54 54.62 3.92 72.32 46.33 2.32 78.92 0.06 2.26 1.92 0.94 1.96 0.53 0.43 27.80 80.27 42.56 0.50 0.20 0.81 2 433371 Transcript 0 1.80 5.60 3.76 3.52 7.77 1.24 8.10 4.61 0.22 15.97 0.00 0.45 0.36 0.17 0.32 0.08 0.08 6.38 2.97 11.32 0.04 0.00 0.10 3 449670 Transcript 0 0.00 4.51 0.00 2.78 19.21 0.46 41.96 11.65 0.00 15.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 2.29 0.00 0.00 0.00 4 334298 Transcript 0 19.06 118.89 102.53 77.21 138.44 6.21 163.67 82.53 3.48 130.24 0.07 1.89 1.66 0.81 1.66 0.50 0.31 39.69 149.24 70.54 0.50 0.23 0.77 5 IG48 Intergenic 0 1.10 3.61 6.55 5.76 9.18 0.33 14.98 7.53 0.30 25.65 0.00 0.00 0.00 0.00 0.00 0.00 1.72 5.14 7.49 7.29 0.00 0.00 0.00 6 IG48_AR1 ActiveIntergenicRegion 0 0.47 0.42 1.65 1.35 0.59 1.22 3.59 3.32 0.47 5.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.10 4.24 8.94 0.00 0.00 0.00 7 IG48_AR3 ActiveIntergenicRegion 0 3.36 21.88 40.46 35.42 50.23 1.45 59.76 46.58 0.98 146.69 0.00 0.00 0.00 0.00 0.00 0.00 1.73 3.16 41.21 30.36 0.00 0.00 0.00 8 IG48_SR4 SilentIntergenicRegion 0 0.00 2.03 0.00 4.71 2.68 0.00 2.41 10.21 0.00 30.76 0.00 0.00 0.00 0.00 0.00 0.00 2.10 3.02 0.00 7.74 0.00 0.00 0.00 9 IG48_AR4 ActiveIntergenicRegion 0 2.77 5.84 1.28 1.47 26.81 0.60 25.84 4.82 0.00 20.80 0.00 0.00 0.00 0.00 0.00 0.00 0.93 1.59 7.29 4.32 0.00 0.00 0.00 10 IG48_AR6 ActiveIntergenicRegion 0 0.00 0.00 1.23 4.09 8.03 0.00 18.54 0.00 0.00 12.62 0.00 0.00 0.00 0.00 0.00 0.00 3.30 1.85 6.37 12.77 0.00 0.00 0.00 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.96 0.00 0.00 0.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 ER1b ExonRegion 0 1.56 8.46 0.00 0.00 2.96 0.00 18.19 0.00 0.00 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.69 2.35 0.00 0.00 0.00 13 ER1c ExonRegion 0 5.88 59.81 19.26 9.61 27.12 4.40 105.70 18.27 1.29 33.29 0.00 0.00 0.00 0.00 0.00 0.00 0.99 12.20 56.16 35.69 0.00 0.00 0.00 14 E1a_E2a KnownJunction 0 3.78 22.43 30.25 26.34 20.63 0.00 34.49 37.91 1.65 52.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.15 51.11 55.29 0.00 0.00 0.00 15 E1a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2a ExonRegion 0 5.89 42.23 65.36 51.22 78.62 8.13 88.17 80.60 4.04 119.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.44 129.52 82.21 0.00 0.00 0.00 17 E2a_E3a KnownJunction 0 0.00 6.12 0.00 2.73 20.80 0.00 57.59 14.01 0.00 20.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.13 0.00 0.00 0.00 18 E2a_E4a KnownJunction 0 20.82 131.88 100.79 63.33 184.30 5.79 206.99 82.39 2.92 134.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34.82 145.60 79.26 0.00 0.00 0.00 19 E2a_E5a NovelJunction 0 0.00 3.35 0.00 1.37 8.66 0.00 23.32 0.00 1.27 15.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.97 8.66 15.34 0.00 0.00 0.00 20 ER3a ExonRegion 0 0.00 2.90 0.00 2.83 17.62 0.93 26.32 9.29 0.00 11.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.65 0.00 1.45 0.00 0.00 0.00 21 E3_Da NovelBoundary 0 3.11 3.29 1.09 4.73 24.79 0.00 22.70 20.33 0.00 13.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.85 30.12 14.51 0.00 0.00 0.00 22 I3 Intron 0 0.52 3.92 2.29 3.91 10.31 1.29 30.40 12.84 0.62 19.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.03 9.54 6.70 0.00 0.00 0.00 23 I3_SR1 SilentIntronRegion 0 0.48 0.97 1.49 1.38 6.64 0.58 17.51 3.08 0.58 5.52 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.01 5.66 4.56 0.00 0.00 0.00 24 I3_AR1 ActiveIntronRegion 0 0.44 1.67 1.74 2.78 7.91 0.30 27.48 9.40 0.51 15.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.34 5.08 9.18 0.00 0.00 0.00 25 I3_SR2 SilentIntronRegion 0 0.56 5.08 2.63 4.71 11.82 1.70 34.01 15.57 0.68 23.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.52 11.63 6.54 0.00 0.00 0.00 26 E4_Aa NovelBoundary 0 7.19 22.17 4.38 15.05 12.05 0.00 33.65 22.22 1.79 30.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 0.00 3.26 0.00 0.00 0.00 27 ER4a ExonRegion 0 17.31 105.90 104.26 91.10 92.58 6.62 120.35 82.66 4.03 125.72 0.15 3.77 3.31 1.63 3.32 1.00 0.62 44.55 152.87 61.82 0.99 0.47 1.54 28 E4_Da NovelBoundary 0 10.74 21.58 14.99 7.19 43.38 5.11 51.14 23.00 0.00 23.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.15 49.32 11.38 0.00 0.00 0.00 29 ER5a ExonRegion 0 0.68 2.95 0.45 2.09 4.72 0.43 11.10 4.75 0.50 16.05 0.00 1.95 1.32 0.73 2.24 0.20 0.23 19.36 5.89 23.77 0.30 0.00 0.40 30 E5a_E6a KnownJunction 0 3.41 2.89 1.83 0.00 0.00 4.77 0.00 2.38 0.00 7.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.16 0.00 21.48 0.00 0.00 0.00 31 ER6a ExonRegion 0 0.35 4.40 0.74 2.38 4.82 2.64 6.82 2.96 0.00 11.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.90 1.93 14.75 0.00 0.00 0.00 32 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 I6 Intron 0 1.88 4.05 1.59 0.81 6.69 0.30 14.12 5.41 0.37 12.60 1.44 5.42 0.52 0.65 0.00 0.70 0.00 15.94 7.96 21.19 0.00 0.00 0.00 34 I6_AR1 ActiveIntronRegion 0 0.00 0.81 0.00 0.79 1.09 0.00 9.85 1.58 0.00 4.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.88 8.26 18.96 0.00 0.00 0.00 35 I6_SR1 SilentIntronRegion 0 0.90 3.34 0.22 0.40 4.86 0.34 12.79 4.04 0.34 9.62 0.11 0.00 0.00 0.00 0.00 0.00 0.00 11.26 11.26 18.38 0.00 0.00 0.00 36 I6_AR2 ActiveIntronRegion 0 4.09 5.56 0.33 0.74 3.25 0.24 14.60 4.57 0.47 11.28 1.02 5.73 0.00 0.71 0.00 1.53 0.00 20.61 8.11 16.41 0.00 0.00 0.00 37 I6_SR2 SilentIntronRegion 0 1.84 3.15 3.62 1.08 8.89 0.20 14.68 7.28 0.48 15.08 3.78 9.62 0.72 1.44 0.00 1.45 0.00 19.74 5.74 25.20 0.00 0.00 0.00 38 I6_AR3 ActiveIntronRegion 0 2.32 8.11 1.73 1.44 10.43 0.00 14.23 5.81 0.29 15.70 0.00 10.19 2.04 0.53 0.00 0.00 0.00 7.98 5.84 20.33 0.00 0.00 0.00 39 I6_SR3 SilentIntronRegion 0 1.99 1.63 0.60 0.00 6.73 1.92 20.33 5.54 0.00 15.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.89 8.81 29.57 0.00 0.00 0.00 40 I6 Intron 0 1.05 7.28 1.58 2.36 12.30 0.47 25.64 7.94 0.58 28.68 0.14 0.00 0.00 0.00 0.00 0.00 0.00 18.18 14.82 22.55 0.00 0.00 0.00 41 I6_SR1 SilentIntronRegion 0 1.06 7.31 1.59 2.37 12.34 0.48 25.72 7.97 0.58 28.78 0.14 0.00 0.00 0.00 0.00 0.00 0.00 18.23 14.87 22.62 0.00 0.00 0.00 42 I6 Intron 0 4.55 20.22 9.21 9.94 28.98 0.82 37.91 19.68 0.48 57.12 0.00 0.00 0.00 0.00 0.00 0.00 0.24 34.45 24.22 21.70 0.00 0.00 0.00 43 I6_AR1 ActiveIntronRegion 0 0.99 12.09 6.97 6.28 12.67 0.37 19.78 14.46 0.90 43.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.86 17.44 25.09 0.00 0.00 0.00 44 I6_AR2 ActiveIntronRegion 0 2.12 12.20 3.68 6.13 24.08 0.00 40.60 19.30 2.47 56.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48.04 28.67 42.20 0.00 0.00 0.00 45 I6_SR1 SilentIntronRegion 0 5.39 22.15 9.77 10.82 32.77 0.92 42.09 20.90 0.37 60.39 0.00 0.00 0.00 0.00 0.00 0.00 0.30 35.01 25.78 20.84 0.00 0.00 0.00 46 Ix Intron 0 3.17 11.18 4.57 0.00 22.74 2.75 31.11 7.73 0.00 18.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.26 9.56 11.70 0.00 0.00 0.00 47 Ix_SR1 SilentIntronRegion 0 3.24 11.41 4.63 0.00 23.20 2.81 31.74 7.86 0.00 19.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.54 9.75 11.91 0.00 0.00 0.00 48 I6 Intron 0 8.68 27.37 9.02 11.53 45.00 0.58 37.73 13.00 1.16 44.58 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.99 7.70 13.65 0.00 0.00 0.00 49 I6_SR1 SilentIntronRegion 0 8.72 27.48 9.06 11.58 45.19 0.58 37.88 13.05 1.17 44.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.03 7.74 13.70 0.00 0.00 0.00 50 E7_Aa NovelBoundary 0 16.37 72.36 47.04 47.05 34.55 0.00 60.72 38.49 5.18 142.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.42 28.05 28.12 0.00 0.00 0.00 51 ER7a ExonRegion 0 8.18 28.93 23.32 20.16 44.88 0.81 37.83 22.16 1.02 75.81 0.00 1.18 1.22 0.44 0.00 0.33 0.36 8.21 12.98 19.21 0.00 0.00 0.32